BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1428 (743 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_UPI0000D56B03 Cluster: PREDICTED: hypothetical protein;... 52 1e-05 UniRef50_Q6N286 Cluster: Possible aliphatic sulfonate binding pr... 36 0.80 UniRef50_A5FNK2 Cluster: Major facilitator superfamily MFS_1; n=... 34 3.2 UniRef50_A1TA01 Cluster: PE-PGRS family protein; n=1; Mycobacter... 34 3.2 UniRef50_Q3JUT9 Cluster: Putative uncharacterized protein; n=1; ... 31 3.7 UniRef50_Q97QN5 Cluster: Probable multidrug resistance protein n... 34 4.2 UniRef50_Q8CV99 Cluster: Putative uncharacterized protein OB0858... 33 7.4 UniRef50_Q2JNT3 Cluster: Quaternary amine uptake ABC transporter... 33 7.4 UniRef50_Q1N2V1 Cluster: Flagellar biosynthetic protein fliR; n=... 33 7.4 UniRef50_Q55GJ8 Cluster: Putative uncharacterized protein; n=1; ... 33 7.4 UniRef50_Q8X007 Cluster: Related to protein phosphatase 2c; n=3;... 33 7.4 UniRef50_Q8DIC3 Cluster: Apolipoprotein N-acyltransferase; n=1; ... 33 7.4 UniRef50_Q2NFA7 Cluster: Conserved hypothetical membrane-spannin... 33 9.8 >UniRef50_UPI0000D56B03 Cluster: PREDICTED: hypothetical protein; n=1; Tribolium castaneum|Rep: PREDICTED: hypothetical protein - Tribolium castaneum Length = 294 Score = 52.0 bits (119), Expect = 1e-05 Identities = 22/56 (39%), Positives = 37/56 (66%) Frame = +2 Query: 35 LLSVFGLAAGVASIMASVKWYIDHNITWLFIASVMSTVVSLASFVMVAVWFASTSE 202 ++S+ AG A I+A +WYID+NITW F++S ST+ S SF+++++ T + Sbjct: 114 VMSLGHFLAGFAGILAWKQWYIDNNITWFFLSSCFSTLTSAISFLLISLAVLDTRD 169 Score = 44.4 bits (100), Expect = 0.003 Identities = 16/34 (47%), Positives = 26/34 (76%) Frame = +1 Query: 367 LSINILIAAFLEVLWSILSVKISYRGMRNNYKDD 468 L+ NI I + L V+WSI++ ++++GM+NNY DD Sbjct: 182 LTANIFITSLLGVIWSIVATNVAFKGMKNNYPDD 215 >UniRef50_Q6N286 Cluster: Possible aliphatic sulfonate binding protein of ABC transporter system; n=1; Rhodopseudomonas palustris|Rep: Possible aliphatic sulfonate binding protein of ABC transporter system - Rhodopseudomonas palustris Length = 331 Score = 36.3 bits (80), Expect = 0.80 Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 2/53 (3%) Frame = -3 Query: 159 AKDTTVDITEAMNSQVMLWSMYHFTDAMMLATPA--ARPNTLSKLGASTSMYP 7 AK+ V++ E +S WS FTD TPA A+ +TL+K G T + P Sbjct: 243 AKNIPVEVLEKASSYDPAWSAKSFTDIKATLTPAQIAKMDTLAKWGVETKLLP 295 >UniRef50_A5FNK2 Cluster: Major facilitator superfamily MFS_1; n=1; Flavobacterium johnsoniae UW101|Rep: Major facilitator superfamily MFS_1 - Flavobacterium johnsoniae UW101 Length = 388 Score = 34.3 bits (75), Expect = 3.2 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = +2 Query: 95 YIDHNITWLFIASVMSTVVSLASFVMVAVWFASTSEGEITDFYKDKVPFK 244 YI HN W + V+ VV L +F+ +++W +GE + K FK Sbjct: 149 