Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1406
(786 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 77 1e-14
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 77 1e-14
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 48 1e-05
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 45 7e-05
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 45 7e-05
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 45 7e-05
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 45 7e-05
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 45 7e-05
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 45 7e-05
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 45 7e-05
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 45 7e-05
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 44 9e-05
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 44 9e-05
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 43 3e-04
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 35 0.057
Z92830-1|CAB07354.1| 342|Caenorhabditis elegans Hypothetical pr... 32 0.40
Z83239-4|CAB05808.1| 336|Caenorhabditis elegans Hypothetical pr... 31 0.71
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical... 30 2.2
Z83116-3|CAB05561.1| 284|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z71186-8|CAA94917.2| 1322|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z93383-8|CAB07629.1| 286|Caenorhabditis elegans Hypothetical pr... 29 5.0
U23171-3|AAC46706.1| 1020|Caenorhabditis elegans Hypothetical pr... 29 5.0
AC006632-2|AAK85468.1| 478|Caenorhabditis elegans Hypothetical ... 28 6.6
Z92830-2|CAB07355.2| 330|Caenorhabditis elegans Hypothetical pr... 28 8.7
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 77.0 bits (181), Expect = 1e-14
Identities = 30/67 (44%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Frame = +1
Query: 256 KVGFSNSKS-RIIPNCIMKAKSERRRPFIGSQLDECRDASGLFYILPFQKGFLVNWDTQK 432
K+G +S+S R++PN I+KAK E++R F+ + +EC D LFY+ P ++G++VNWDTQ+
Sbjct: 16 KIGTIDSESPRLVPNSIVKAKHEKKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQ 75
Query: 433 TVWDFIF 453
+W+ F
Sbjct: 76 QIWEKTF 82
Score = 65.3 bits (152), Expect = 5e-11
Identities = 28/78 (35%), Positives = 49/78 (62%)
Frame = +3
Query: 525 SIQEAMTEIFFEEYECQSLLRINATDLAEYNYRRTHKNDCTVVVDSGYSFTYIVPYINGK 704
++ + +EI F+ + + + +A+ L + + + C VVVDSG+S+T + ++NG
Sbjct: 105 ALPDVSSEILFDYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGM 164
Query: 705 KYKDAIIRIDVGGKVLTN 758
+D++IRIDVGGK LTN
Sbjct: 165 LIQDSVIRIDVGGKALTN 182
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 77.0 bits (181), Expect = 1e-14
Identities = 30/67 (44%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Frame = +1
Query: 256 KVGFSNSKS-RIIPNCIMKAKSERRRPFIGSQLDECRDASGLFYILPFQKGFLVNWDTQK 432
K+G +S+S R++PN I+KAK E++R F+ + +EC D LFY+ P ++G++VNWDTQ+
Sbjct: 16 KIGTIDSESPRLVPNSIVKAKHEKKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQ 75
Query: 433 TVWDFIF 453
+W+ F
Sbjct: 76 QIWEKTF 82
Score = 65.3 bits (152), Expect = 5e-11
Identities = 28/78 (35%), Positives = 49/78 (62%)
Frame = +3
Query: 525 SIQEAMTEIFFEEYECQSLLRINATDLAEYNYRRTHKNDCTVVVDSGYSFTYIVPYINGK 704
++ + +EI F+ + + + +A+ L + + + C VVVDSG+S+T + ++NG
Sbjct: 105 ALPDVSSEILFDYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGM 164
Query: 705 KYKDAIIRIDVGGKVLTN 758
+D++IRIDVGGK LTN
Sbjct: 165 LIQDSVIRIDVGGKALTN 182
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 47.6 bits (108), Expect = 1e-05
Identities = 28/103 (27%), Positives = 53/103 (51%)
Frame = +3
Query: 447 HIQQRMLPSQLQ*HPADHNRALFNFASIQEAMTEIFFEEYECQSLLRINATDLAEYNYRR 626
H + +L S HP + + +N + +E +TEI FE+++ + L+ + R
Sbjct: 111 HSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGR 170
Query: 627 THKNDCTVVVDSGYSFTYIVPYINGKKYKDAIIRIDVGGKVLT 755
TH ++VDSG + T +VP +G A+++ +GG ++T
Sbjct: 171 THG----LMVDSGATQTSVVPVFDGYAVTHAVVKCPIGGDLIT 209
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 44.8 bits (101), Expect = 7e-05
Identities = 30/92 (32%), Positives = 45/92 (48%)
Frame = +3
Query: 486 HPADHNRALFNFASIQEAMTEIFFEEYECQSLLRINATDLAEYNYRRTHKNDCTVVVDSG 665
HP A N + +E MT+I FE + ++ L+ Y RT VV+DSG
Sbjct: 102 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT----TGVVLDSG 157
Query: 666 YSFTYIVPYINGKKYKDAIIRIDVGGKVLTNH 761
T+ VP G AI+R+D+ G+ LT++
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDY 189
Score = 31.9 bits (69), Expect = 0.53
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 352 DECRDASGLFYI-LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITE 507
DE + G+ + P + G + NWD + +W F E V + P+++TE
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTE 108
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 44.8 bits (101), Expect = 7e-05
Identities = 30/92 (32%), Positives = 45/92 (48%)
Frame = +3
Query: 486 HPADHNRALFNFASIQEAMTEIFFEEYECQSLLRINATDLAEYNYRRTHKNDCTVVVDSG 665
HP A N + +E MT+I FE + ++ L+ Y RT VV+DSG
Sbjct: 102 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT----TGVVLDSG 157
Query: 666 YSFTYIVPYINGKKYKDAIIRIDVGGKVLTNH 761
T+ VP G AI+R+D+ G+ LT++
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDY 189
Score = 31.9 bits (69), Expect = 0.53
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 352 DECRDASGLFYI-LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITE 507
DE + G+ + P + G + NWD + +W F E V + P+++TE
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTE 108
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 44.8 bits (101), Expect = 7e-05
Identities = 30/92 (32%), Positives = 45/92 (48%)
Frame = +3
Query: 486 HPADHNRALFNFASIQEAMTEIFFEEYECQSLLRINATDLAEYNYRRTHKNDCTVVVDSG 665
HP A N + +E MT+I FE + ++ L+ Y RT VV+DSG
Sbjct: 102 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT----TGVVLDSG 157
Query: 666 YSFTYIVPYINGKKYKDAIIRIDVGGKVLTNH 761
T+ VP G AI+R+D+ G+ LT++
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDY 189
Score = 31.9 bits (69), Expect = 0.53
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 352 DECRDASGLFYI-LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITE 507
DE + G+ + P + G + NWD + +W F E V + P+++TE
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTE 108
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 44.8 bits (101), Expect = 7e-05
Identities = 30/92 (32%), Positives = 45/92 (48%)
Frame = +3
Query: 486 HPADHNRALFNFASIQEAMTEIFFEEYECQSLLRINATDLAEYNYRRTHKNDCTVVVDSG 665
HP A N + +E MT+I FE + ++ L+ Y RT VV+DSG
Sbjct: 102 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT----TGVVLDSG 157
Query: 666 YSFTYIVPYINGKKYKDAIIRIDVGGKVLTNH 761
T+ VP G AI+R+D+ G+ LT++
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDY 189
Score = 31.9 bits (69), Expect = 0.53
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 352 DECRDASGLFYI-LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITE 507
DE + G+ + P + G + NWD + +W F E V + P+++TE
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTE 108
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 44.8 bits (101), Expect = 7e-05
Identities = 30/92 (32%), Positives = 45/92 (48%)
Frame = +3
Query: 486 HPADHNRALFNFASIQEAMTEIFFEEYECQSLLRINATDLAEYNYRRTHKNDCTVVVDSG 665
