Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1405X
         (488 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   1.5  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   1.5  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   2.0  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    23   2.0  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   2.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.0  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   3.4  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   3.4  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    22   3.4  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   4.5  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   4.5  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   7.9  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   7.9  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   7.9  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 3   FTYIPTYLPCTYLITYYN 56
           FTY+P  L C Y    Y+
Sbjct: 327 FTYVPMILYCVYTTATYD 344


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 3   FTYIPTYLPCTYLITYYN 56
           FTY+P  L C Y    Y+
Sbjct: 52  FTYVPMILYCVYTTATYD 69


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 175 TPQPVVTNTEHTDEQLVNQVQTDV 246
           TP   +    HT E L+  +QTD+
Sbjct: 120 TPNGKIVFVSHTVEHLLGHLQTDL 143


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +3

Query: 312 IPGIHDLSPEEMRLFIYESKRNNTLEQAIAYIN 410
           + G  D  PE + L +   K+N TL  A   I+
Sbjct: 160 LDGDIDFQPEALHLLVDYMKKNKTLGAACGRIH 192


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +3

Query: 312 IPGIHDLSPEEMRLFIYESKRNNTLEQAIAYIN 410
           + G  D  PE + L +   K+N TL  A   I+
Sbjct: 474 LDGDIDFQPEALHLLVDYMKKNKTLGAACGRIH 506


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +3

Query: 312 IPGIHDLSPEEMRLFIYESKRNNTLEQAIAYIN 410
           + G  D  PE + L +   K+N TL  A   I+
Sbjct: 707 LDGDIDFQPEALHLLVDYMKKNKTLGAACGRIH 739


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +3

Query: 312 IPGIHDLSPEEMRLFIYESKRNNTLEQAIAYIN 410
           + G  D  PE + L +   K+N TL  A   I+
Sbjct: 707 LDGDIDFQPEALHLLVDYMKKNKTLGAACGRIH 739


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 78  HNWIVLFNYNM*LGRYMVGR*VC 10
           HNW V++N  +  G   +G  VC
Sbjct: 500 HNWRVVYNNKIPTGDGALGGEVC 522


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 7/20 (35%), Positives = 16/20 (80%)
 Frame = +3

Query: 318 GIHDLSPEEMRLFIYESKRN 377
           G++ L+PE++ L + ++K+N
Sbjct: 79  GVNLLNPEDVELVLTDTKQN 98


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 7/20 (35%), Positives = 16/20 (80%)
 Frame = +3

Query: 318 GIHDLSPEEMRLFIYESKRN 377
           G++ L+PE++ L + ++K+N
Sbjct: 79  GVNLLNPEDVELVLTDTKQN 98


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 9/46 (19%), Positives = 20/46 (43%)
 Frame = +1

Query: 82  VCKFFQQGYCRYGQNCRFEHVYGSKYTYHATTPQPVVTNTEHTDEQ 219
           +C+F + G   +  + +  ++Y   +       Q V   TE+  E+
Sbjct: 297 ICEFHRNGTVVFLDDMKVPYMYEDTFWIGYDNEQSVTIKTEYAKEK 342


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +3

Query: 3   FTYIPTYLPCTYLITY 50
           F YI TYL  T  +TY
Sbjct: 136 FLYIFTYLSVTCYVTY 151


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -1

Query: 158 YLEP*TCSNLQFWP 117
           YL+   C +L+ WP
Sbjct: 330 YLDQVVCESLRLWP 343


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +3

Query: 12  IPTYLPCTYLITYYN*IKLSNYDC 83
           +P     T+L+ +Y+ +  + YDC
Sbjct: 53  VPMTCRYTFLLEWYHTLSKACYDC 76


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 5/10 (50%), Positives = 7/10 (70%)
 Frame = +1

Query: 109 CRYGQNCRFE 138
           C+YG NC  +
Sbjct: 224 CKYGNNCEID 233


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,999
Number of Sequences: 336
Number of extensions: 2516
Number of successful extensions: 25
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11420693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)