Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1416
         (808 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    26   0.31 
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   2.9  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   5.0  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   5.0  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   8.7  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   8.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 26.2 bits (55), Expect = 0.31
 Identities = 20/71 (28%), Positives = 29/71 (40%)
 Frame = +3

Query: 63   WSRTKRCPSRRMITRKTRIS*TPIALS*STMPLNKTRTWRTKCARSATWRQNKTVSYVNF 242
            W ++ +C  ++    K   S        S  P + T  W+TK   S T R   TVS +  
Sbjct: 1146 WPKSAKCEEKKP-GHKPSTSSWQKPTKPSYRPPSTTNHWQTKTTTSTTTRPTTTVSQLID 1204

Query: 243  VINTSIQNYPY 275
                S Q YP+
Sbjct: 1205 DKCDSGQYYPH 1215


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -1

Query: 67  LHWIEEIRERHQERFFI 17
           L+W++EI   H + +F+
Sbjct: 440 LYWVDEILANHNDVYFV 456


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 299 ILFHCIILVWIVLNRG 252
           I F+C+ L++I+ N G
Sbjct: 318 IAFYCMTLLYIICNEG 333


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 299 ILFHCIILVWIVLNRG 252
           I F+C+ L++I+ N G
Sbjct: 318 IAFYCMTLLYIICNEG 333


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 6/16 (37%), Positives = 8/16 (50%)
 Frame = -1

Query: 643 YHRSPKHSNGRHWIET 596
           Y   PK  N  HW+ +
Sbjct: 148 YSIKPKERNSNHWVRS 163


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 6/16 (37%), Positives = 8/16 (50%)
 Frame = -1

Query: 643 YHRSPKHSNGRHWIET 596
           Y   PK  N  HW+ +
Sbjct: 104 YSIKPKERNSNHWVRS 119


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,305
Number of Sequences: 336
Number of extensions: 3398
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21999028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)