Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1406
(786 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 54 8e-08
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 47 2e-05
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 45 5e-05
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 45 5e-05
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 44 9e-05
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 43 3e-04
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 43 3e-04
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 43 3e-04
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 43 3e-04
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 42 5e-04
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 42 5e-04
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 42 5e-04
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 42 5e-04
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 37 0.017
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 35 0.070
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 35 0.070
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 34 0.12
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 31 0.87
At2g34380.1 68415.m04209 expressed protein 29 2.6
At5g47480.1 68418.m05863 expressed protein 29 3.5
At1g77480.2 68414.m09023 nucellin protein, putative similar to n... 29 4.6
At1g77480.1 68414.m09022 nucellin protein, putative similar to n... 29 4.6
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 54.4 bits (125), Expect = 8e-08
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Frame = +3
Query: 507 ALFNFASIQEAMTEIFFEEYECQSLLRINATDLAE-YNYRRT-----HKNDCTVVVDSGY 668
A + S+Q E+ FE++ SL + L Y R K C++VVD G+
Sbjct: 102 APLSIPSVQRTTDELVFEDFGFSSLYIAHPQSLVHLYEASRQPDSILSKTQCSLVVDCGF 161
Query: 669 SFTYIVPYINGKKYKDAIIRIDVGGKVLTNH*K 767
SFT+ VP ++ AI RID+GGK TN+ K
Sbjct: 162 SFTHAVPVLHNFTLNHAIKRIDLGGKAFTNYLK 194
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/94 (25%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Frame = +1
Query: 262 GFSNSKSRIIPNCIMKAKSERR--RPFIGSQLDECRDASGLFYILPFQKGFLVNWDTQKT 435
G + +IPNC+ K S ++ P + L + D + P +G+L+N D Q+
Sbjct: 19 GGERDPTTVIPNCLYKPLSSKKFIHPSPLTTLSDEIDLTSAAVRRPIDRGYLINSDLQRE 78
Query: 436 VWDFIFSKECCPVNFNDTPLIITERFLTLPQYKR 537
+W +F+ + + + L++TE L++P +R
Sbjct: 79 IWSHLFT-SLLHIAPSSSSLLLTEAPLSIPSVQR 111
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 46.8 bits (106), Expect = 2e-05
Identities = 31/92 (33%), Positives = 45/92 (48%)
Frame = +3
Query: 486 HPADHNRALFNFASIQEAMTEIFFEEYECQSLLRINATDLAEYNYRRTHKNDCTVVVDSG 665
HP A N + +E MT+I FE + S+ L+ + RT V+DSG
Sbjct: 58 HPVLLTEAPLNPKADREKMTQIMFETFAVPSMYIGMQAALSLHASGRT----TGTVLDSG 113
Query: 666 YSFTYIVPYINGKKYKDAIIRIDVGGKVLTNH 761
+YIVP G AI+R+D+ G+ LTN+
Sbjct: 114 DGVSYIVPIYEGSALPHAILRLDLAGRHLTNY 145
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 352 DECRDASGLFYI-LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITE 507
D+ SG+ + P + G + NWD + +W F E V + P+++TE
Sbjct: 13 DDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSE-LRVAPEEHPVLLTE 64
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 45.2 bits (102), Expect = 5e-05
Identities = 29/92 (31%), Positives = 45/92 (48%)
Frame = +3
Query: 486 HPADHNRALFNFASIQEAMTEIFFEEYECQSLLRINATDLAEYNYRRTHKNDCTVVVDSG 665
