Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1406
(786 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 56 4e-08
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 49 4e-06
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 46 3e-05
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 44 1e-04
12_02_1282 + 27528159-27529148,27529549-27529614 43 2e-04
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 43 3e-04
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 42 6e-04
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 42 6e-04
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 42 6e-04
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 42 7e-04
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 40 0.002
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 40 0.003
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 33 0.19
01_06_1116 + 34629592-34630578,34631058-34631686,34632589-34632679 30 1.8
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 29 3.2
02_01_0717 + 5351504-5351602,5353401-5353499,5353574-5353675,535... 29 4.2
04_03_0738 + 19169764-19169897,19169987-19170116,19170614-191706... 29 5.5
05_03_0482 - 14568108-14568284,14568912-14569970,14570532-145712... 28 9.7
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 55.6 bits (128), Expect = 4e-08
Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 8/114 (7%)
Frame = +3
Query: 450 IQQRMLPSQLQ*HPADHNRAL----FNFASIQEAMTEIFFEEYECQSLLRINATDLAE-Y 614
+ +R++ + LQ P + + L FN ++Q A E+ FEE +SL +A L Y
Sbjct: 80 VWERVIRNLLQVDPNNSSLLLVEPQFNPPALQHATDELVFEELGFKSLCVADAPSLVHLY 139
Query: 615 NYRRT---HKNDCTVVVDSGYSFTYIVPYINGKKYKDAIIRIDVGGKVLTNH*K 767
R + C++VVD G+SFT+ P + A+ R+D+GGK LTN+ K
Sbjct: 140 EASRQPSLFRAQCSLVVDCGFSFTHASPVLQNFTLNYAVRRMDLGGKALTNYLK 193
Score = 41.1 bits (92), Expect = 0.001
Identities = 22/87 (25%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Frame = +1
Query: 256 KVGFSN--SKSRIIPNCIMKAKSERRRPFIGSQLD-ECRDASGLFYILPFQKGFLVNWDT 426
K GF + + ++PNC+ K ++ + QL + D +G+ P +G+L+N +
Sbjct: 18 KAGFGGDMNPTAVVPNCMAKPPGSKKW-LVADQLQAQDVDVTGMTLRRPIDRGYLINQEV 76
Query: 427 QKTVWDFIFSKECCPVNFNDTPLIITE 507
Q+ VW+ + + V+ N++ L++ E
Sbjct: 77 QREVWERVI-RNLLQVDPNNSSLLLVE 102
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 49.2 bits (112), Expect = 4e-06
Identities = 30/92 (32%), Positives = 46/92 (50%)
Frame = +3
Query: 486 HPADHNRALFNFASIQEAMTEIFFEEYECQSLLRINATDLAEYNYRRTHKNDCTVVVDSG 665
HP A N + +E MT+I FE + C ++ L+ Y RT +V+DSG
Sbjct: 102 HPVLLTEAPLNPKANREKMTQIMFETFNCPAMYVAIQAVLSLYASGRT----TGIVLDSG 157
Query: 666 YSFTYIVPYINGKKYKDAIIRIDVGGKVLTNH 761
++ VP G AI+R+D+ G+ LT+H
Sbjct: 158 DGVSHTVPIYEGYTLPHAILRLDLAGRDLTDH 189
Score = 31.5 bits (68), Expect = 0.79
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 352 DECRDASGLFYI-LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITE 507
DE + G+ + P + G + NWD + +W F E V D P+++TE
Sbjct: 57 DEAQAKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNE-LRVAPEDHPVLLTE 108
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 46.0 bits (104), Expect = 3e-05
Identities = 29/92 (31%), Positives = 46/92 (50%)
Frame = +3
Query: 486 HPADHNRALFNFASIQEAMTEIFFEEYECQSLLRINATDLAEYNYRRTHKNDCTVVVDSG 665
HP A N + +E MT+I FE + C ++ L+ Y RT +V+DSG
