Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1418X
(499 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y08614-1|CAA69905.2| 1071|Homo sapiens CRM1 protein. 142 8e-34
D89729-1|BAA23415.1| 1071|Homo sapiens CRM1 protein protein. 142 8e-34
BC032847-1|AAH32847.1| 1071|Homo sapiens XPO1 protein protein. 142 8e-34
AC016727-1|AAY14949.1| 1071|Homo sapiens unknown protein. 142 8e-34
BC119680-1|AAI19681.1| 316|Homo sapiens ZNF101 protein protein. 31 2.2
BC011502-1|AAH11502.2| 373|Homo sapiens ZNF101 protein protein. 31 2.2
AY149174-1|AAN46749.1| 436|Homo sapiens zinc finger protein 12 ... 31 2.2
AL096747-1|CAB46422.1| 232|Homo sapiens hypothetical protein pr... 31 2.2
>Y08614-1|CAA69905.2| 1071|Homo sapiens CRM1 protein.
Length = 1071
Score = 142 bits (343), Expect = 8e-34
Identities = 64/80 (80%), Positives = 72/80 (90%)
Frame = +1
Query: 13 VPEAREPEVLSCMAAIVHRLEGHITSEVPKIFDAVFECTLEMINKDFEEYPEHRTEFFLL 192
VP AREPEVLS MA IV++L GHIT+E+P+IFDAVFECTL MINKDFEEYPEHRT FFLL
Sbjct: 792 VPAAREPEVLSTMAIIVNKLGGHITAEIPQIFDAVFECTLNMINKDFEEYPEHRTNFFLL 851
Query: 193 LQAVNTNCFKAFLSIPPAQF 252
LQAVN++CF AFL+IPP QF
Sbjct: 852 LQAVNSHCFPAFLAIPPTQF 871
Score = 140 bits (338), Expect = 3e-33
Identities = 67/105 (63%), Positives = 80/105 (76%)
Frame = +3
Query: 183 FLITAGGQYKLFQSIFEHTTSTIQLVLDSIIWAFKHTMRNVADTGLQILYRLLLNVEEHP 362
FL+ F + + +LVLDSIIWAFKHTMRNVADTGLQIL+ LL NV +
Sbjct: 849 FLLLQAVNSHCFPAFLAIPPTQFKLVLDSIIWAFKHTMRNVADTGLQILFTLLQNVAQEE 908
Query: 363 QAAQSFYRTYLCDILEHVFSVVTDTSHGAGLTMHATILAHIFSLV 497
AAQSFY+TY CDIL+H+FSVVTDTSH AGLTMHA+ILA++F+LV
Sbjct: 909 AAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLV 953
>D89729-1|BAA23415.1| 1071|Homo sapiens CRM1 protein protein.
Length = 1071
Score = 142 bits (343), Expect = 8e-34
Identities = 64/80 (80%), Positives = 72/80 (90%)
Frame = +1
Query: 13 VPEAREPEVLSCMAAIVHRLEGHITSEVPKIFDAVFECTLEMINKDFEEYPEHRTEFFLL 192
VP AREPEVLS MA IV++L GHIT+E+P+IFDAVFECTL MINKDFEEYPEHRT FFLL
Sbjct: 792 VPAAREPEVLSTMAIIVNKLGGHITAEIPQIFDAVFECTLNMINKDFEEYPEHRTNFFLL 851
Query: 193 LQAVNTNCFKAFLSIPPAQF 252
LQAVN++CF AFL+IPP QF
Sbjct: 852 LQAVNSHCFPAFLAIPPTQF 871
Score = 140 bits (338), Expect = 3e-33
Identities = 67/105 (63%), Positives = 80/105 (76%)
Frame = +3
Query: 183 FLITAGGQYKLFQSIFEHTTSTIQLVLDSIIWAFKHTMRNVADTGLQILYRLLLNVEEHP 362
FL+ F + + +LVLDSIIWAFKHTMRNVADTGLQIL+ LL NV +
Sbjct: 849 FLLLQAVNSHCFPAFLAIPPTQFKLVLDSIIWAFKHTMRNVADTGLQILFTLLQNVAQEE 908
Query: 363 QAAQSFYRTYLCDILEHVFSVVTDTSHGAGLTMHATILAHIFSLV 497
AAQSFY+TY CDIL+H+FSVVTDTSH AGLTMHA+ILA++F+LV
Sbjct: 909 AAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLV 953
>BC032847-1|AAH32847.1| 1071|Homo sapiens XPO1 protein protein.