HP A N + +E MT+I FE + ++ L+ Y RT VV+DSG
Sbjct: 102 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT----TGVVLDSG 157
Query: 666 YSFTYIVPYINGKKYKDAIIRIDVGGKVLTNH 761
T+ VP G AI+R+D+ G+ LT++
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDY 189
Score = 31.9 bits (69), Expect = 0.53
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 352 DECRDASGLFYI-LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITE 507
DE + G+ + P + G + NWD + +W F E V + P+++TE
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTE 108
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 44.8 bits (101), Expect = 7e-05
Identities = 30/92 (32%), Positives = 45/92 (48%)
Frame = +3
Query: 486 HPADHNRALFNFASIQEAMTEIFFEEYECQSLLRINATDLAEYNYRRTHKNDCTVVVDSG 665
HP A N + +E MT+I FE + ++ L+ Y RT VV+DSG
Sbjct: 58 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT----TGVVLDSG 113
Query: 666 YSFTYIVPYINGKKYKDAIIRIDVGGKVLTNH 761
T+ VP G AI+R+D+ G+ LT++
Sbjct: 114 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDY 145
Score = 31.9 bits (69), Expect = 0.53
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 352 DECRDASGLFYI-LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITE 507
DE + G+ + P + G + NWD + +W F E V + P+++TE
Sbjct: 13 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTE 64
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 44.8 bits (101), Expect = 7e-05
Identities = 30/92 (32%), Positives = 45/92 (48%)
Frame = +3
Query: 486 HPADHNRALFNFASIQEAMTEIFFEEYECQSLLRINATDLAEYNYRRTHKNDCTVVVDSG 665
HP A N + +E MT+I FE + ++ L+ Y RT VV+DSG
Sbjct: 88 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT----TGVVLDSG 143
Query: 666 YSFTYIVPYINGKKYKDAIIRIDVGGKVLTNH 761
T+ VP G AI+R+D+ G+ LT++
Sbjct: 144 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDY 175
Score = 31.9 bits (69), Expect = 0.53
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 352 DECRDASGLFYI-LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITE 507
DE + G+ + P + G + NWD + +W F E V + P+++TE
Sbjct: 43 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTE 94
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 44.8 bits (101), Expect = 7e-05
Identities = 30/92 (32%), Positives = 45/92 (48%)
Frame = +3
Query: 486 HPADHNRALFNFASIQEAMTEIFFEEYECQSLLRINATDLAEYNYRRTHKNDCTVVVDSG 665
HP A N + +E MT+I FE + ++ L+ Y RT VV+DSG
Sbjct: 102 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT----TGVVLDSG 157
Query: 666 YSFTYIVPYINGKKYKDAIIRIDVGGKVLTNH 761
T+ VP G AI+R+D+ G+ LT++
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDY 189
Score = 31.9 bits (69), Expect = 0.53
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 352 DECRDASGLFYI-LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITE 507
DE + G+ + P + G + NWD + +W F E V + P+++TE
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTE 108
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 44.4 bits (100), Expect = 9e-05
Identities = 29/92 (31%), Positives = 45/92 (48%)
Frame = +3
Query: 486 HPADHNRALFNFASIQEAMTEIFFEEYECQSLLRINATDLAEYNYRRTHKNDCTVVVDSG 665
HP A N + +E MT+I FE + ++ L+ Y RT +V+DSG
Sbjct: 102 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT----TGIVLDSG 157
Query: 666 YSFTYIVPYINGKKYKDAIIRIDVGGKVLTNH 761
T+ VP G AI+R+D+ G+ LT++
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDY 189
Score = 31.9 bits (69), Expect = 0.53
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 352 DECRDASGLFYI-LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITE 507
DE + G+ + P + G + NWD + +W F E V + P+++TE
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTE 108
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 44.4 bits (100), Expect = 9e-05
Identities = 29/92 (31%), Positives = 45/92 (48%)
Frame = +3
Query: 486 HPADHNRALFNFASIQEAMTEIFFEEYECQSLLRINATDLAEYNYRRTHKNDCTVVVDSG 665
HP A N + +E MT+I FE + ++ L+ Y RT +V+DSG
Sbjct: 102 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT----TGIVLDSG 157
Query: 666 YSFTYIVPYINGKKYKDAIIRIDVGGKVLTNH 761
T+ VP G AI+R+D+ G+ LT++
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDY 189
Score = 31.9 bits (69), Expect = 0.53
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 352 DECRDASGLFYI-LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITE 507
DE + G+ + P + G + NWD + +W F E V + P+++TE
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTE 108
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 42.7 bits (96), Expect = 3e-04
Identities = 31/92 (33%), Positives = 43/92 (46%)
Frame = +3
Query: 486 HPADHNRALFNFASIQEAMTEIFFEEYECQSLLRINATDLAEYNYRRTHKNDCTVVVDSG 665
HP A N +E EIFFE + +L L+ Y RT VV+DSG
Sbjct: 105 HPVLLTDAPLNPLKNRERSAEIFFETFNVPALYIQMQAVLSLYATGRT----TGVVLDSG 160
Query: 666 YSFTYIVPYINGKKYKDAIIRIDVGGKVLTNH 761
T+ VP + G K AI R+D+ G+ +T +
Sbjct: 161 DGVTHAVPIVKGFAMKHAIQRMDLAGRDVTEY 192
Score = 36.3 bits (80), Expect = 0.025
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +1
Query: 334 FIGSQLDECRDASGLFYI-LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITE 507
FIG + + R GLF I P + G + NW + +W++IF ++ + + P+++T+
Sbjct: 56 FIGPKAESNR---GLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTD 111
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 41.9 bits (94), Expect = 5e-04
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Frame = +3
Query: 486 HPADHNRALFNFASIQEAMTEIFFEEYECQSL-LRINATDLAEYNYRRTHKNDCTVVVDS 662
HP A N S +E MT+I FE + ++ + I A L+ Y RT +V+D+
Sbjct: 101 HPVLLTEAPLNPKSNREKMTQIMFETFNTPAMYVNIQAV-LSLYASGRT----TGIVLDT 155
Query: 663 GYSFTYIVPYINGKKYKDAIIRIDVGGKVLTNH 761
G T+ VP G AI R+D+ G+ LT++
Sbjct: 156 GDGVTHTVPIYEGYALPHAIQRLDLAGRDLTDY 188
Score = 31.5 bits (68), Expect = 0.71
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 352 DECRDASGLFYI-LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITE 507
DE + G+ + P + G + NWD + +W F E + + P+++TE
Sbjct: 56 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRIAPEEHPVLLTE 107
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 35.1 bits (77), Expect = 0.057
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +1
Query: 337 IGSQLDECRDASGLFYILPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITE 507
+G + + R + Y P G + NWD VWD F E ++ + L++TE
Sbjct: 57 VGEECSQLRQMLDINY--PMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTE 111
Score = 31.1 bits (67), Expect = 0.93
Identities = 23/79 (29%), Positives = 34/79 (43%)
Frame = +3
Query: 525 SIQEAMTEIFFEEYECQSLLRINATDLAEYNYRRTHKNDCTVVVDSGYSFTYIVPYINGK 704
S +E M ++ FE+Y S+ L Y VVVDSG T+I P G
Sbjct: 118 SNREKMFQVMFEQYGFNSIYVAVQAVLTLYAQGLL----TGVVVDSGDGVTHICPVYEGF 173
Query: 705 KYKDAIIRIDVGGKVLTNH 761
R+D+ G+ +T +
Sbjct: 174 ALHHLTRRLDIAGRDITKY 192
>Z92830-1|CAB07354.1| 342|Caenorhabditis elegans Hypothetical
protein F11A5.1 protein.
Length = 342
Score = 32.3 bits (70), Expect = 0.40
Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -2
Query: 722 NRVFIFFAIYVW-NYVSKTITGVNYNCAVIFMSPTII 615
NR F+ FA + W + + +NY A+++ PT++
Sbjct: 128 NRYFLLFAEHTWWRFARRPFLAINYTLAILYYVPTVL 164
>Z83239-4|CAB05808.1| 336|Caenorhabditis elegans Hypothetical
protein T09F5.8 protein.
