Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1411
         (807 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    24   4.8  
AY146716-1|AAO12076.1|  159|Anopheles gambiae odorant-binding pr...    23   8.4  
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    23   8.4  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    23   8.4  

>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 12/32 (37%), Positives = 12/32 (37%)
 Frame = +1

Query: 7   PRPSEPKPTSPARGAPCRPTNEALARRGRHGT 102
           P  SEP  T       C PT   L     HGT
Sbjct: 273 PTTSEPPSTPHPTDPHCPPTGATLPNYWAHGT 304


>AY146716-1|AAO12076.1|  159|Anopheles gambiae odorant-binding
           protein AgamOBP12 protein.
          Length = 159

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 738 CNRTYFSLNICSRSTITCLIN 800
           C + Y  LN C  +TIT  +N
Sbjct: 130 CEKAYLILNQCQGNTITNSLN 150


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = -2

Query: 629 CEWYRVFDVSSIKS-YTFNLNLTYSYEL 549
           C W+   D  S K+ Y  NL ++ SY+L
Sbjct: 432 CNWWFYVDCKSSKNLYDSNLPVSKSYQL 459


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = -2

Query: 629 CEWYRVFDVSSIKS-YTFNLNLTYSYEL 549
           C W+   D  S K+ Y  NL ++ SY+L
Sbjct: 440 CNWWFYVDCKSSKNLYDSNLPVSKSYQL 467


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 770,859
Number of Sequences: 2352
Number of extensions: 14941
Number of successful extensions: 26
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85239615
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)