Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1408
         (751 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC103982-1|AAI03983.1|  337|Homo sapiens zinc finger, DHHC-type ...    30   7.7  
BC103981-1|AAI03982.1|  337|Homo sapiens zinc finger, DHHC-type ...    30   7.7  
BC103980-1|AAI03981.1|  337|Homo sapiens zinc finger, DHHC-type ...    30   7.7  
AL137013-4|CAI40090.1|  337|Homo sapiens novel protein protein.        30   7.7  
AK056374-1|BAB71168.1|  337|Homo sapiens protein ( Homo sapiens ...    30   7.7  

>BC103982-1|AAI03983.1|  337|Homo sapiens zinc finger, DHHC-type
           containing 15 protein.
          Length = 337

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +2

Query: 635 YFLHYLNGETYSE*CKLNFKIILFVCCFFLVS 730
           YF+ Y  GE  S   K +   +LFV C F VS
Sbjct: 195 YFIKYWRGELPSVRSKFHVLFLLFVACMFFVS 226


>BC103981-1|AAI03982.1|  337|Homo sapiens zinc finger, DHHC-type
           containing 15 protein.
          Length = 337

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +2

Query: 635 YFLHYLNGETYSE*CKLNFKIILFVCCFFLVS 730
           YF+ Y  GE  S   K +   +LFV C F VS
Sbjct: 195 YFIKYWRGELPSVRSKFHVLFLLFVACMFFVS 226


>BC103980-1|AAI03981.1|  337|Homo sapiens zinc finger, DHHC-type
           containing 15 protein.
          Length = 337

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +2

Query: 635 YFLHYLNGETYSE*CKLNFKIILFVCCFFLVS 730
           YF+ Y  GE  S   K +   +LFV C F VS
Sbjct: 195 YFIKYWRGELPSVRSKFHVLFLLFVACMFFVS 226


>AL137013-4|CAI40090.1|  337|Homo sapiens novel protein protein.
          Length = 337

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +2

Query: 635 YFLHYLNGETYSE*CKLNFKIILFVCCFFLVS 730
           YF+ Y  GE  S   K +   +LFV C F VS
Sbjct: 195 YFIKYWRGELPSVRSKFHVLFLLFVACMFFVS 226


>AK056374-1|BAB71168.1|  337|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31812 fis, clone NT2RI2009406, moderately
           similar to Homo sapiens rec mRNA. ).
          Length = 337

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +2

Query: 635 YFLHYLNGETYSE*CKLNFKIILFVCCFFLVS 730
           YF+ Y  GE  S   K +   +LFV C F VS
Sbjct: 195 YFIKYWRGELPSVRSKFHVLFLLFVACMFFVS 226


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,868,000
Number of Sequences: 237096
Number of extensions: 1973584
Number of successful extensions: 2868
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2866
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)