Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1416
         (808 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS...    24   4.8  
AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.    24   4.8  
AY330182-1|AAQ16288.1|  181|Anopheles gambiae odorant-binding pr...    24   6.3  

>Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS11
           protein.
          Length = 151

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +1

Query: 253 PLFKTIHTNIMQ*NKILSSTSRFSE 327
           PL KT+  N+++ +K+  S  +FS+
Sbjct: 126 PLSKTVRFNVLKESKMAGSKKKFSK 150


>AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.
          Length = 391

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
 Frame = +1

Query: 253 PLFKTIHTNIM--Q*NKILSSTSRFSERHDANPSSSIRISDVV*HFDASLKRFR 408
           PL K     I   Q N +  +  R+  ++ A+P+ S+   DVV   DA++  F+
Sbjct: 59  PLNKYCENKIQADQYNLVPLTCIRWRSQNPASPAGSLGGKDVVSKIDAAMANFK 112


>AY330182-1|AAQ16288.1|  181|Anopheles gambiae odorant-binding
           protein AgamOBP56 protein.
          Length = 181

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 9/41 (21%), Positives = 23/41 (56%)
 Frame = +2

Query: 104 AENQNILNSNRFELINDASEQDENMANEVREICYMATKQNC 226
           +E Q+     +++  NDA+ ++    +E+++ C+M  +  C
Sbjct: 22  SEVQDDKCKRKYKCCNDANTENMEKIHEIKKQCFMEMEVIC 62


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 751,962
Number of Sequences: 2352
Number of extensions: 13879
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85239615
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)