Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1421
(599 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g67310.1 68414.m07661 calmodulin-binding protein similar to a... 32 0.33
At1g14380.2 68414.m01705 calmodulin-binding family protein conta... 31 0.44
At1g14380.1 68414.m01704 calmodulin-binding family protein conta... 31 0.44
At2g33990.1 68415.m04162 calmodulin-binding family protein simil... 31 0.58
At5g13460.1 68418.m01549 calmodulin-binding family protein low s... 31 0.77
At1g20970.1 68414.m02625 adhesin-related contains TIGRFAM TIGR01... 31 0.77
At2g40020.2 68415.m04917 expressed protein 30 1.3
At3g52290.1 68416.m05747 calmodulin-binding family protein simil... 29 1.8
At3g51380.1 68416.m05628 calmodulin-binding family protein 29 2.4
At2g02790.1 68415.m00222 calmodulin-binding family protein very ... 29 2.4
At5g06710.2 68418.m00759 homeobox-leucine zipper protein 14 (HAT... 29 3.1
At5g06710.1 68418.m00758 homeobox-leucine zipper protein 14 (HAT... 29 3.1
At2g43680.2 68415.m05430 calmodulin-binding family protein simil... 29 3.1
At2g43680.1 68415.m05429 calmodulin-binding family protein simil... 29 3.1
At4g14750.1 68417.m02270 calmodulin-binding family protein conta... 28 5.4
At5g07240.1 68418.m00826 calmodulin-binding family protein conta... 27 7.2
At2g20190.1 68415.m02361 CLIP-associating protein (CLASP) -relat... 27 9.5
At1g72990.1 68414.m08441 glycosyl hydrolase family 35 protein si... 27 9.5
>At1g67310.1 68414.m07661 calmodulin-binding protein similar to
anther ethylene-upregulated calmodulin-binding protein
ER1 GI:11612392 from[Nicotiana tabacum]
Length = 1035
Score = 31.9 bits (69), Expect = 0.33
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 378 VKSEEQAATKIQAAFRGHRTRKSMSMKAA 464
V++ QAA +IQAAFR H RK +AA
Sbjct: 814 VRNAAQAAARIQAAFRAHSFRKRKQREAA 842
>At1g14380.2 68414.m01705 calmodulin-binding family protein contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 602
Score = 31.5 bits (68), Expect = 0.44
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +2
Query: 509 LEAEFKSDDKELCHAATKIQASFRGHQARK 598
LE+ + EL AA K+QA+FR HQAR+
Sbjct: 82 LESRNDLGEVELEQAAIKVQATFRAHQARR 111
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 390 EQAATKIQAAFRGHRTRKS 446
EQAA K+QA FR H+ R++
Sbjct: 94 EQAAIKVQATFRAHQARRA 112
>At1g14380.1 68414.m01704 calmodulin-binding family protein contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 664
Score = 31.5 bits (68), Expect = 0.44
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +2
Query: 509 LEAEFKSDDKELCHAATKIQASFRGHQARK 598
LE+ + EL AA K+QA+FR HQAR+
Sbjct: 82 LESRNDLGEVELEQAAIKVQATFRAHQARR 111
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 390 EQAATKIQAAFRGHRTRKS 446
EQAA K+QA FR H+ R++
Sbjct: 94 EQAAIKVQATFRAHQARRA 112
>At2g33990.1 68415.m04162 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 249
Score = 31.1 bits (67), Expect = 0.58
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = +3
Query: 381 KSEEQAATKIQAAFRGHRTRKSM 449
+SE+ AAT+IQ AF+ ++ RKS+
Sbjct: 44 RSEDWAATRIQTAFKAYKARKSL 66
>At5g13460.1 68418.m01549 calmodulin-binding family protein low
similarity to SF16 protein [Helianthus annuus]
GI:560150; contains Pfam profile PF00612: IQ
calmodulin-binding motif
Length = 443
Score = 30.7 bits (66), Expect = 0.77
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 381 KSEEQAATKIQAAFRGHRTRKSM 449
+ E AAT+IQ AFRGH RK++
Sbjct: 108 QEEVLAATRIQTAFRGHLARKAL 130
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +2
Query: 551 AATKIQASFRGHQARK 598
AAT+IQ +FRGH ARK
Sbjct: 113 AATRIQTAFRGHLARK 128
>At1g20970.1 68414.m02625 adhesin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; contains TIGRFAM TIGR00864:
polycystin cation channel protein; similar to
fimbriae-associated protein Fap1 [Streptococcus
parasanguinis] (GI:3929312)
Length = 1498
Score = 30.7 bits (66), Expect = 0.77
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +1
Query: 283 KRKTKKTIKMNRRHRITRI-KPITLRKRRTKKA*SQKNRQPLKSRQRSVDTEQ 438
KRK K+ KM +HR+ I K +R+ K+ K R LK+++ + + E+
Sbjct: 1225 KRKQKEAAKMKEQHRLEEIAKAKEAMERKKKREEKAKARAVLKAQKEAEEREK 1277
>At2g40020.2 68415.m04917 expressed protein
Length = 182
Score = 29.9 bits (64), Expect = 1.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -2
Query: 100 FTHTHTQASSTENTFFFCGNS 38
FTH HT + TFF+CG +
Sbjct: 161 FTHIHTNLNIRNETFFYCGQN 181
>At3g52290.1 68416.m05747 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 430
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 375 GVKSEEQAATKIQAAFRGHRTRKSM 449
G EE AA KIQ AFRG+ R+++
Sbjct: 103 GKSMEEIAAIKIQTAFRGYMARRAL 127
>At3g51380.1 68416.m05628 calmodulin-binding family protein
Length = 103
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3
Query: 387 EEQAATKIQAAFRGHRTRKS 446
EE AA KIQA FRGH R++
Sbjct: 36 EEIAAVKIQAFFRGHLARRA 55
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2
Query: 551 AATKIQASFRGHQARK 598
AA KIQA FRGH AR+
Sbjct: 39 AAVKIQAFFRGHLARR 54
>At2g02790.1 68415.m00222 calmodulin-binding family protein very low
similarity to SP|P12036 Neurofilament triplet H protein
{Homo sapiens}; contains Pfam profile PF00612: IQ
calmodulin-binding motif
Length = 636
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 509 LEAEFKSDDKELCHAATKIQASFRGHQARK 598
LE+ S++ +L AATK+QA+ R QAR+
Sbjct: 95 LESGNDSEEVKLEEAATKVQAALRAQQARE 124
>At5g06710.2 68418.m00759 homeobox-leucine zipper protein 14 (HAT14)
/ HD-ZIP protein 14 contains similarity to homeodomain
leucine zipper protein
Length = 237
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 408 IQAAFRGHRTRKSMSMKAAKQEPCKPEPVPTKAD 509
+ AF GHR+ S S + + E KP P K+D
Sbjct: 45 LDVAFGGHRSLSSSSSPSVEDEKKKPAPRAKKSD 78
>At5g06710.1 68418.m00758 homeobox-leucine zipper protein 14 (HAT14)
/ HD-ZIP protein 14 contains similarity to homeodomain
leucine zipper protein
Length = 336
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 408 IQAAFRGHRTRKSMSMKAAKQEPCKPEPVPTKAD 509
+ AF GHR+ S S + + E KP P K+D
Sbjct: 45 LDVAFGGHRSLSSSSSPSVEDEKKKPAPRAKKSD 78
>At2g43680.2 68415.m05430 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 669
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 387 EEQAATKIQAAFRGHRTRKS 446
+ +ATKIQ AFRG+ RKS
Sbjct: 322 QHASATKIQGAFRGYMARKS 341
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 551 AATKIQASFRGHQARK 598
+ATKIQ +FRG+ ARK
Sbjct: 325 SATKIQGAFRGYMARK 340
>At2g43680.1 68415.m05429 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 668
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 387 EEQAATKIQAAFRGHRTRKS 446
+ +ATKIQ AFRG+ RKS
Sbjct: 321 QHASATKIQGAFRGYMARKS 340
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 551 AATKIQASFRGHQARK 598
+ATKIQ +FRG+ ARK
Sbjct: 324 SATKIQGAFRGYMARK 339
>At4g14750.1 68417.m02270 calmodulin-binding family protein contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 387
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 387 EEQAATKIQAAFRGHRTRKSM 449
EE AA KIQA +R H RK++
Sbjct: 104 EEFAAIKIQACYRSHLARKAL 124
>At5g07240.1 68418.m00826 calmodulin-binding family protein contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 401
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/26 (50%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
Frame = +3
Query: 387 EEQAATKIQAAFRGHRTRKSM-SMKA 461
E +AA KIQ+AFRG+ R+++ ++KA
Sbjct: 105 EYKAAMKIQSAFRGYLARRALRALKA 130
>At2g20190.1 68415.m02361 CLIP-associating protein (CLASP) -related
similar to CLIP-associating protein CLASP2 (GI:13508651)
[Rattus norvegicus]
Length = 1439
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +1
Query: 124 PIHSISSTSNANTTCYSAKSTH 189
P H+++ SN++T+ +A+STH
Sbjct: 627 PFHAVAPASNSHTSSAAAESTH 648
>At1g72990.1 68414.m08441 glycosyl hydrolase family 35 protein
similar to beta-galactosidase GI:2289790 from [Bacillus
circulans]; contains Pfam profile PF01301: Glycosyl
hydrolases family 35
Length = 697
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/27 (40%), Positives = 20/27 (74%)
Frame = +3
Query: 90 VCVKLRLDFQSSDPFYLEYLKRKYNML 170
+ VK RL ++SDP YL+ ++R +++L
Sbjct: 169 LAVKPRLQLRTSDPVYLKLVERWWDVL 195
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,502,297
Number of Sequences: 28952
Number of extensions: 203832
Number of successful extensions: 696
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 696
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1187288784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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