Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1405X
(488 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_02_0136 + 12195422-12195435,12196047-12196122,12196896-121977... 40 0.001
12_02_0008 + 12239759-12239923,12240404-12240443,12241278-122414... 38 0.006
02_05_1041 - 33713561-33714564,33714844-33714904,33715640-337159... 36 0.013
11_04_0274 - 15667178-15667444,15668352-15668678,15669430-156695... 35 0.030
02_05_0300 + 27681204-27681656,27681745-27681840,27681933-276820... 35 0.040
08_01_0244 + 2016548-2017101,2017392-2019681,2019785-2019817 33 0.093
06_03_0867 + 25534760-25539620,25540662-25540857,25540957-255411... 33 0.093
01_06_1254 + 35761046-35761162,35761332-35761416,35761877-357620... 33 0.093
06_03_1309 + 29223197-29223240,29223358-29223592,29223695-292237... 33 0.12
03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-69... 33 0.12
01_01_1096 - 8659091-8659459,8660730-8661050,8661416-8661694,866... 33 0.12
01_06_1805 - 39999987-40000169,40000648-40000974,40001724-400020... 33 0.16
10_07_0063 - 12502305-12503361,12503567-12503668,12504251-125043... 32 0.28
08_01_0181 + 1530623-1531626,1531723-1531902,1531998-1532177,153... 32 0.28
06_03_1121 + 27767707-27768065,27768612-27769034,27770013-277701... 31 0.38
02_02_0568 + 11577804-11578676,11578956-11579042,11579043-11579141 31 0.50
01_01_1092 - 8593414-8593776,8597750-8597931,8598080-8598152 31 0.50
01_05_0707 - 24468329-24468448,24468794-24468940,24469050-244691... 31 0.66
07_03_1709 - 28873172-28873327,28873519-28873584,28874067-288741... 30 0.87
03_02_0874 + 12017069-12018051,12018137-12018316,12018421-120186... 30 1.1
06_03_0253 + 18753901-18754278,18754873-18754968,18755167-187553... 29 1.5
06_03_0246 + 18672704-18673111,18674069-18674164,18674362-186745... 29 1.5
03_06_0523 + 34499533-34499705,34499808-34499917,34500037-345002... 29 1.5
03_02_0875 + 12038365-12039329,12039417-12039593,12039651-120398... 29 1.5
05_05_0351 - 24319356-24319385,24319470-24320902,24321011-243211... 29 2.6
03_02_0709 + 10583621-10583626,10583711-10584712,10585304-10585669 29 2.6
01_05_0420 + 21969797-21970939,21971307-21971369,21971488-219716... 29 2.6
07_03_1050 - 23570785-23570824,23570938-23571004,23571114-235711... 28 3.5
01_01_1089 - 8560008-8560220,8560456-8560977,8561095-8561283,856... 28 3.5
08_01_0395 - 3502750-3503033,3504844-3505663 28 4.6
02_05_1332 + 35758657-35758728,35758959-35760689 28 4.6
07_01_0281 - 2067696-2068862 27 6.1
06_03_0766 - 24425486-24426245,24430766-24430855,24430951-244310... 27 6.1
05_03_0188 + 9417186-9417306,9417418-9417604,9417669-9417801,941... 27 6.1
09_06_0048 + 20477076-20478547,20478643-20478722,20478880-204788... 27 8.1
02_01_0703 + 5251901-5251950,5252783-5253554 27 8.1
02_01_0278 - 1851338-1851412,1851579-1851819,1851946-1852047,185... 27 8.1
>06_02_0136 +
12195422-12195435,12196047-12196122,12196896-12197707,
12197941-12198010,12199469-12199557,12199633-12199666
Length = 364
Score = 39.5 bits (88), Expect = 0.001
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = +1
Query: 43 LHIIIE*NYPIMIVCKFFQQGYCRYGQNCRFEHVYGSKYTYHATTPQPVVT 195
LHI++ + VC F+Q+G C YG CR++HV S+ A P T
Sbjct: 21 LHILV---LRTLQVCTFYQKGSCSYGSRCRYDHVKVSRNPTVAPPPSSSTT 68
>12_02_0008 +
12239759-12239923,12240404-12240443,12241278-12241435,
12242400-12242462,12243149-12243268,12243388-12243684,
12245012-12245335,12246411-12246680
Length = 478
Score = 37.5 bits (83), Expect = 0.006
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +1
Query: 82 VCKFFQQ-GYCRYGQNCRFEHVYGSKYTYHATTPQPVVTNTEH 207
VC F+ + G C++G NC+F+H G+ AT+P+ V++ +
Sbjct: 393 VCTFYSRYGICKFGPNCKFDHPMGTLMYGSATSPRGDVSSMHY 435
Score = 27.5 bits (58), Expect = 6.1
Identities = 8/20 (40%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
Frame = +1
Query: 85 CKFFQQ-GYCRYGQNCRFEH 141
C ++ + G CR+G C+F H
Sbjct: 96 CSYYMRTGLCRFGMTCKFNH 115