Sbjct: 102 HPVLLTEAPMNPKANREKMTQIMFETFNCPAMYVAIQAVLSLYASGRT----TGIVLDSG 157
Query: 666 YSFTYIVPYINGKKYKDAIIRIDVGGKVLTNH 761
++ VP G AI+R+D+ G+ LT++
Sbjct: 158 DGVSHTVPIYEGFTLPHAILRLDLAGRDLTDN 189
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 352 DECRDASGLFYI-LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITE 507
DE + G+ + P + G + NWD + +W F E V + P+++TE
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTE 108
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 44.0 bits (99), Expect = 1e-04
Identities = 29/91 (31%), Positives = 45/91 (49%)
Frame = +3
Query: 486 HPADHNRALFNFASIQEAMTEIFFEEYECQSLLRINATDLAEYNYRRTHKNDCTVVVDSG 665
HPA A N + +E MT+I FE + ++ L+ Y RT +V+DSG
Sbjct: 103 HPALLTEAPLNPKANREKMTQIMFESFNVPAMYVAIQAVLSLYASGRT----TGIVLDSG 158
Query: 666 YSFTYIVPYINGKKYKDAIIRIDVGGKVLTN 758
++ VP G AI+R+D+ G+ LT+
Sbjct: 159 DGVSHTVPIYEGYALPHAILRLDLAGRDLTD 189
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +1
Query: 352 DECRDASGLFYI-LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITE 507
DE + G+ + P + G + NWD + +W F E V + P ++TE
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNE-LRVAPEEHPALLTE 109
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/92 (30%), Positives = 45/92 (48%)
Frame = +3
Query: 486 HPADHNRALFNFASIQEAMTEIFFEEYECQSLLRINATDLAEYNYRRTHKNDCTVVVDSG 665
HP A N + +E MT+I FE + ++ L+ Y RT +V+DSG
Sbjct: 103 HPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRT----TGIVLDSG 158
Query: 666 YSFTYIVPYINGKKYKDAIIRIDVGGKVLTNH 761
++ VP G AI+R+D+ G+ LT++
Sbjct: 159 DGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 190
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +1
Query: 352 DECRDASGLFYI-LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITERFLTLPQ 528
DE + G+ + P + G + NWD + +W F E V + P+++TE L
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKA 116
Query: 529 YKRR*RKYSSKNTNASRCY 585
+ + + + NA Y
Sbjct: 117 NREKMTQIMFETFNAPAMY 135
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 42.7 bits (96), Expect = 3e-04
Identities = 28/92 (30%), Positives = 45/92 (48%)
Frame = +3
Query: 486 HPADHNRALFNFASIQEAMTEIFFEEYECQSLLRINATDLAEYNYRRTHKNDCTVVVDSG 665
HP A N + +E MT+I FE + ++ L+ Y RT +V+DSG
Sbjct: 103 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT----TGIVLDSG 158
Query: 666 YSFTYIVPYINGKKYKDAIIRIDVGGKVLTNH 761
++ VP G AI+R+D+ G+ LT++
Sbjct: 159 DGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 190
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 352 DECRDASGLFYI-LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITE 507
DE + G+ + P + G + NWD + +W F E V + P+++TE
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTE 109
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 41.9 bits (94), Expect = 6e-04
Identities = 28/91 (30%), Positives = 44/91 (48%)
Frame = +3
Query: 486 HPADHNRALFNFASIQEAMTEIFFEEYECQSLLRINATDLAEYNYRRTHKNDCTVVVDSG 665
HP A N + +E MT+I FE + ++ L+ Y RT +V+DSG
Sbjct: 103 HPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRT----TGIVLDSG 158
Query: 666 YSFTYIVPYINGKKYKDAIIRIDVGGKVLTN 758
++ VP G AI+R+D+ G+ LT+
Sbjct: 159 DGVSHTVPIYEGYALPHAILRLDLAGRDLTD 189
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 352 DECRDASGLFYI-LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITE 507
