Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1428
(743 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D56B03 Cluster: PREDICTED: hypothetical protein;... 52 1e-05
UniRef50_Q6N286 Cluster: Possible aliphatic sulfonate binding pr... 36 0.80
UniRef50_A5FNK2 Cluster: Major facilitator superfamily MFS_1; n=... 34 3.2
UniRef50_A1TA01 Cluster: PE-PGRS family protein; n=1; Mycobacter... 34 3.2
UniRef50_Q3JUT9 Cluster: Putative uncharacterized protein; n=1; ... 31 3.7
UniRef50_Q97QN5 Cluster: Probable multidrug resistance protein n... 34 4.2
UniRef50_Q8CV99 Cluster: Putative uncharacterized protein OB0858... 33 7.4
UniRef50_Q2JNT3 Cluster: Quaternary amine uptake ABC transporter... 33 7.4
UniRef50_Q1N2V1 Cluster: Flagellar biosynthetic protein fliR; n=... 33 7.4
UniRef50_Q55GJ8 Cluster: Putative uncharacterized protein; n=1; ... 33 7.4
UniRef50_Q8X007 Cluster: Related to protein phosphatase 2c; n=3;... 33 7.4
UniRef50_Q8DIC3 Cluster: Apolipoprotein N-acyltransferase; n=1; ... 33 7.4
UniRef50_Q2NFA7 Cluster: Conserved hypothetical membrane-spannin... 33 9.8
>UniRef50_UPI0000D56B03 Cluster: PREDICTED: hypothetical protein;
n=1; Tribolium castaneum|Rep: PREDICTED: hypothetical
protein - Tribolium castaneum
Length = 294
Score = 52.0 bits (119), Expect = 1e-05
Identities = 22/56 (39%), Positives = 37/56 (66%)
Frame = +2
Query: 35 LLSVFGLAAGVASIMASVKWYIDHNITWLFIASVMSTVVSLASFVMVAVWFASTSE 202
++S+ AG A I+A +WYID+NITW F++S ST+ S SF+++++ T +
Sbjct: 114 VMSLGHFLAGFAGILAWKQWYIDNNITWFFLSSCFSTLTSAISFLLISLAVLDTRD 169
Score = 44.4 bits (100), Expect = 0.003
Identities = 16/34 (47%), Positives = 26/34 (76%)
Frame = +1
Query: 367 LSINILIAAFLEVLWSILSVKISYRGMRNNYKDD 468
L+ NI I + L V+WSI++ ++++GM+NNY DD
Sbjct: 182 LTANIFITSLLGVIWSIVATNVAFKGMKNNYPDD 215
>UniRef50_Q6N286 Cluster: Possible aliphatic sulfonate binding
protein of ABC transporter system; n=1; Rhodopseudomonas
palustris|Rep: Possible aliphatic sulfonate binding
protein of ABC transporter system - Rhodopseudomonas
palustris
Length = 331
Score = 36.3 bits (80), Expect = 0.80
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -3
Query: 159 AKDTTVDITEAMNSQVMLWSMYHFTDAMMLATPA--ARPNTLSKLGASTSMYP 7
AK+ V++ E +S WS FTD TPA A+ +TL+K G T + P
Sbjct: 243 AKNIPVEVLEKASSYDPAWSAKSFTDIKATLTPAQIAKMDTLAKWGVETKLLP 295
>UniRef50_A5FNK2 Cluster: Major facilitator superfamily MFS_1; n=1;
Flavobacterium johnsoniae UW101|Rep: Major facilitator
superfamily MFS_1 - Flavobacterium johnsoniae UW101
Length = 388
Score = 34.3 bits (75), Expect = 3.2
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +2
Query: 95 YIDHNITWLFIASVMSTVVSLASFVMVAVWFASTSEGEITDFYKDKVPFK 244
YI HN W + V+ VV L +F+ +++W +GE + K FK
Sbjct: 149 YIGHNFIWRY-TFVLIAVVGLLTFLFISLWMPHLDKGESVNMKKQLEFFK 197
>UniRef50_A1TA01 Cluster: PE-PGRS family protein; n=1; Mycobacterium
vanbaalenii PYR-1|Rep: PE-PGRS family protein -
Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1)
Length = 225
Score = 34.3 bits (75), Expect = 3.2
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +1
Query: 10 VHAGAGAELAQRVRPGGGRRQHHGVREVVHRPQHHLAIH 126
+H G G L RVRPGG R HG + P+HH H
Sbjct: 99 LHRGDGRGLPGRVRPGG--RTGHGAADRRRMPRHHAECH 135
>UniRef50_Q3JUT9 Cluster: Putative uncharacterized protein; n=1;
Burkholderia pseudomallei 1710b|Rep: Putative
uncharacterized protein - Burkholderia pseudomallei
(strain 1710b)
Length = 474
Score = 30.7 bits (66), Expect(2) = 3.7
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 52 PGGGRRQHHGVREVVHRPQHH 114
P G R+HH RE H+P+HH
Sbjct: 292 PSGEERRHHRGREDHHQPEHH 312
Score = 22.2 bits (45), Expect(2) = 3.7
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1
Query: 31 ELAQRVRPGGGRRQH 75
ELAQ RP G+R+H
Sbjct: 256 ELAQLARPALGQRRH 270
>UniRef50_Q97QN5 Cluster: Probable multidrug resistance protein
norM; n=31; Streptococcus|Rep: Probable multidrug
resistance protein norM - Streptococcus pneumoniae
Length = 453
Score = 33.9 bits (74), Expect = 4.2
Identities = 16/59 (27%), Positives = 32/59 (54%)
