Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1418X
         (499 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    27   0.35 
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   4.4  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    23   4.4  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   7.6  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 27.1 bits (57), Expect = 0.35
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +2

Query: 8   LLFLKLVSLKYCLAWQQSCTDLKDI*LLKYQKYLMQSLNVL 130
           LLF KL S K  +AW+Q   D K        ++L Q +N+L
Sbjct: 258 LLFYKLDS-KTLVAWEQYSVDFKTDEFTNLVEFLEQRVNIL 297


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.4 bits (48), Expect = 4.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 152  LKSIQNIEQNFSYYC 196
            LKS+ N   +F+YYC
Sbjct: 1508 LKSVSNFLGSFNYYC 1522


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 4.4
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -3

Query: 137 ISRVHSKTASNIFGTSEVICPSSLCTIAAM 48
           +++VH K A  +      I   ++C IA+M
Sbjct: 843 VNKVHRKLAMRVTSAYRTISYEAVCVIASM 872


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 118  FECTLEMINKDFEEYPEH 171
            F C LE + +D +EY +H
Sbjct: 3269 FGCMLEDLREDVQEYLKH 3286


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 597,919
Number of Sequences: 2352
Number of extensions: 12481
Number of successful extensions: 71
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 71
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44400195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)