DE + G+ + P + G + NWD + +W F E V + P+++TE
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTE 109
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 41.9 bits (94), Expect = 6e-04
Identities = 28/91 (30%), Positives = 44/91 (48%)
Frame = +3
Query: 486 HPADHNRALFNFASIQEAMTEIFFEEYECQSLLRINATDLAEYNYRRTHKNDCTVVVDSG 665
HP A N + +E MT+I FE + ++ L+ Y RT +V+DSG
Sbjct: 103 HPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRT----TGIVLDSG 158
Query: 666 YSFTYIVPYINGKKYKDAIIRIDVGGKVLTN 758
++ VP G AI+R+D+ G+ LT+
Sbjct: 159 DGVSHTVPIYEGYALPHAILRLDLAGRDLTD 189
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 352 DECRDASGLFYI-LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITE 507
DE + G+ + P + G + NWD + +W F E V + P+++TE
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTE 109
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 41.9 bits (94), Expect = 6e-04
Identities = 28/91 (30%), Positives = 44/91 (48%)
Frame = +3
Query: 486 HPADHNRALFNFASIQEAMTEIFFEEYECQSLLRINATDLAEYNYRRTHKNDCTVVVDSG 665
HP A N + +E MT+I FE + ++ L+ Y RT +V+DSG
Sbjct: 103 HPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRT----TGIVLDSG 158
Query: 666 YSFTYIVPYINGKKYKDAIIRIDVGGKVLTN 758
++ VP G AI+R+D+ G+ LT+
Sbjct: 159 DGVSHTVPIYEGYALPHAILRLDLAGRDLTD 189
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 352 DECRDASGLFYI-LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITE 507
DE + G+ + P + G + NWD + +W F E V + P+++TE
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTE 109
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 41.5 bits (93), Expect = 7e-04
Identities = 28/91 (30%), Positives = 44/91 (48%)
Frame = +3
Query: 486 HPADHNRALFNFASIQEAMTEIFFEEYECQSLLRINATDLAEYNYRRTHKNDCTVVVDSG 665
HP A N + +E MT+I FE + ++ L+ Y RT +V+DSG
Sbjct: 103 HPILLTEAPLNPKANREKMTQIMFETFSVPAMYVAIQAVLSLYASGRT----TGIVLDSG 158
Query: 666 YSFTYIVPYINGKKYKDAIIRIDVGGKVLTN 758
++ VP G AI+R+D+ G+ LT+
Sbjct: 159 DGVSHTVPIYEGYALPHAILRLDLAGRDLTD 189
Score = 31.5 bits (68), Expect = 0.79
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 352 DECRDASGLFYI-LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITE 507
DE + G+ + P + G + NWD + +W F E V + P+++TE
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNE-LRVAPEEHPILLTE 109
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 40.3 bits (90), Expect = 0.002
Identities = 28/91 (30%), Positives = 43/91 (47%)
Frame = +3
Query: 486 HPADHNRALFNFASIQEAMTEIFFEEYECQSLLRINATDLAEYNYRRTHKNDCTVVVDSG 665
HP A N + +E MT+I FE + ++ L+ Y R +V+DSG
Sbjct: 103 HPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGR-------IVLDSG 155
Query: 666 YSFTYIVPYINGKKYKDAIIRIDVGGKVLTN 758
T+ VP G AI+R+D+ G+ LT+
Sbjct: 156 DGVTHTVPIYEGYALPHAILRLDLAGRDLTD 186
Score = 31.5 bits (68), Expect = 0.79
Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +1
Query: 352 DECRDASGLFYI-LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITERFLTLPQ 528
DE + G+ + P + G + NWD + +W F E V + P+++TE L
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNE-LRVAPEEHPILLTEAPLNPKA 116
Query: 529 YKRR*RKYSSKNTNASRCY 585
+ + + + NA Y
Sbjct: 117 NREKMTQIMFETFNAPAMY 135
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/80 (28%), Positives = 44/80 (55%)
Frame = +1
Query: 268 SNSKSRIIPNCIMKAKSERRRPFIGSQLDECRDASGLFYILPFQKGFLVNWDTQKTVWDF 447