Length = 1071
Score = 142 bits (343), Expect = 8e-34
Identities = 64/80 (80%), Positives = 72/80 (90%)
Frame = +1
Query: 13 VPEAREPEVLSCMAAIVHRLEGHITSEVPKIFDAVFECTLEMINKDFEEYPEHRTEFFLL 192
VP AREPEVLS MA IV++L GHIT+E+P+IFDAVFECTL MINKDFEEYPEHRT FFLL
Sbjct: 792 VPAAREPEVLSTMAIIVNKLGGHITAEIPQIFDAVFECTLNMINKDFEEYPEHRTNFFLL 851
Query: 193 LQAVNTNCFKAFLSIPPAQF 252
LQAVN++CF AFL+IPP QF
Sbjct: 852 LQAVNSHCFPAFLAIPPTQF 871
Score = 140 bits (338), Expect = 3e-33
Identities = 67/105 (63%), Positives = 80/105 (76%)
Frame = +3
Query: 183 FLITAGGQYKLFQSIFEHTTSTIQLVLDSIIWAFKHTMRNVADTGLQILYRLLLNVEEHP 362
FL+ F + + +LVLDSIIWAFKHTMRNVADTGLQIL+ LL NV +
Sbjct: 849 FLLLQAVNSHCFPAFLAIPPTQFKLVLDSIIWAFKHTMRNVADTGLQILFTLLQNVAQEE 908
Query: 363 QAAQSFYRTYLCDILEHVFSVVTDTSHGAGLTMHATILAHIFSLV 497
AAQSFY+TY CDIL+H+FSVVTDTSH AGLTMHA+ILA++F+LV
Sbjct: 909 AAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLV 953
>AC016727-1|AAY14949.1| 1071|Homo sapiens unknown protein.
Length = 1071
Score = 142 bits (343), Expect = 8e-34
Identities = 64/80 (80%), Positives = 72/80 (90%)
Frame = +1
Query: 13 VPEAREPEVLSCMAAIVHRLEGHITSEVPKIFDAVFECTLEMINKDFEEYPEHRTEFFLL 192
VP AREPEVLS MA IV++L GHIT+E+P+IFDAVFECTL MINKDFEEYPEHRT FFLL
Sbjct: 792 VPAAREPEVLSTMAIIVNKLGGHITAEIPQIFDAVFECTLNMINKDFEEYPEHRTNFFLL 851
Query: 193 LQAVNTNCFKAFLSIPPAQF 252
LQAVN++CF AFL+IPP QF
Sbjct: 852 LQAVNSHCFPAFLAIPPTQF 871
Score = 140 bits (338), Expect = 3e-33
Identities = 67/105 (63%), Positives = 80/105 (76%)
Frame = +3
Query: 183 FLITAGGQYKLFQSIFEHTTSTIQLVLDSIIWAFKHTMRNVADTGLQILYRLLLNVEEHP 362
FL+ F + + +LVLDSIIWAFKHTMRNVADTGLQIL+ LL NV +
Sbjct: 849 FLLLQAVNSHCFPAFLAIPPTQFKLVLDSIIWAFKHTMRNVADTGLQILFTLLQNVAQEE 908
Query: 363 QAAQSFYRTYLCDILEHVFSVVTDTSHGAGLTMHATILAHIFSLV 497
AAQSFY+TY CDIL+H+FSVVTDTSH AGLTMHA+ILA++F+LV
Sbjct: 909 AAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLV 953
>BC119680-1|AAI19681.1| 316|Homo sapiens ZNF101 protein protein.
Length = 316
Score = 31.1 bits (67), Expect = 2.2
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -1
Query: 88 KLYVLQVCARLLPCKTVLQAHE 23
KLY Q CA++ C T LQAHE
Sbjct: 188 KLYECQKCAKVFRCPTSLQAHE 209
>BC011502-1|AAH11502.2| 373|Homo sapiens ZNF101 protein protein.
Length = 373
Score = 31.1 bits (67), Expect = 2.2
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -1
Query: 88 KLYVLQVCARLLPCKTVLQAHE 23
KLY Q CA++ C T LQAHE
Sbjct: 245 KLYECQKCAKVFRCPTSLQAHE 266
>AY149174-1|AAN46749.1| 436|Homo sapiens zinc finger protein 12
protein.
Length = 436
Score = 31.1 bits (67), Expect = 2.2
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -1
Query: 88 KLYVLQVCARLLPCKTVLQAHE 23
KLY Q CA++ C T LQAHE
Sbjct: 308 KLYECQKCAKVFRCPTSLQAHE 329
>AL096747-1|CAB46422.1| 232|Homo sapiens hypothetical protein
protein.
Length = 232
Score = 31.1 bits (67), Expect = 2.2
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -1
Query: 88 KLYVLQVCARLLPCKTVLQAHE 23
KLY Q CA++ C T LQAHE
Sbjct: 188 KLYECQKCAKVFRCPTSLQAHE 209
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,422,780
Number of Sequences: 237096
Number of extensions: 1746045
Number of successful extensions: 3883
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3883
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -