Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1413
(700 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory recept... 25 0.45
DQ493452-1|ABF48588.1| 305|Tribolium castaneum hedgehog protein. 24 1.0
AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory recept... 24 1.4
AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory recept... 24 1.4
AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory recept... 24 1.4
AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory recept... 24 1.4
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 23 1.8
EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggeri... 23 3.2
EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggeri... 23 3.2
AM712901-1|CAN84640.1| 205|Tribolium castaneum hypothetical pro... 21 9.7
AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory recept... 21 9.7
AJ606487-1|CAE55183.1| 203|Tribolium castaneum Giant protein pr... 21 9.7
>AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory receptor
candidate 48 protein.
Length = 408
Score = 25.4 bits (53), Expect = 0.45
Identities = 10/34 (29%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -1
Query: 577 QTIFQLLNFVLVYS-QEIYVNMHSYRVVNIGWTL 479
Q +F F+ +++ IY ++H ++N G+TL
Sbjct: 142 QLVFVFCYFIYLFTVYYIYYSVHEASIINFGYTL 175
>DQ493452-1|ABF48588.1| 305|Tribolium castaneum hedgehog protein.
Length = 305
Score = 24.2 bits (50), Expect = 1.0
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 335 ELKHGENVIELEYTEQQRRKFILDYTPRKTNLRVTPVYII 454
EL E ++ L+Y Q+R+F+ L VTP +++
Sbjct: 145 ELVFSEVLLFLDYNPSQKRQFLHITLASGRTLTVTPSHLL 184
>AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory receptor
candidate 61 protein.
Length = 670
Score = 23.8 bits (49), Expect = 1.4
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 394 FPALLFCVLKFNHIFSMF*FNYC 326
FP ++ C+++FN I +F F YC
Sbjct: 255 FPIIIGCLIQFNTI--VFSFCYC 275
>AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory receptor
candidate 30 protein.
Length = 394
Score = 23.8 bits (49), Expect = 1.4
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -1
Query: 379 FCVLKFNHIFSMF*FNYCLKLSIMDIPLRFTLCPVVCD 266
F + ++HIFS+ +N + L + I L+ T V D
Sbjct: 194 FGKMSYSHIFSLMDYNIVMALVLQFITLQHTFIWVFND 231
>AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory receptor
candidate 29 protein.
Length = 429
Score = 23.8 bits (49), Expect = 1.4
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -1
Query: 379 FCVLKFNHIFSMF*FNYCLKLSIMDIPLRFTLCPVVCD 266
F + ++HIFS+ +N + L + I L+ T V D
Sbjct: 194 FGKMSYSHIFSLMDYNIVMALVLQFITLQHTFIWVFND 231
>AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory receptor
candidate 7 protein.
Length = 429
Score = 23.8 bits (49), Expect = 1.4
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -1
Query: 379 FCVLKFNHIFSMF*FNYCLKLSIMDIPLRFTLCPVVCD 266
F + ++HIFS+ +N + L + I L+ T V D
Sbjct: 194 FGKMSYSHIFSLMDYNIVMALVLQFITLQHTFIWVFND 231
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 23.4 bits (48), Expect = 1.8
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 39 APPAPTVLPPRRLCALHTNSIMVMDNR 119
+PPAP+ LP + L+ N+++ N+
Sbjct: 73 SPPAPSELPALKSRKLNNNNVVSSTNQ 99
>EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggering
hormone receptorisoform B protein.
Length = 451
Score = 22.6 bits (46), Expect = 3.2
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = +3
Query: 93 NSIMVMDNRTSYDSENEQNSSIFVTNFQNGDSVNYSVVLLKGII 224
+S + + N +S + NE +SS+F + V +++ G+I
Sbjct: 41 SSTIDLYNTSSVSNFNESSSSVFPNYIRTTSMVFCIIIMCLGVI 84
>EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggering
hormone receptorisoform A protein.
Length = 434
Score = 22.6 bits (46), Expect = 3.2
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = +3
Query: 93 NSIMVMDNRTSYDSENEQNSSIFVTNFQNGDSVNYSVVLLKGII 224
+S + + N +S + NE +SS+F + V +++ G+I
Sbjct: 41 SSTIDLYNTSSVSNFNESSSSVFPNYIRTTSMVFCIIIMCLGVI 84
>AM712901-1|CAN84640.1| 205|Tribolium castaneum hypothetical
protein protein.
Length = 205
Score = 21.0 bits (42), Expect = 9.7
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 378 SVYSSSITFSPCFNS 334
++ +SS+T CFNS
Sbjct: 52 TILTSSVTLHVCFNS 66
>AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory receptor
candidate 1 protein.
Length = 373
Score = 21.0 bits (42), Expect = 9.7
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -1
Query: 382 LFCVLKFNHIFSMF 341
+FC++ FNH S F
Sbjct: 22 IFCLVNFNHRESYF 35
>AJ606487-1|CAE55183.1| 203|Tribolium castaneum Giant protein
protein.
Length = 203
Score = 21.0 bits (42), Expect = 9.7
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -2
Query: 387 RCCSVYSSSITFSPCFNS 334
RC +Y S +SP NS
Sbjct: 32 RCPPIYEPSCQYSPVSNS 49
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,614
Number of Sequences: 336
Number of extensions: 4215
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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