HP A N + +E MT+I FE + ++ L+ Y RT +V+DSG
Sbjct: 103 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT----TGIVLDSG 158
Query: 666 YSFTYIVPYINGKKYKDAIIRIDVGGKVLTNH 761
++ VP G AI+R+D+ G+ LT+H
Sbjct: 159 DGVSHTVPIYEGYALPHAILRLDLAGRDLTDH 190
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 352 DECRDASGLFYI-LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITE 507
DE + G+ + P + G + NWD + +W F E V + P+++TE
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTE 109
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 45.2 bits (102), Expect = 5e-05
Identities = 29/92 (31%), Positives = 45/92 (48%)
Frame = +3
Query: 486 HPADHNRALFNFASIQEAMTEIFFEEYECQSLLRINATDLAEYNYRRTHKNDCTVVVDSG 665
HP A N + +E MT+I FE + ++ L+ Y RT +V+DSG
Sbjct: 103 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT----TGIVLDSG 158
Query: 666 YSFTYIVPYINGKKYKDAIIRIDVGGKVLTNH 761
++ VP G AI+R+D+ G+ LT+H
Sbjct: 159 DGVSHTVPIYEGYALPHAILRLDLAGRDLTDH 190
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 352 DECRDASGLFYI-LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITE 507
DE + G+ + P + G + NWD + +W F E V + P+++TE
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTE 109
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 44.4 bits (100), Expect = 9e-05
Identities = 28/92 (30%), Positives = 47/92 (51%)
Frame = +3
Query: 486 HPADHNRALFNFASIQEAMTEIFFEEYECQSLLRINATDLAEYNYRRTHKNDCTVVVDSG 665
HP A +N + +E MT+I FE ++ ++ + L Y+ RT VV+D G
Sbjct: 92 HPVLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRT----TGVVLDLG 147
Query: 666 YSFTYIVPYINGKKYKDAIIRIDVGGKVLTNH 761
++ VP G I+R+D+GG+ LT++
Sbjct: 148 ERVSHTVPVYEGYALPHGILRLDLGGRDLTDY 179
Score = 31.5 bits (68), Expect = 0.66
Identities = 20/88 (22%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Frame = +1
Query: 256 KVGFSNSKS-RIIPNCIMKAKSERRRP---FIGSQLDECRDASGLFYILPFQKGFLVNWD 423
+ GF+ ++ +++ C++ + P ++G + RD L P + G + NWD
Sbjct: 14 QAGFAGDEAPKVVFPCVVGRPRDGLNPNESYVGEEGHANRDILTLKD--PMEHGIVNNWD 71
Query: 424 TQKTVWDFIFSKECCPVNFNDTPLIITE 507
+ +W + F E V+ + P+++TE
Sbjct: 72 DMEKIWHYTFYNE-LRVDPEEHPVLLTE 98
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 42.7 bits (96), Expect = 3e-04
Identities = 28/92 (30%), Positives = 45/92 (48%)
Frame = +3
Query: 486 HPADHNRALFNFASIQEAMTEIFFEEYECQSLLRINATDLAEYNYRRTHKNDCTVVVDSG 665
HP A N + +E MT+I FE + ++ L+ Y RT +V+DSG
Sbjct: 103 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRT----TGIVLDSG 158
Query: 666 YSFTYIVPYINGKKYKDAIIRIDVGGKVLTNH 761
++ VP G AI+R+D+ G+ LT++
Sbjct: 159 DGVSHTVPIYEGFSLPHAILRLDLAGRDLTDY 190
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 352 DECRDASGLFYI-LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITE 507
DE + G+ + P + G + NWD + +W F E + + P+++TE
Sbjct: 58 DEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNE-LRIAPEEHPVLLTE 109
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 42.7 bits (96), Expect = 3e-04
Identities = 28/92 (30%), Positives = 45/92 (48%)
Frame = +3
Query: 486 HPADHNRALFNFASIQEAMTEIFFEEYECQSLLRINATDLAEYNYRRTHKNDCTVVVDSG 665
HP A N + +E MT+I FE + ++ L+ Y RT +V+DSG
Sbjct: 103 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRT----TGIVLDSG 158
Query: 666 YSFTYIVPYINGKKYKDAIIRIDVGGKVLTNH 761
++ VP G AI+R+D+ G+ LT++
Sbjct: 159 DGVSHTVPIYEGFSLPHAILRLDLAGRDLTDY 190
