Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1413
         (700 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE006465-11|AAK61265.1|  436|Homo sapiens unknown protein.             33   1.3  
M95712-1|AAA35609.2|  766|Homo sapiens B-raf protein protein.          31   5.2  
BC112079-1|AAI12080.1|  766|Homo sapiens v-raf murine sarcoma vi...    31   5.2  
BC101757-1|AAI01758.1|  766|Homo sapiens v-raf murine sarcoma vi...    31   5.2  
AC006344-3|AAD43193.1|  651|Homo sapiens WUGSC:H_DJ0726N20.3 pro...    31   5.2  

>AE006465-11|AAK61265.1|  436|Homo sapiens unknown protein.
          Length = 436

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 13/20 (65%), Positives = 13/20 (65%)
 Frame = +2

Query: 41  TARTHSPPAAPALCATHEQH 100
           TARTH PP APALC     H
Sbjct: 151 TARTHGPPGAPALCPAVPPH 170


>M95712-1|AAA35609.2|  766|Homo sapiens B-raf protein protein.
          Length = 766

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
 Frame = -3

Query: 350 LHV-LIQLLP*TLHYGHPIAFYFVSRCL*LNRLLFLGITV*TCYYSFKKNNRIVNAVSIL 174
           LHV +++ +P T H      F+ ++ C    +LLF G    TC Y F  + R    V ++
Sbjct: 222 LHVEVLENVPLTTHNFVRKTFFTLAFCDFCRKLLFQGFRCQTCGYKF--HQRCSTEVPLM 279

Query: 173 KVCYENR*VLFV 138
            V Y+   +LFV
Sbjct: 280 CVNYDQLDLLFV 291


>BC112079-1|AAI12080.1|  766|Homo sapiens v-raf murine sarcoma viral
           oncogene homolog B1 protein.
          Length = 766

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
 Frame = -3

Query: 350 LHV-LIQLLP*TLHYGHPIAFYFVSRCL*LNRLLFLGITV*TCYYSFKKNNRIVNAVSIL 174
           LHV +++ +P T H      F+ ++ C    +LLF G    TC Y F  + R    V ++
Sbjct: 222 LHVEVLENVPLTTHNFVRKTFFTLAFCDFCRKLLFQGFRCQTCGYKF--HQRCSTEVPLM 279

Query: 173 KVCYENR*VLFV 138
            V Y+   +LFV
Sbjct: 280 CVNYDQLDLLFV 291


>BC101757-1|AAI01758.1|  766|Homo sapiens v-raf murine sarcoma viral
           oncogene homolog B1 protein.
          Length = 766

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
 Frame = -3

Query: 350 LHV-LIQLLP*TLHYGHPIAFYFVSRCL*LNRLLFLGITV*TCYYSFKKNNRIVNAVSIL 174
           LHV +++ +P T H      F+ ++ C    +LLF G    TC Y F  + R    V ++
Sbjct: 222 LHVEVLENVPLTTHNFVRKTFFTLAFCDFCRKLLFQGFRCQTCGYKF--HQRCSTEVPLM 279

Query: 173 KVCYENR*VLFV 138
            V Y+   +LFV
Sbjct: 280 CVNYDQLDLLFV 291


>AC006344-3|AAD43193.1|  651|Homo sapiens WUGSC:H_DJ0726N20.3
           protein.
          Length = 651

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
 Frame = -3

Query: 350 LHV-LIQLLP*TLHYGHPIAFYFVSRCL*LNRLLFLGITV*TCYYSFKKNNRIVNAVSIL 174
           LHV +++ +P T H      F+ ++ C    +LLF G    TC Y F  + R    V ++
Sbjct: 67  LHVEVLENVPLTTHNFVRKTFFTLAFCDFCRKLLFQGFRCQTCGYKF--HQRCSTEVPLM 124

Query: 173 KVCYENR*VLFV 138
            V Y+   +LFV
Sbjct: 125 CVNYDQLDLLFV 136


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,206,105
Number of Sequences: 237096
Number of extensions: 2176547
Number of successful extensions: 4416
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4416
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)