Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1429
(730 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VC26 Cluster: CG31119-PA; n=5; Diptera|Rep: CG31119-P... 45 0.002
UniRef50_Q944K3 Cluster: Histone deacetylase 2; n=7; Magnoliophy... 45 0.002
UniRef50_UPI0000E1FBE4 Cluster: PREDICTED: hypothetical protein;... 40 0.062
UniRef50_Q15WQ0 Cluster: Histone deacetylase superfamily; n=3; G... 40 0.062
UniRef50_Q96DB2 Cluster: Histone deacetylase 11; n=22; Eumetazoa... 40 0.062
UniRef50_Q00UC4 Cluster: Histone deacetylase superfamily; n=2; O... 38 0.25
UniRef50_Q4PCR1 Cluster: Putative uncharacterized protein; n=1; ... 37 0.58
UniRef50_Q2LVD3 Cluster: Histone deacetylase family protein; n=1... 36 0.77
UniRef50_Q232Y2 Cluster: Histone deacetylase family protein; n=1... 36 1.0
UniRef50_Q5QWS4 Cluster: Histone deacetylase/AcuC/AphA family pr... 36 1.3
UniRef50_Q22CW6 Cluster: Histone deacetylase family protein; n=1... 36 1.3
UniRef50_Q1AYS6 Cluster: Histone deacetylase superfamily; n=1; R... 35 1.8
UniRef50_Q1PVG5 Cluster: Similar to histone deacetylase; n=1; Ca... 35 2.3
UniRef50_Q2IF50 Cluster: Histone deacetylase superfamily; n=1; A... 34 4.1
UniRef50_Q17CU3 Cluster: Histone deacetylase; n=2; Aedes aegypti... 33 5.4
UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: L... 33 5.4
UniRef50_A4VDD9 Cluster: Histone deacetylase 1, 2 ,3; n=4; Oligo... 33 5.4
UniRef50_A0C8R8 Cluster: Chromosome undetermined scaffold_159, w... 33 5.4
UniRef50_Q5KL48 Cluster: Histone deacetylase clr3, putative; n=1... 33 5.4
UniRef50_Q8D858 Cluster: Histone deacetylase/AcuC/AphA family pr... 33 7.2
UniRef50_A3CT27 Cluster: Histone deacetylase superfamily; n=2; M... 33 7.2
UniRef50_Q8F7M9 Cluster: Histone deacetylase family protein; n=4... 33 9.5
>UniRef50_Q9VC26 Cluster: CG31119-PA; n=5; Diptera|Rep: CG31119-PA -
Drosophila melanogaster (Fruit fly)
Length = 343
Score = 44.8 bits (101), Expect = 0.002
Identities = 18/29 (62%), Positives = 24/29 (82%)
Frame = +1
Query: 616 LKAAFNEFKPDIVVYNAGTDILDTDPLGH 702
L + EF+PD+VVYNAGTD+L+ DPLG+
Sbjct: 259 LMQSLAEFRPDMVVYNAGTDVLEGDPLGN 287
>UniRef50_Q944K3 Cluster: Histone deacetylase 2; n=7;
Magnoliophyta|Rep: Histone deacetylase 2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 387
Score = 44.8 bits (101), Expect = 0.002
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = +1
Query: 616 LKAAFNEFKPDIVVYNAGTDILDTDPLG 699
L+ A F+P++V+YNAGTDILD DPLG
Sbjct: 299 LEVASRNFQPELVIYNAGTDILDGDPLG 326
>UniRef50_UPI0000E1FBE4 Cluster: PREDICTED: hypothetical protein;
n=3; Mammalia|Rep: PREDICTED: hypothetical protein - Pan
troglodytes
Length = 530
Score = 39.9 bits (89), Expect = 0.062
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = +1
Query: 616 LKAAFNEFKPDIVVYNAGTDILDTDPLG 699
+K + E PD+VVYNAGTDIL+ D LG
Sbjct: 425 IKKSLQEHLPDVVVYNAGTDILEGDRLG 452
>UniRef50_Q15WQ0 Cluster: Histone deacetylase superfamily; n=3;
Gammaproteobacteria|Rep: Histone deacetylase superfamily
- Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 306
Score = 39.9 bits (89), Expect = 0.062
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +1
Query: 616 LKAAFNEFKPDIVVYNAGTDILDTDPLGH 702
L AF EF+PD V+Y+AG DI D LGH
Sbjct: 222 LSQAFTEFQPDAVIYDAGVDIHINDDLGH 250
>UniRef50_Q96DB2 Cluster: Histone deacetylase 11; n=22;
Eumetazoa|Rep: Histone deacetylase 11 - Homo sapiens
(Human)
Length = 347
Score = 39.9 bits (89), Expect = 0.062
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = +1
Query: 616 LKAAFNEFKPDIVVYNAGTDILDTDPLG 699