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 352 DECRDASGLFYI-LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITE 507
DE + G+ + P + G + NWD + +W F E + + P+++TE
Sbjct: 58 DEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNE-LRIAPEEHPVLLTE 109
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 42.7 bits (96), Expect = 3e-04
Identities = 28/92 (30%), Positives = 45/92 (48%)
Frame = +3
Query: 486 HPADHNRALFNFASIQEAMTEIFFEEYECQSLLRINATDLAEYNYRRTHKNDCTVVVDSG 665
HP A N + +E MT+I FE + ++ L+ Y RT +V+DSG
Sbjct: 103 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT----TGIVLDSG 158
Query: 666 YSFTYIVPYINGKKYKDAIIRIDVGGKVLTNH 761
++ VP G AI+R+D+ G+ LT++
Sbjct: 159 DGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 190
Score = 31.1 bits (67), Expect = 0.87
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 352 DECRDASGLFYI-LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITE 507
DE + G+ + P + G + NWD + +W F E V + P+++TE
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTE 109
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 42.7 bits (96), Expect = 3e-04
Identities = 28/92 (30%), Positives = 45/92 (48%)
Frame = +3
Query: 486 HPADHNRALFNFASIQEAMTEIFFEEYECQSLLRINATDLAEYNYRRTHKNDCTVVVDSG 665
HP A N + +E MT+I FE + ++ L+ Y RT +V+DSG
Sbjct: 103 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRT----TGIVLDSG 158
Query: 666 YSFTYIVPYINGKKYKDAIIRIDVGGKVLTNH 761
++ VP G AI+R+D+ G+ LT++
Sbjct: 159 DGVSHTVPIYEGFSLPHAILRLDLAGRDLTDY 190
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 352 DECRDASGLFYI-LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITE 507
DE + G+ + P + G + NWD + +W F E + + P+++TE
Sbjct: 58 DEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNE-LRIAPEEHPVLLTE 109
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 41.9 bits (94), Expect = 5e-04
Identities = 28/91 (30%), Positives = 44/91 (48%)
Frame = +3
Query: 486 HPADHNRALFNFASIQEAMTEIFFEEYECQSLLRINATDLAEYNYRRTHKNDCTVVVDSG 665
HP A N + +E MT+I FE + ++ L+ Y RT +V+DSG
Sbjct: 103 HPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRT----TGIVLDSG 158
Query: 666 YSFTYIVPYINGKKYKDAIIRIDVGGKVLTN 758
++ VP G AI+R+D+ G+ LT+
Sbjct: 159 DGVSHTVPIYEGYALPHAILRLDLAGRDLTD 189
Score = 31.1 bits (67), Expect = 0.87
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 352 DECRDASGLFYI-LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITE 507
DE + G+ + P + G + NWD + +W F E V + P+++TE
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTE 109
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 41.9 bits (94), Expect = 5e-04
Identities = 28/91 (30%), Positives = 44/91 (48%)
Frame = +3
Query: 486 HPADHNRALFNFASIQEAMTEIFFEEYECQSLLRINATDLAEYNYRRTHKNDCTVVVDSG 665
HP A N + +E MT+I FE + ++ L+ Y RT +V+DSG
Sbjct: 103 HPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRT----TGIVLDSG 158
Query: 666 YSFTYIVPYINGKKYKDAIIRIDVGGKVLTN 758
++ VP G AI+R+D+ G+ LT+
Sbjct: 159 DGVSHTVPIYEGYALPHAILRLDLAGRDLTD 189
Score = 31.5 bits (68), Expect = 0.66
Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +1
Query: 352 DECRDASGLFYI-LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITERFLTLPQ 528
DE + G+ + P + G + NWD + +W F E V + P+++TE L
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNE-LRVAPEEHPILLTEAPLNPKA 116
Query: 529 YKRR*RKYSSKNTNASRCY 585
+ + + + NA Y
Sbjct: 117 NREKMTQIMFETFNAPAMY 135