Length = 336
Score = 31.5 bits (68), Expect = 0.71
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -2
Query: 722 NRVFIFFAIYVW-NYVSKTITGVNYNCAVIFMSPTII 615
NR +I FA Y W Y +NY+ A+++ PT+I
Sbjct: 115 NRFYILFAEYTWWRYGRIVFYIINYSLALLYFVPTVI 151
>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
protein Y26D4A.9 protein.
Length = 1435
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Frame = +1
Query: 76 YLKLPK*ITFPFCTSLQ*YFRPNSR---RCTSN--LISNHR*PLNKRYENERDLLLYIGQ 240
Y + K I C ++ Y R N+R +C + + N+ + K YE E LLY+
Sbjct: 966 YNFIEKGIRGGICNAMLRYSRANNRHLKKCNTEEESLKNYEEEILKNYEEESIYLLYLDA 1025
Query: 241 RSLYG 255
+LYG
Sbjct: 1026 NNLYG 1030
>Z83116-3|CAB05561.1| 284|Caenorhabditis elegans Hypothetical
protein M01B2.3 protein.
Length = 284
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -2
Query: 710 IFFAIYVWNYVSKTITGVNYNCA--VIFMSPTIIVFSQICSIY 588
+FF +VW YVSKT T + A + + I++F I + Y
Sbjct: 190 LFFRFFVWKYVSKTQTNERISRATRIALLDFFIMIFFNILASY 232
>Z71186-8|CAA94917.2| 1322|Caenorhabditis elegans Hypothetical
protein F23D12.2 protein.
Length = 1322
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +3
Query: 447 HIQQRMLPSQLQ*HPADHNRALFNFASIQEAMTEIFFEEYECQSL 581
++ RMLP+Q+Q A N+ FA+ + E E+ EC L
Sbjct: 437 NLLSRMLPTQVQSTTASLNKKTGTFAAYENQAQEYKSEQAECSKL 481
>Z93383-8|CAB07629.1| 286|Caenorhabditis elegans Hypothetical
protein F54B8.9 protein.
Length = 286
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -2
Query: 716 VFIFFAIYVWNYVSKTITGVNYNCAV-IFMSPTIIVF 609
V +FF ++VW+Y +KT T + A I + +II+F
Sbjct: 188 VILFFRLFVWSYFAKTQTSQLISRATQIALLDSIIIF 224
>U23171-3|AAC46706.1| 1020|Caenorhabditis elegans Hypothetical
protein K02A2.3 protein.
Length = 1020
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1
Query: 409 LVNWDTQKTVWDFI-FSKECCPVNFNDTPLIITERFLTLPQYKRR 540
L+NW +K + + F++E ND LI+T+ P+Y R
Sbjct: 729 LLNWPNEKNPDELVLFAEEIIHGAANDNCLIVTKGITDFPEYSER 773
>AC006632-2|AAK85468.1| 478|Caenorhabditis elegans Hypothetical
protein F28A10.2 protein.
Length = 478
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 513 FNFASIQEAMTEIFFEEYECQSLLRINATDLAEYNYRRTHK 635
F+F I E++ F EC++ + AT+L EY Y K
Sbjct: 379 FSFTKIHESLETSNFTS-ECETYKMLKATNLIEYGYSGERK 418
>Z92830-2|CAB07355.2| 330|Caenorhabditis elegans Hypothetical
protein F11A5.2 protein.
Length = 330
Score = 27.9 bits (59), Expect = 8.7
Identities = 10/37 (27%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -2
Query: 722 NRVFIFFAIYVW-NYVSKTITGVNYNCAVIFMSPTII 615
NR F+ FA + W + + +NY +++ PT++
Sbjct: 116 NRFFLLFAEHSWWRFARRPFLAINYILGLLYYVPTVL 152
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,442,769
Number of Sequences: 27780
Number of extensions: 364816
Number of successful extensions: 872
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 860
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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