Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1412
         (706 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   1.8  
AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative deoxynucl...    23   7.1  
AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate deo...    23   7.1  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -1

Query: 142 FWEY*HVYKLVLRFVSPFCNIFYMFI*MFVSMY 44
           +WE  ++Y+LVLR   P+  +F++ I    S Y
Sbjct: 387 YWE--NLYQLVLRSAGPWHMLFFIVIIFLGSFY 417


>AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative
           deoxynucleoside kinase protein.
          Length = 245

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 489 KKIFINIFQSLNDLC 533
           K  F+N FQ  ND+C
Sbjct: 29  KTTFLNHFQKFNDIC 43


>AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate
           deoxyribonucleoside kinaseprotein.
          Length = 246

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 489 KKIFINIFQSLNDLC 533
           K  F+N FQ  ND+C
Sbjct: 29  KTTFLNHFQKFNDIC 43


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 595,491
Number of Sequences: 2352
Number of extensions: 10552
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)