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 41.9 bits (94), Expect = 5e-04
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Frame = +3
Query: 486 HPADHNRALFNFASIQEAMTEIFFEEYECQSL-LRINATDLAEYNYRRTHKNDCTVVVDS 662
HP A N +E MT+I FE + S+ + I A L+ Y+ RT +V+DS
Sbjct: 104 HPILLTEAPLNPKVNREKMTQIMFESFAFPSMYIGIQAV-LSLYSSGRT----TGIVLDS 158
Query: 663 GYSFTYIVPYINGKKYKDAIIRIDVGGKVLTNH 761
G ++ VP G AI+R+D+ G+ LT +
Sbjct: 159 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTEY 191
Score = 31.9 bits (69), Expect = 0.50
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = +1
Query: 319 ERRRPFIGSQLDECRDASGLFYILPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLI 498
+ + F+G + R L Y P + G + NWD + +W F E + + P++
Sbjct: 51 DEKDTFVGDEAQARRGILSLKY--PIEHGVVSNWDDMEKIWHHTFYNE-LRLEPEEHPIL 107
Query: 499 ITE 507
+TE
Sbjct: 108 LTE 110
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 41.9 bits (94), Expect = 5e-04
Identities = 28/91 (30%), Positives = 44/91 (48%)
Frame = +3
Query: 486 HPADHNRALFNFASIQEAMTEIFFEEYECQSLLRINATDLAEYNYRRTHKNDCTVVVDSG 665
HP A N + +E MT+I FE + ++ L+ Y RT +V+DSG
Sbjct: 103 HPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRT----TGIVLDSG 158
Query: 666 YSFTYIVPYINGKKYKDAIIRIDVGGKVLTN 758
++ VP G AI+R+D+ G+ LT+
Sbjct: 159 DGVSHTVPIYEGYALPHAILRLDLAGRDLTD 189
Score = 31.5 bits (68), Expect = 0.66
Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +1
Query: 352 DECRDASGLFYI-LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITERFLTLPQ 528
DE + G+ + P + G + NWD + +W F E V + P+++TE L
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNE-LRVAPEEHPILLTEAPLNPKA 116
Query: 529 YKRR*RKYSSKNTNASRCY 585
+ + + + NA Y
Sbjct: 117 NREKMTQIMFETFNAPAMY 135
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 36.7 bits (81), Expect = 0.017
Identities = 23/91 (25%), Positives = 43/91 (47%)
Frame = +1
Query: 268 SNSKSRIIPNCIMKAKSERRRPFIGSQLDECRDASGLFYILPFQKGFLVNWDTQKTVWDF 447
+NS S K KS+R+ ++GSQ R + + P + G + +WD +W+
Sbjct: 55 TNSNSEDSKTESEKEKSKRKL-YVGSQAMSYR-RDHMEVLSPIKDGIVSDWDLVDNIWEH 112
Query: 448 IFSKECCPVNFNDTPLIITERFLTLPQYKRR 540
F K C ++ + P+++ E L Q + +
Sbjct: 113 AF-KSCLMIDPTEHPMLLAEPPLNTQQQREK 142
Score = 33.1 bits (72), Expect = 0.21
Identities = 28/108 (25%), Positives = 46/108 (42%), Gaps = 4/108 (3%)
Frame = +3
Query: 447 HIQQRMLPSQLQ*HPADHNRAL----FNFASIQEAMTEIFFEEYECQSLLRINATDLAEY 614
+I + S L P +H L N +E E+ FE+Y+ +L L +
Sbjct: 108 NIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAAELMFEKYKVPALFMAKNPVLTSF 167
Query: 615 NYRRTHKNDCTVVVDSGYSFTYIVPYINGKKYKDAIIRIDVGGKVLTN 758
R ++VVD G T I P +G + A++ +GG+ LT+
Sbjct: 168 ATGRA----TSLVVDCGGGSTTISPVHDGYVLQKAVVSSPLGGEFLTD 211
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 34.7 bits (76), Expect = 0.070
Identities = 23/98 (23%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Frame = +3
Query: 486 HPADHNRALFNFASIQEAMTEIFFEEYECQSLLRINATDLAEYNYRRTH---KNDCTVVV 656
HP N + M E+ FE Y ++ Y Y + H K D +V+
Sbjct: 117 HPILITECACNPVQSRSKMAELLFETYGVPAVA-FGVDAAFSYKYNQLHGICKKD-GIVL 174
Query: 657 DSGYSFTYIVPYINGKKYKDAIIRIDVGGKVLTNH*KR 770
G++ T+ +P+++G+ R ++GG +T++ K+
Sbjct: 175 CPGFTTTHSIPFVDGEPIYKGSSRTNIGGYHVTDYLKQ 212
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 34.7 bits (76), Expect = 0.070
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +1