+K + E PD+VVYNAGTDIL+ D LG
Sbjct: 242 IKKSLQEHLPDVVVYNAGTDILEGDRLG 269
>UniRef50_Q00UC4 Cluster: Histone deacetylase superfamily; n=2;
Ostreococcus|Rep: Histone deacetylase superfamily -
Ostreococcus tauri
Length = 351
Score = 37.9 bits (84), Expect = 0.25
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +1
Query: 607 SGILKAAFNEFKPDIVVYNAGTDILDTDPLGH 702
S L+ + +F+P++V+Y+AG D+ D LGH
Sbjct: 259 SSALRESLEDFRPELVIYDAGVDVTANDALGH 290
>UniRef50_Q4PCR1 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 727
Score = 36.7 bits (81), Expect = 0.58
Identities = 13/36 (36%), Positives = 25/36 (69%)
Frame = +1
Query: 592 FIFDFSGILKAAFNEFKPDIVVYNAGTDILDTDPLG 699
+++ F+ ++ +EF+PD+V+ +AG D D DP+G
Sbjct: 322 YLYAFNHLVMPIAHEFQPDLVIISAGFDAADGDPIG 357
>UniRef50_Q2LVD3 Cluster: Histone deacetylase family protein; n=1;
Syntrophus aciditrophicus SB|Rep: Histone deacetylase
family protein - Syntrophus aciditrophicus (strain SB)
Length = 350
Score = 36.3 bits (80), Expect = 0.77
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +1
Query: 604 FSGILKAAFNEFKPDIVVYNAGTDILDTDPLG 699
F ILK+ EF PD+++ +AG DI DPLG
Sbjct: 227 FEKILKSIAPEFSPDLILVSAGFDIYGGDPLG 258
>UniRef50_Q232Y2 Cluster: Histone deacetylase family protein; n=1;
Tetrahymena thermophila SB210|Rep: Histone deacetylase
family protein - Tetrahymena thermophila SB210
Length = 458
Score = 35.9 bits (79), Expect = 1.0
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +1
Query: 616 LKAAFNEFKPDIVVYNAGTDILDTDPLG 699
L+ ++FKP+ ++YNAGTD L+ D LG
Sbjct: 364 LQKILDQFKPEFLLYNAGTDCLEGDRLG 391
>UniRef50_Q5QWS4 Cluster: Histone deacetylase/AcuC/AphA family
protein; n=2; Idiomarina|Rep: Histone
deacetylase/AcuC/AphA family protein - Idiomarina
loihiensis
Length = 311
Score = 35.5 bits (78), Expect = 1.3
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +1
Query: 634 EFKPDIVVYNAGTDILDTDPLGH 702
E KPD+++Y+AG DI D LGH
Sbjct: 225 EIKPDLILYDAGVDIYQRDELGH 247
>UniRef50_Q22CW6 Cluster: Histone deacetylase family protein; n=1;
Tetrahymena thermophila SB210|Rep: Histone deacetylase
family protein - Tetrahymena thermophila SB210
Length = 359
Score = 35.5 bits (78), Expect = 1.3
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +1
Query: 592 FIFDFSGILKAAFNEFKPDIVVYNAGTDILDTDPLGH*A*VNVG 723
+I+ F I+ A EF+PD + +AG D D LG N+G
Sbjct: 239 YIYAFESIVMPALTEFQPDFIFISAGFDSAANDKLGRCQLTNIG 282
>UniRef50_Q1AYS6 Cluster: Histone deacetylase superfamily; n=1;
Rubrobacter xylanophilus DSM 9941|Rep: Histone
deacetylase superfamily - Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129)
Length = 342
Score = 35.1 bits (77), Expect = 1.8
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 604 FSGILKAAFNEFKPDIVVYNAGTDILDTDPLG 699
F G+L EF P++VV +AG D +DPLG
Sbjct: 223 FGGVLLPVLEEFAPELVVVSAGYDAHASDPLG 254
>UniRef50_Q1PVG5 Cluster: Similar to histone deacetylase; n=1;
Candidatus Kuenenia stuttgartiensis|Rep: Similar to
histone deacetylase - Candidatus Kuenenia
stuttgartiensis
Length = 313
Score = 34.7 bits (76), Expect = 2.3
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +1
Query: 604 FSGILKAAFNEFKPDIVVYNAGTDILDTDPLG 699
FSG+++ + N F P+ ++ ++G D DP+G
Sbjct: 225 FSGVIEGSVNRFAPEFIILSSGFDAYKKDPIG 256
>UniRef50_Q2IF50 Cluster: Histone deacetylase superfamily; n=1;
Anaeromyxobacter dehalogenans 2CP-C|Rep: Histone
deacetylase superfamily - Anaeromyxobacter dehalogenans
(strain 2CP-C)
Length = 324
Score = 33.9 bits (74), Expect = 4.1
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +1
Query: 604 FSGILKAAFNEFKPDIVVYNAGTDILDTDPLG 699
