Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1418X
(499 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 24 0.66
AM292373-1|CAL23185.2| 360|Tribolium castaneum gustatory recept... 22 2.7
AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory recept... 22 2.7
U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic pr... 22 3.5
DQ494421-1|ABF55372.1| 73|Tribolium castaneum telomerase rever... 22 3.5
DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase rever... 22 3.5
AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory recept... 21 4.7
AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory recept... 21 4.7
U77974-1|AAB36556.1| 276|Tribolium castaneum transcription fact... 21 6.2
DQ855492-1|ABH88179.1| 251|Tribolium castaneum chemosensory pro... 21 8.1
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 21 8.1
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 24.2 bits (50), Expect = 0.66
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 70 VCARLLPCKTVLQAH 26
+C R+L CK+ LQ H
Sbjct: 139 ICHRVLSCKSALQMH 153
>AM292373-1|CAL23185.2| 360|Tribolium castaneum gustatory receptor
candidate 52 protein.
Length = 360
Score = 22.2 bits (45), Expect = 2.7
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -2
Query: 105 YFWYFRSYMSF 73
+FW ++SYMS+
Sbjct: 124 FFWSYQSYMSY 134
>AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory receptor
candidate 32 protein.
Length = 651
Score = 22.2 bits (45), Expect = 2.7
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -2
Query: 105 YFWYFRSYMSF 73
+FW ++SYMS+
Sbjct: 124 FFWSYQSYMSY 134
Score = 21.4 bits (43), Expect = 4.7
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +3
Query: 363 QAAQSFYRTYLCDILEH 413
QA +FY LCD + H
Sbjct: 562 QAVCTFYNILLCDSVAH 578
>U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic
protein protein.
Length = 372
Score = 21.8 bits (44), Expect = 3.5
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 146 KTLKSIQNIEQNFSY 190
+ LK I NI+ NF Y
Sbjct: 53 EALKKIYNIQNNFEY 67
>DQ494421-1|ABF55372.1| 73|Tribolium castaneum telomerase reverse
transcriptase protein.
Length = 73
Score = 21.8 bits (44), Expect = 3.5
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = +1
Query: 64 HRLEGHITSEVPKIFDAVFECTLEMINKDFEEYPEHRTE 180
+RL + PKI ++ + L + K+F +H+T+
Sbjct: 5 YRLSLKSRQKAPKIVNSKYNSILNIALKNFRLCKKHKTK 43
>DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase reverse
transcriptase protein.
Length = 596
Score = 21.8 bits (44), Expect = 3.5
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = +1
Query: 64 HRLEGHITSEVPKIFDAVFECTLEMINKDFEEYPEHRTE 180
+RL + PKI ++ + L + K+F +H+T+
Sbjct: 5 YRLSLKSRQKAPKIVNSKYNSILNIALKNFRLCKKHKTK 43
>AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory receptor
candidate 62 protein.
Length = 320
Score = 21.4 bits (43), Expect = 4.7
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +3
Query: 363 QAAQSFYRTYLCDILEH 413
QA +FY LCD + H
Sbjct: 242 QAVCTFYNILLCDSVAH 258
>AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory receptor
candidate 37 protein.
Length = 331
Score = 21.4 bits (43), Expect = 4.7
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +3
Query: 363 QAAQSFYRTYLCDILEH 413
QA +FY LCD + H
Sbjct: 242 QAVCTFYNILLCDSVAH 258
>U77974-1|AAB36556.1| 276|Tribolium castaneum transcription factor
homolog protein.
Length = 276
Score = 21.0 bits (42), Expect = 6.2
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2
Query: 455 HYARYNPGSHF 487
HYARY+P +F
Sbjct: 172 HYARYHPYPNF 182
>DQ855492-1|ABH88179.1| 251|Tribolium castaneum chemosensory
protein 6 protein.
Length = 251
Score = 20.6 bits (41), Expect = 8.1
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = -1
Query: 493 NEKM*ARIVACIVSPAPCDVSVTTLK 416
N +M AC++S PC LK
Sbjct: 36 NRRMVNYYAACLLSKGPCPPQGVDLK 61
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 20.6 bits (41), Expect = 8.1
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -1
Query: 82 YVLQVCARLLPCKTVLQAHE 23
+ +VC R K VLQ HE
Sbjct: 135 FTCEVCNRSFGYKHVLQNHE 154
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,438
Number of Sequences: 336
Number of extensions: 3194
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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