YIGHNFIWRY-TFVLIAVVGLLTFLFISLWMPHLDKGESVNMKKQLEFFK 197 >UniRef50_A1TA01 Cluster: PE-PGRS family protein; n=1; Mycobacterium vanbaalenii PYR-1|Rep: PE-PGRS family protein - Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) Length = 225 Score = 34.3 bits (75), Expect = 3.2 Identities = 17/39 (43%), Positives = 20/39 (51%) Frame = +1 Query: 10 VHAGAGAELAQRVRPGGGRRQHHGVREVVHRPQHHLAIH 126 +H G G L RVRPGG R HG + P+HH H Sbjct: 99 LHRGDGRGLPGRVRPGG--RTGHGAADRRRMPRHHAECH 135 >UniRef50_Q3JUT9 Cluster: Putative uncharacterized protein; n=1; Burkholderia pseudomallei 1710b|Rep: Putative uncharacterized protein - Burkholderia pseudomallei (strain 1710b) Length = 474 Score = 30.7 bits (66), Expect(2) = 3.7 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = +1 Query: 52 PGGGRRQHHGVREVVHRPQHH 114 P G R+HH RE H+P+HH Sbjct: 292 PSGEERRHHRGREDHHQPEHH 312 Score = 22.2 bits (45), Expect(2) = 3.7 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = +1 Query: 31 ELAQRVRPGGGRRQH 75 ELAQ RP G+R+H Sbjct: 256 ELAQLARPALGQRRH 270 >UniRef50_Q97QN5 Cluster: Probable multidrug resistance protein norM; n=31; Streptococcus|Rep: Probable multidrug resistance protein norM - Streptococcus pneumoniae Length = 453 Score = 33.9 bits (74), Expect = 4.2 Identities = 16/59 (27%), Positives = 32/59 (54%) Frame = +2 Query: 8 GYMLVLAPSLLSVFGLAAGVASIMASVKWYIDHNITWLFIASVMSTVVSLASFVMVAVW 184 G +L LAP +L+ GL A VA++ W++ I L + SV+ +++ ++++ Sbjct: 107 GMVLFLAPIILNHIGLEAAVAAVAVRYLWFLSIGIIPLLLFSVIRSLLDSLGLTKLSMY 165 >UniRef50_Q8CV99 Cluster: Putative uncharacterized protein OB0858; n=1; Oceanobacillus iheyensis|Rep: Putative uncharacterized protein OB0858 - Oceanobacillus iheyensis Length = 222 Score = 33.1 bits (72), Expect = 7.4 Identities = 15/41 (36%), Positives = 26/41 (63%) Frame = +3 Query: 552 LLKPKPDLIEHYPNKKIKKIYLAQDENGFYLKNQNHKVKQN 674 ++KP PD ++HY +I+K+ + ENG L +++ VK N Sbjct: 84 IVKPTPDFLDHYSLNEIEKV--EKVENGNVLTTRDNGVKHN 122 >UniRef50_Q2JNT3 Cluster: Quaternary amine uptake ABC transporter (QAT) family, permease protein; n=2; Synechococcus|Rep: Quaternary amine uptake ABC transporter (QAT) family, permease protein - Synechococcus sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria bacteriumYellowstone B-Prime) Length = 205 Score = 33.1 bits (72), Expect = 7.4 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 5/64 (7%) Frame = +2 Query: 8 GYMLVLAPSLLSVFGLAAGVASIMASVKWYIDHNITWLF-----IASVMSTVVSLASFVM 172 G M L L++ G+ G+A ++A + H++ WL I S++ TV SLA ++ Sbjct: 9 GLMWQLTQEHLAMVGMTLGMAVVLAVPLALLVHHVRWLALSVMGILSILYTVPSLALIIL 68 Query: 173 VAVW 184 + W Sbjct: 69 LVPW 72 >UniRef50_Q1N2V1 Cluster: Flagellar biosynthetic protein fliR; n=1; Oceanobacter sp. RED65|Rep: Flagellar biosynthetic protein fliR - Oceanobacter sp. RED65 