F L AA EF+PD+V+ +AG D L+ DP G
Sbjct: 235 FEDGLAAALAEFRPDLVLLSAGFDPLEGDPEG 266
>UniRef50_Q17CU3 Cluster: Histone deacetylase; n=2; Aedes
aegypti|Rep: Histone deacetylase - Aedes aegypti
(Yellowfever mosquito)
Length = 355
Score = 33.5 bits (73), Expect = 5.4
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 592 FIFDFSGILKAAFNEFKPDIVVYNAGTDILDTDPLG 699
F+ F + A ++ F+PD+ + G D++ DPLG
Sbjct: 214 FVPYFQSVATAVYDAFEPDVCIVQCGGDVMVGDPLG 249
>UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: Like
moricin - Manduca sexta (Tobacco hawkmoth) (Tobacco
hornworm)
Length = 248
Score = 33.5 bits (73), Expect = 5.4
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +1
Query: 448 MSDGNHSPSGWPYARLSMR 504
M DGNHSPSG PYA L R
Sbjct: 1 MGDGNHSPSGRPYASLPTR 19
>UniRef50_A4VDD9 Cluster: Histone deacetylase 1, 2 ,3; n=4;
Oligohymenophorea|Rep: Histone deacetylase 1, 2 ,3 -
Tetrahymena thermophila SB210
Length = 473
Score = 33.5 bits (73), Expect = 5.4
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 604 FSGILKAAFNEFKPDIVVYNAGTDILDTDPLGH 702
F ++ ++PD+VV+ G D L D +GH
Sbjct: 259 FKNVMNKVMEVYRPDVVVFQTGADSLANDKIGH 291
>UniRef50_A0C8R8 Cluster: Chromosome undetermined scaffold_159,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_159,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 366
Score = 33.5 bits (73), Expect = 5.4
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1
Query: 646 DIVVYNAGTDILDTDPLGH 702
+ ++YNAGTDI+ DPLGH
Sbjct: 297 EFLIYNAGTDIMAGDPLGH 315
>UniRef50_Q5KL48 Cluster: Histone deacetylase clr3, putative; n=1;
Filobasidiella neoformans|Rep: Histone deacetylase clr3,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 737
Score = 33.5 bits (73), Expect = 5.4
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 592 FIFDFSGILKAAFNEFKPDIVVYNAGTDILDTDPLG 699
+I+ F I+ EF PD+V+ +AG D D D LG
Sbjct: 307 YIYAFQRIIMPIAYEFDPDLVIISAGFDAADGDMLG 342
>UniRef50_Q8D858 Cluster: Histone deacetylase/AcuC/AphA family
protein; n=31; Gammaproteobacteria|Rep: Histone
deacetylase/AcuC/AphA family protein - Vibrio vulnificus
Length = 312
Score = 33.1 bits (72), Expect = 7.2
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 592 FIFDFSGILKAAFNEFKPDIVVYNAGTDILDTDPLGH 702
F+ F ++ A +PD+++Y+AG DI D LG+
Sbjct: 215 FLAAFKEVVPMAIRLHQPDLIIYDAGVDIHHEDELGY 251
>UniRef50_A3CT27 Cluster: Histone deacetylase superfamily; n=2;
Methanoculleus marisnigri JR1|Rep: Histone deacetylase
superfamily - Methanoculleus marisnigri (strain ATCC
35101 / DSM 1498 / JR1)
Length = 330
Score = 33.1 bits (72), Expect = 7.2
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +1
Query: 604 FSGILKAAFNEFKPDIVVYNAGTDILDTDPLG 699
FS + F+PD+VV +AG D L DPLG
Sbjct: 220 FSRVFVPMLRWFEPDVVVVSAGQDALFDDPLG 251
>UniRef50_Q8F7M9 Cluster: Histone deacetylase family protein; n=4;
Leptospira|Rep: Histone deacetylase family protein -
Leptospira interrogans
Length = 313
Score = 32.7 bits (71), Expect = 9.5
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +1
Query: 592 FIFDFSGILKAAFNEFKPDIVVYNAGTDILDTDPLG 699
+I F I+ F+PDIV+ +AG D DPLG
Sbjct: 222 YIQKFKEIIVPTMERFEPDIVLISAGFDAHKNDPLG 257
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 689,946,220
Number of Sequences: 1657284
Number of extensions: 13204994
Number of successful extensions: 26898
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 25915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26884
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 58853922985
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -