Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1428
(743 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g21340.2 68415.m02540 enhanced disease susceptibility protein... 30 1.4
At2g21340.1 68415.m02539 enhanced disease susceptibility protein... 30 1.4
At3g18800.1 68416.m02388 expressed protein 29 3.3
At3g60160.1 68416.m06717 ABC transporter family protein similar ... 29 4.3
At3g27820.1 68416.m03470 monodehydroascorbate reductase, putativ... 29 4.3
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 29 4.3
At1g55350.4 68414.m06326 calpain-type cysteine protease family i... 28 5.7
At1g55350.3 68414.m06325 calpain-type cysteine protease family i... 28 5.7
At1g55350.2 68414.m06324 calpain-type cysteine protease family i... 28 5.7
At1g55350.1 68414.m06323 calpain-type cysteine protease family i... 28 5.7
>At2g21340.2 68415.m02540 enhanced disease susceptibility protein,
putative / salicylic acid induction deficient protein,
putative similar to enhanced disease susceptibility 5
[Arabidopsis thaliana] GI:16589070
Length = 552
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +2
Query: 20 VLAPS-LLSVFGLAAGV-ASIMASVKWYIDHNITWLFIASVMSTVVSLASFVMVAVWFAS 193
V +PS LL++FGLAA V ++M+ V +Y ++ A+ M T + A VM+ ++ S
Sbjct: 323 VPSPSELLTIFGLAAPVFITMMSKVLFY----TLLVYFATSMGTNIIAAHQVMLQIYTMS 378
Query: 194 TSEGE 208
T GE
Sbjct: 379 TVWGE 383
>At2g21340.1 68415.m02539 enhanced disease susceptibility protein,
putative / salicylic acid induction deficient protein,
putative similar to enhanced disease susceptibility 5
[Arabidopsis thaliana] GI:16589070
Length = 555
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +2
Query: 20 VLAPS-LLSVFGLAAGV-ASIMASVKWYIDHNITWLFIASVMSTVVSLASFVMVAVWFAS 193
V +PS LL++FGLAA V ++M+ V +Y ++ A+ M T + A VM+ ++ S
Sbjct: 326 VPSPSELLTIFGLAAPVFITMMSKVLFY----TLLVYFATSMGTNIIAAHQVMLQIYTMS 381
Query: 194 TSEGE 208
T GE
Sbjct: 382 TVWGE 386
>At3g18800.1 68416.m02388 expressed protein
Length = 197
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -2
Query: 289 KSYAHTHLPVSRHEIFERYFIFIKVCYFSFRR-GGEPHRHH 170
K A H H++F+ +FIF+ V +FS + G H H
Sbjct: 39 KKRAIDHQKKKLHKLFQLFFIFLAVIFFSLSQPSGRLHCRH 79
>At3g60160.1 68416.m06717 ABC transporter family protein similar to
ATP-binding cassette transporter MRP8 GI:18031899 from
[Arabidopsis thaliana]
Length = 1490
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/63 (23%), Positives = 33/63 (52%)
Frame = +1
Query: 286 SSHVIVALNSTKVSEESQGSRVFTTGVLSINILIAAFLEVLWSILSVKISYRGMRNNYKD 465
++ +I+ + + +V + + + + +L+ A E L SILS++ S R + KD
Sbjct: 819 AADLILVMQNGRVMQAGKFEELLKQNI-GFEVLVGAHNEALDSILSIEKSSRNFKEGSKD 877
Query: 466 DSS 474
D++
Sbjct: 878 DTA 880
>At3g27820.1 68416.m03470 monodehydroascorbate reductase, putative
similar to cytosolic monodehydroascorbate reductase
GB:BAA77214 [Oryza sativa]
Length = 488
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +2
Query: 8 GYMLVLAPSLLSVFGLAAGVASIMASVKWYIDHNITWLFIASVMSTVV 151
G++L AP+ L F G + KWY DH I + V S V
Sbjct: 52 GFLLPEAPARLPSFHTCVGANDEKLTPKWYKDHGIELVLGTRVKSVDV 99
>At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related
similar to BEIGE (GI:3928547) [Rattus norvegicus];
Similar to gb|U70015 lysosomal trafficking regulator from
Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta
repeats. ESTs gb|T43386 and gb|AA395236 come from this
gene
Length = 3601
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = -3
Query: 204 PSDVEANHTATITNDAKDTTVDITEAMNSQVMLWSMYHFTDAMMLATPAARPN 46
PSD + T + ++D +T+ +T + V +W M H TD + + + N
Sbjct: 3464 PSDSVLSVTGSTSSDWLETSWYVTGHQSGAVKVWRMIHCTDPVSAESKTSSSN 3516
>At1g55350.4 68414.m06326 calpain-type cysteine protease family
identical to calpain-like protein GI:20268660 from
[Arabidopsis thaliana]; contains Pfam profiles: PF00648
Calpain family cysteine protease, PF01067 Calpain large
subunit,domain III; identical to cDNA calpain-like
protein GI:20268659
Length = 2151
Score = 28.3 bits (60), Expect = 5.7
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +2
Query: 92 WYIDHNITWLFIASVMS 142
WY+ H I+++F+ASV+S
Sbjct: 314 WYLGHCISYIFVASVLS 330
>At1g55350.3 68414.m06325 calpain-type cysteine protease family
identical to calpain-like protein GI:20268660 from
[Arabidopsis thaliana]; contains Pfam profiles: PF00648
Calpain family cysteine protease, PF01067 Calpain large
subunit,domain III; identical to cDNA calpain-like
protein GI:20268659
Length = 2151
Score = 28.3 bits (60), Expect = 5.7
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +2
Query: 92 WYIDHNITWLFIASVMS 142
WY+ H I+++F+ASV+S
Sbjct: 314 WYLGHCISYIFVASVLS 330
>At1g55350.2 68414.m06324 calpain-type cysteine protease family
identical to calpain-like protein GI:20268660 from
[Arabidopsis thaliana]; contains Pfam profiles: PF00648
Calpain family cysteine protease, PF01067 Calpain large
subunit,domain III; identical to cDNA calpain-like
protein GI:20268659
Length = 2151
Score = 28.3 bits (60), Expect = 5.7
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +2
Query: 92 WYIDHNITWLFIASVMS 142
WY+ H I+++F+ASV+S
Sbjct: 314 WYLGHCISYIFVASVLS 330
>At1g55350.1 68414.m06323 calpain-type cysteine protease family
identical to calpain-like protein GI:20268660 from
[Arabidopsis thaliana]; contains Pfam profiles: PF00648
Calpain family cysteine protease, PF01067 Calpain large
subunit,domain III; identical to cDNA calpain-like
protein GI:20268659
Length = 2151
Score = 28.3 bits (60), Expect = 5.7
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +2
Query: 92 WYIDHNITWLFIASVMS 142
WY+ H I+++F+ASV+S
Sbjct: 314 WYLGHCISYIFVASVLS 330
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,875,976
Number of Sequences: 28952
Number of extensions: 305672
Number of successful extensions: 903
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 903
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1643603136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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