S+SK+ P + KAK++R+ ++G +L+ RD + I P + G + +WD +W+
Sbjct: 99 SDSKNGAKPMDVDKAKTKRKL-YVGQELEFRRDHMEV--ISPMKDGTVTDWDIVDNIWNH 155
Query: 448 IFSKECCPVNFNDTPLIITE 507
F + +N + P++I E
Sbjct: 156 AFRQRLL-INPEEHPMLIAE 174
Score = 30.7 bits (66), Expect = 1.4
Identities = 25/102 (24%), Positives = 45/102 (44%)
Frame = +3
Query: 453 QQRMLPSQLQ*HPADHNRALFNFASIQEAMTEIFFEEYECQSLLRINATDLAEYNYRRTH 632
+QR+L + + HP N +E E+ FE+Y+ +L L + R
Sbjct: 158 RQRLLINPEE-HPMLIAEPSTNTGQQREKAAELMFEKYKVPALFLAKNAVLTSFASGRA- 215
Query: 633 KNDCTVVVDSGYSFTYIVPYINGKKYKDAIIRIDVGGKVLTN 758
++VVDSG T + +G + ++ +GG+ LT+
Sbjct: 216 ---TSLVVDSGGGSTVVAAVHDGYVLQKSVATSPIGGEFLTD 254
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 33.5 bits (73), Expect = 0.19
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +3
Query: 648 VVVDSGYSFTYIVPYINGKKYKDAIIRIDVGGKVLTNH 761
+V+DSG T++VP ++G Y R++V G+ +T++
Sbjct: 152 LVIDSGDGVTHVVPVVDGFSYPHITKRMNVAGRHITSY 189
>01_06_1116 + 34629592-34630578,34631058-34631686,34632589-34632679
Length = 568
Score = 30.3 bits (65), Expect = 1.8
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Frame = -2
Query: 311 AFIMQLGIILDLELEKPTLPYRLRCPIYNKRSRSFSYLL---FKGYR*LLIRLDVH-LLE 144
AFI + GI +DLEL + +C + + F + K + +++ L +H L+E
Sbjct: 257 AFIDRKGITVDLELSTALIDMYAKCGLIERAKGVFDAMAERDTKAWSAMIVGLAIHGLVE 316
Query: 143 LGLKYYCK----DVQNGNVIYLG 87
+ LK + + V+ NV ++G
Sbjct: 317 VALKLFSRMLELKVRPNNVTFIG 339
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 29.5 bits (63), Expect = 3.2
Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +3
Query: 531 QEAMTEIFFEEYECQSLLRINATDLAEYNYRRTHKNDCT-VVVDSGYSFTYIVPYINGKK 707
+E EI FE + L LA T K + T VVVD G T+IVP +G
Sbjct: 136 REYTGEIMFETFNVPGLYIACQPVLALAAGYTTTKCEMTGVVVDVGDGATHIVPVADGYV 195
Query: 708 YKDAIIRIDVGGKVLT 755
+I I + GK +T
Sbjct: 196 IGSSIRSIPITGKDVT 211
>02_01_0717 +
5351504-5351602,5353401-5353499,5353574-5353675,
5353756-5353815,5353900-5354006,5354114-5354196,
5354372-5354462,5354561-5354768
Length = 282
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +1
Query: 193 NKRYENERDLLLYIGQRSLYGKVGFSNSKSRIIPNCIMKAKS 318
NK+ E DL+L I QR K F + S I+ C K S
Sbjct: 216 NKKKSEENDLILAISQRRAQRKDRFDSVLSSIMSKCDPKGSS 257
>04_03_0738 +
19169764-19169897,19169987-19170116,19170614-19170687,
19171208-19171288,19172054-19172087
Length = 150
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +1
Query: 385 ILPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITE 507
I P + G ++WD +W+ F + +N + P++I E
Sbjct: 90 ISPMKDGTFIDWDIVDNIWNHAFRQRLL-INPEEHPMLIVE 129
>05_03_0482 -
14568108-14568284,14568912-14569970,14570532-14571236,
14571376-14571656,14571748-14571769
Length = 747
Score = 27.9 bits (59), Expect = 9.7
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +1
Query: 268 SNSKSRIIPNCIMKAKSERRRPFIGSQLDEC--RDASGLFYILPFQKGFLVNWDT 426
+NS+S N +MKA + R PF Q C D L Y +PF+ ++ W+T
Sbjct: 666 NNSESARKRNKVMKAVQDLRSPF---QRLACYPLDVGTLQYGIPFRVNYMCLWNT 717
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,321,622
Number of Sequences: 37544
Number of extensions: 382612
Number of successful extensions: 782
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 772
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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