Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1412
         (706 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.0  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   4.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.6  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   9.8  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +3

Query: 465 KNDFLEINKKIFINIFQSLNDLCFGHSKY 551
           +ND+L++   IF++   + N +C  H  Y
Sbjct: 902 ENDWLQLGYLIFVSTLYTANVVCICHVCY 930


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/42 (23%), Positives = 18/42 (42%)
 Frame = -2

Query: 648 FSTGKNNIRNXXXXXXXXXXXXXFQLTNLNPFYIWNVQNTSR 523
           ++    N R+              Q T+L PF  W++ N++R
Sbjct: 334 YTASSKNYRSATGGNSASNSSGDAQSTSLRPFSRWSLCNSAR 375


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 6/21 (28%), Positives = 13/21 (61%)
 Frame = +2

Query: 152 YKLLRFTIYFVEVIVFKYFFY 214
           Y  + FT++ + ++   YF+Y
Sbjct: 243 YAFILFTVHLLLLVCIYYFYY 263



 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 167 FTIYFVEVIVFKYFFYY 217
           F I+ V  ++  Y+FYY
Sbjct: 89  FIIFTVHFLLCTYYFYY 105


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = -1

Query: 121 YKLVLRFVSPFCNIFYMFI*MFVSMYRHKVNYI 23
           Y  +L+ V  FC   Y+F   ++    H+ + I
Sbjct: 137 YVSLLQLVFVFCYFIYLFTVYYIYYSVHEASII 169


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,260
Number of Sequences: 336
Number of extensions: 3079
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)