Length = 262 Score = 33.1 bits (72), Expect = 7.4 Identities = 15/61 (24%), Positives = 32/61 (52%) Frame = +2 Query: 5 NGYMLVLAPSLLSVFGLAAGVASIMASVKWYIDHNITWLFIASVMSTVVSLASFVMVAVW 184 NG+++ + S F + G +I +V W I W+F A+++ + ++ S ++V + Sbjct: 149 NGHLVAIEILADSFFTIPVGEGTISTNVMWSIVELAHWMFSAAIVLALPAITSMLVVNIA 208 Query: 185 F 187 F Sbjct: 209 F 209 >UniRef50_Q55GJ8 Cluster: Putative uncharacterized protein; n=1; Dictyostelium discoideum AX4|Rep: Putative uncharacterized protein - Dictyostelium discoideum AX4 Length = 475 Score = 33.1 bits (72), Expect = 7.4 Identities = 19/41 (46%), Positives = 25/41 (60%) Frame = +3 Query: 558 KPKPDLIEHYPNKKIKKIYLAQDENGFYLKNQNHKVKQNTE 680 K K D+IE Y NK++ K YL E F LK Q+ K++Q E Sbjct: 24 KIKNDIIEKYENKEVDKDYLM--EMMFQLKEQHSKLEQLIE 62 >UniRef50_Q8X007 Cluster: Related to protein phosphatase 2c; n=3; Sordariomycetes|Rep: Related to protein phosphatase 2c - Neurospora crassa Length = 700 Score = 33.1 bits (72), Expect = 7.4 Identities = 17/29 (58%), Positives = 21/29 (72%) Frame = +3 Query: 345 TSVHDGSTLHQHPHSRLPRSALVDPERQD 431 +S+H S L QHPH +LPRSA V P +QD Sbjct: 132 SSLHPDSRL-QHPHHKLPRSASV-PHKQD 158 >UniRef50_Q8DIC3 Cluster: Apolipoprotein N-acyltransferase; n=1; Synechococcus elongatus|Rep: Apolipoprotein N-acyltransferase - Synechococcus elongatus (Thermosynechococcus elongatus) Length = 506 Score = 33.1 bits (72), Expect = 7.4 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Frame = +2 Query: 20 VLAPSLLSVFGLAAGVASIMASVKWYID-HNITWLFIASVMSTVVSLASFVMVAVWFAST 196 VLAP ++ GL G +S+ W D H +TW+ I V S ++S ++ ++ W A Sbjct: 57 VLAPLWAAIAGLCWGWGFYGSSLVWVWDLHPLTWIGIDPVPSWLISRGIWLCLSSWGAVL 116 Query: 197 S 199 S Sbjct: 117 S 117 >UniRef50_Q2NFA7 Cluster: Conserved hypothetical membrane-spanning protein; n=1; Methanosphaera stadtmanae DSM 3091|Rep: Conserved hypothetical membrane-spanning protein - Methanosphaera stadtmanae (strain DSM 3091) Length = 292 Score = 32.7 bits (71), Expect = 9.8 Identities = 19/57 (33%), Positives = 31/57 (54%) Frame = +2 Query: 14 MLVLAPSLLSVFGLAAGVASIMASVKWYIDHNITWLFIASVMSTVVSLASFVMVAVW 184 +L+L + +SV+GL GV SIM K+ + T F + VV L F+++ +W Sbjct: 230 VLILVTATISVYGLYNGVGSIMIYPKFTFTFSQT-PFNIYYFAYVVLLLPFIIIEIW 285 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 685,540,233 Number of Sequences: 1657284 Number of extensions: 13857155 Number of successful extensions: 44092 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 42151 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 44037 length of database: 575,637,011 effective HSP length: 99 effective length of database: 411,565,895 effective search space used: 60911752460 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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