Query: 322 RRRPFIGSQ-LDECRDASGLFYILPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLI 498
+R+ + GSQ L+ RD + + P + G + +WD VWD F + C ++ + P++
Sbjct: 66 KRKLYTGSQALNFRRDQMEI--LSPTKDGIVTDWDMVDNVWDHAF-RNCLMIDPTEHPML 122
Query: 499 ITERFLTLPQYKRR 540
+ E L Q + +
Sbjct: 123 LAEPPLNSQQQREK 136
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +1
Query: 337 IGSQLDECRDASGLFYILPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITE 507
+G E R + Y P G + NWD + VWD F E +N +D +++T+
Sbjct: 55 VGETCSELRHQLDINY--PVHNGIVQNWDDMEHVWDHAFYNE-LKINPSDCKILLTD 108
Score = 32.3 bits (70), Expect = 0.38
Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Frame = +3
Query: 447 HIQQRMLPSQLQ*HPADHNRAL----FNFASIQEAMTEIFFEEYECQSL-LRINATDLAE 611
H+ ++L+ +P+D L N + +E M E FE+Y + ++I A L
Sbjct: 85 HVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMFEKYNFAGVFIQIQAV-LTL 143
Query: 612 YNYRRTHKNDCTVVVDSGYSFTYIVPYINGKKYKDAIIRIDVGGKVLT 755
Y +V+DSG T++VP ++G + R++V G+ +T
Sbjct: 144 YAQGLL----TGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHIT 187
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 31.1 bits (67), Expect = 0.87
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +3
Query: 531 QEAMTEIFFEEYECQSL-LRINATDLAEYNYRRTHKNDCTVVVDSGYSFTYIVPYINGKK 707
+E EI FE + L + +N+ Y + VVVD G T++VP G
Sbjct: 135 REYTGEILFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGATHVVPVAEGYV 194
Query: 708 YKDAIIRIDVGGKVLT 755
I I + GK +T
Sbjct: 195 IGSCIKSIPIAGKDVT 210
>At2g34380.1 68415.m04209 expressed protein
Length = 509
Score = 29.5 bits (63), Expect = 2.6
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +1
Query: 286 IIPNCIMKAKSERRRPFI-GSQLDECRDASGLFYI--LPFQKGFLVNWDTQKTVW 441
IIP +K E+R F G+ + E DAS LF LPF K + NW VW
Sbjct: 405 IIPTACLKIMIEQRAEFRPGAGIPEIYDAS-LFLESKLPFLKRIIWNWRKTLFVW 458
>At5g47480.1 68418.m05863 expressed protein
Length = 1350
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1
Query: 504 GYDQRGVIEVDWAAFFAEYEVPDG 433
G GV EVDW +F+A+ V DG
Sbjct: 137 GSGSPGVKEVDWGSFYADSSVNDG 160
>At1g77480.2 68414.m09023 nucellin protein, putative similar to
nucellin GB:AAB96882 GI:2290202 [Hordeum vulgare]
(nucellin: similar to aspartic protease and its specific
expression in nucellar cells during degeneration)
Length = 432
Score = 28.7 bits (61), Expect = 4.6
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +3
Query: 612 YNYRRTHKNDCTVVVDSGYSFTYIVPYINGKKYKDA--IIRIDVGGKVLTN 758
+N + T VV DSG S+T Y N + Y+ +IR D+ GK LT+
Sbjct: 270 FNDKTTGVKGINVVFDSGSSYT----YFNAEAYQAILDLIRKDLNGKPLTD 316
>At1g77480.1 68414.m09022 nucellin protein, putative similar to
nucellin GB:AAB96882 GI:2290202 [Hordeum vulgare]
(nucellin: similar to aspartic protease and its specific
expression in nucellar cells during degeneration)
Length = 466
Score = 28.7 bits (61), Expect = 4.6
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +3
Query: 612 YNYRRTHKNDCTVVVDSGYSFTYIVPYINGKKYKDA--IIRIDVGGKVLTN 758
+N + T VV DSG S+T Y N + Y+ +IR D+ GK LT+
Sbjct: 270 FNDKTTGVKGINVVFDSGSSYT----YFNAEAYQAILDLIRKDLNGKPLTD 316
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,258,259
Number of Sequences: 28952
Number of extensions: 332448
Number of successful extensions: 722
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1765546400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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