Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1427
         (819 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.7  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    24   1.7  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    23   2.9  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   5.1  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   6.7  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   8.9  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +1

Query: 385 LRDPPEGVDKKRAIQLQASHLAYLEQH 465
           LR  PEG    R + +  S + YL QH
Sbjct: 206 LRLKPEGRISNRRVFISFSKICYLHQH 232


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +1

Query: 385 LRDPPEGVDKKRAIQLQASHLAYLEQH 465
           LR  PEG    R + +  S + YL QH
Sbjct: 224 LRLKPEGRISNRRVFISFSKICYLHQH 250


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +3

Query: 72  CLFREMTMKSWCRSK 116
           CLF EMT+   CR K
Sbjct: 66  CLFLEMTLAHHCRFK 80


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 666 PSCLPN*HACNDVDRVEKVPVLNIPP 589
           P+  P    CN+   + +VP L +PP
Sbjct: 162 PALPPTGFLCNNYPPLPQVPPLPLPP 187


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -2

Query: 182 HQHQLGPPRKRLRPNRPYLHQPLAPAPR 99
           HQ +  P R R   +R  + +P APA R
Sbjct: 323 HQRRNEPKRPRPNIDRHEVTRPAAPANR 350


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = +3

Query: 159 WRTKLMLMLDMLRNKKKNALPSCRVARW 242
           W      M+D L+N   N LP   V  W
Sbjct: 393 WAQYTNKMIDRLKNANNNELPE-HVIMW 419


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,610
Number of Sequences: 336
Number of extensions: 2755
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22414104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)