Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1413
         (700 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2152|AAF48457.2|  526|Drosophila melanogaster CG6294-PA...    32   0.65 
BT024336-1|ABC86398.1|  271|Drosophila melanogaster IP10110p pro...    29   6.1  
AE014134-1566|AAO41172.1|  257|Drosophila melanogaster CG32987-P...    29   6.1  

>AE014298-2152|AAF48457.2|  526|Drosophila melanogaster CG6294-PA
           protein.
          Length = 526

 Score = 32.3 bits (70), Expect = 0.65
 Identities = 21/98 (21%), Positives = 42/98 (42%), Gaps = 8/98 (8%)
 Frame = +2

Query: 251 KVICSITNNGTQSKTQWDVHNGEFKAIIELKHGENVIELEYTE--------QQRRKFILD 406
           K I  +  + +Q +       GEFK + +L+      E E +            R     
Sbjct: 47  KAILDLPEHLSQEQLTQLSAGGEFKLLFDLEQANREEEEEESACLLELRSCTATRTISFS 106

Query: 407 YTPRKTNLRVTPVYIICQGHDGCFQSPSDIDNSIRVHV 520
           Y PR+++ RV P+Y++CQ  +       ++ + I +++
Sbjct: 107 YRPRRSSYRVQPLYLLCQDEEKTLAQQHEVHSLIDLNL 144


>BT024336-1|ABC86398.1|  271|Drosophila melanogaster IP10110p
           protein.
          Length = 271

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = -3

Query: 449 CRQVLPLDSFFSVCNLK*ISGVVVLCTQVQS-HFLHVLIQLL 327
           C   +P  S++S C    ++G+VV+CT +   HF+H L  L+
Sbjct: 87  CMHCIPRISYYSPCKWF-MTGLVVVCTTLFGCHFIHDLSPLI 127


>AE014134-1566|AAO41172.1|  257|Drosophila melanogaster CG32987-PA
           protein.
          Length = 257

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = -3

Query: 449 CRQVLPLDSFFSVCNLK*ISGVVVLCTQVQS-HFLHVLIQLL 327
           C   +P  S++S C    ++G+VV+CT +   HF+H L  L+
Sbjct: 73  CMHCIPRISYYSPCKWF-MTGLVVVCTTLFGCHFIHDLSPLI 113


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,999,373
Number of Sequences: 53049
Number of extensions: 720572
Number of successful extensions: 1824
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1824
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)