Frame = +2
Query: 8 GYMLVLAPSLLSVFGLAAGVASIMASVKWYIDHNITWLFIASVMSTVVSLASFVMVAVW 184
G +L LAP +L+ GL A VA++ W++ I L + SV+ +++ ++++
Sbjct: 107 GMVLFLAPIILNHIGLEAAVAAVAVRYLWFLSIGIIPLLLFSVIRSLLDSLGLTKLSMY 165
>UniRef50_Q8CV99 Cluster: Putative uncharacterized protein OB0858;
n=1; Oceanobacillus iheyensis|Rep: Putative
uncharacterized protein OB0858 - Oceanobacillus
iheyensis
Length = 222
Score = 33.1 bits (72), Expect = 7.4
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +3
Query: 552 LLKPKPDLIEHYPNKKIKKIYLAQDENGFYLKNQNHKVKQN 674
++KP PD ++HY +I+K+ + ENG L +++ VK N
Sbjct: 84 IVKPTPDFLDHYSLNEIEKV--EKVENGNVLTTRDNGVKHN 122
>UniRef50_Q2JNT3 Cluster: Quaternary amine uptake ABC transporter
(QAT) family, permease protein; n=2; Synechococcus|Rep:
Quaternary amine uptake ABC transporter (QAT) family,
permease protein - Synechococcus sp. (strain
JA-2-3B'a(2-13)) (Cyanobacteria bacteriumYellowstone
B-Prime)
Length = 205
Score = 33.1 bits (72), Expect = 7.4
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Frame = +2
Query: 8 GYMLVLAPSLLSVFGLAAGVASIMASVKWYIDHNITWLF-----IASVMSTVVSLASFVM 172
G M L L++ G+ G+A ++A + H++ WL I S++ TV SLA ++
Sbjct: 9 GLMWQLTQEHLAMVGMTLGMAVVLAVPLALLVHHVRWLALSVMGILSILYTVPSLALIIL 68
Query: 173 VAVW 184
+ W
Sbjct: 69 LVPW 72
>UniRef50_Q1N2V1 Cluster: Flagellar biosynthetic protein fliR; n=1;
Oceanobacter sp. RED65|Rep: Flagellar biosynthetic
protein fliR - Oceanobacter sp. RED65
Length = 262
Score = 33.1 bits (72), Expect = 7.4
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = +2
Query: 5 NGYMLVLAPSLLSVFGLAAGVASIMASVKWYIDHNITWLFIASVMSTVVSLASFVMVAVW 184
NG+++ + S F + G +I +V W I W+F A+++ + ++ S ++V +
Sbjct: 149 NGHLVAIEILADSFFTIPVGEGTISTNVMWSIVELAHWMFSAAIVLALPAITSMLVVNIA 208
Query: 185 F 187
F
Sbjct: 209 F 209
>UniRef50_Q55GJ8 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 475
Score = 33.1 bits (72), Expect = 7.4
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +3
Query: 558 KPKPDLIEHYPNKKIKKIYLAQDENGFYLKNQNHKVKQNTE 680
K K D+IE Y NK++ K YL E F LK Q+ K++Q E
Sbjct: 24 KIKNDIIEKYENKEVDKDYLM--EMMFQLKEQHSKLEQLIE 62
>UniRef50_Q8X007 Cluster: Related to protein phosphatase 2c; n=3;
Sordariomycetes|Rep: Related to protein phosphatase 2c -
Neurospora crassa
Length = 700
Score = 33.1 bits (72), Expect = 7.4
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +3
Query: 345 TSVHDGSTLHQHPHSRLPRSALVDPERQD 431
+S+H S L QHPH +LPRSA V P +QD
Sbjct: 132 SSLHPDSRL-QHPHHKLPRSASV-PHKQD 158
>UniRef50_Q8DIC3 Cluster: Apolipoprotein N-acyltransferase; n=1;
Synechococcus elongatus|Rep: Apolipoprotein
N-acyltransferase - Synechococcus elongatus
(Thermosynechococcus elongatus)
Length = 506
Score = 33.1 bits (72), Expect = 7.4
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +2
Query: 20 VLAPSLLSVFGLAAGVASIMASVKWYID-HNITWLFIASVMSTVVSLASFVMVAVWFAST 196
VLAP ++ GL G +S+ W D H +TW+ I V S ++S ++ ++ W A
Sbjct: 57 VLAPLWAAIAGLCWGWGFYGSSLVWVWDLHPLTWIGIDPVPSWLISRGIWLCLSSWGAVL 116
Query: 197 S 199
S
Sbjct: 117 S 117
>UniRef50_Q2NFA7 Cluster: Conserved hypothetical membrane-spanning
protein; n=1; Methanosphaera stadtmanae DSM 3091|Rep:
Conserved hypothetical membrane-spanning protein -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 292
Score = 32.7 bits (71), Expect = 9.8
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = +2
Query: 14 MLVLAPSLLSVFGLAAGVASIMASVKWYIDHNITWLFIASVMSTVVSLASFVMVAVW 184
+L+L + +SV+GL GV SIM K+ + T F + VV L F+++ +W
Sbjct: 230 VLILVTATISVYGLYNGVGSIMIYPKFTFTFSQT-PFNIYYFAYVVLLLPFIIIEIW 285
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 685,540,233
Number of Sequences: 1657284
Number of extensions: 13857155
Number of successful extensions: 44092
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 42151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44037
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60911752460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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