>02_05_1041 -
33713561-33714564,33714844-33714904,33715640-33715951,
33716780-33716917
Length = 504
Score = 36.3 bits (80), Expect = 0.013
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1
Query: 76 MIVCKFFQQGYCRYGQNCRFEH 141
M +CKFF Q CR+G NCR H
Sbjct: 149 MSMCKFFLQQRCRFGSNCRLSH 170
>11_04_0274 -
15667178-15667444,15668352-15668678,15669430-15669563,
15669669-15669726,15669842-15669961,15670814-15670876,
15671388-15671539,15673002-15673116,15673907-15673981,
15674474-15674538,15675020-15675128
Length = 494
Score = 35.1 bits (77), Expect = 0.030
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +1
Query: 82 VCKFFQQ-GYCRYGQNCRFEHVYGSKYTYHATTP 180
+C F+ + G C++G NC+F+H G+ AT+P
Sbjct: 410 ICTFYSRYGICKFGPNCKFDHPMGTVMYGLATSP 443
Score = 27.5 bits (58), Expect = 6.1
Identities = 8/20 (40%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
Frame = +1
Query: 85 CKFFQQ-GYCRYGQNCRFEH 141
C ++ + G CR+G C+F H
Sbjct: 147 CSYYMRTGLCRFGMTCKFNH 166
>02_05_0300 +
27681204-27681656,27681745-27681840,27681933-27682022,
27682126-27682227,27682310-27682456,27683608-27683748,
27683749-27683808,27685133-27685230,27685308-27685410,
27685954-27686037
Length = 457
Score = 34.7 bits (76), Expect = 0.040
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 85 CKFFQQGYCRYGQNCRFEHVYGSKYTYHATTP 180
C++F G C YG+ CR+ H Y + TP
Sbjct: 114 CRYFLAGDCSYGEKCRYPHSYSMSDSITMLTP 145
>08_01_0244 + 2016548-2017101,2017392-2019681,2019785-2019817
Length = 958
Score = 33.5 bits (73), Expect = 0.093
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 85 CKFFQQGYCRYGQNCRFEHVYGSK 156
CKFF G CR GQNC + H S+
Sbjct: 379 CKFFANGGCRRGQNCPYLHEEASQ 402
Score = 31.5 bits (68), Expect = 0.38
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 85 CKFFQQGYCRYGQNCRFEHVYGSKYTYHATTP 180
C+ F G CR G NCRF H G + + P
Sbjct: 235 CRDFVAGRCRRGSNCRFPHEDGVRRQFDEHYP 266
>06_03_0867 + 25534760-25539620,25540662-25540857,25540957-25541104,
25541673-25541751,25542151-25542238,25542330-25542600,
25542676-25542718,25542801-25542904,25543374-25543790
Length = 2068
Score = 33.5 bits (73), Expect = 0.093
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 46 HIIIE*NYPIMIVCKFFQQGYCRYGQNCRFEHVY 147
H+ + N P VC+ F +GYC YG C +H Y
Sbjct: 1907 HVKVNLNAP---VCEDFLKGYCAYGDECHKKHSY 1937
>01_06_1254 +
35761046-35761162,35761332-35761416,35761877-35762017,
35762118-35762206,35762519-35762701,35763509-35763697,
35763808-35763938,35764023-35764125,35765123-35765308
Length = 407
Score = 33.5 bits (73), Expect = 0.093
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 70 PIMIVCKFFQQGYCRYGQNCRFEH 141
P IVC+FF+ G C+ G C+F H
Sbjct: 71 PKSIVCEFFKVGQCQKGFKCKFSH 94
>06_03_1309 +
29223197-29223240,29223358-29223592,29223695-29223783,
29223870-29223968,29224065-29224158,29224297-29224514,
29224861-29224967,29225298-29225472,29225596-29225743,
29226548-29226596,29228016-29228162,29229990-29229996,
29230417-29230482,29230773-29231991,29232073-29233149,
29233226-29233355,29233519-29233617,29233817-29233878,
29234429-29234533
Length = 1389
Score = 33.1 bits (72), Expect = 0.12
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 82 VCKFFQQGYCRYGQNCRFEH 141
+C+ FQ+G C+YG CR+ H
Sbjct: 7 ICRNFQRGSCKYGAQCRYLH 26
>03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-693320,
693391-693518,693951-694010,694113-694163,694704-694821,
694990-695915,695916-697707,697810-697943,698029-698526
Length = 1774
Score = 33.1 bits (72), Expect = 0.12
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 82 VCKFFQQGYCRYGQNCRFEH 141
+CKF + GYCR G +C + H
Sbjct: 1754 ICKFHENGYCRKGASCNYLH 1773
>01_01_1096 -
8659091-8659459,8660730-8661050,8661416-8661694,
8661781-8661897,8662142-8662210,8663204-8663397,
8663552-8663633
Length = 476
Score = 33.1 bits (72), Expect = 0.12
Identities = 11/24 (45%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Frame = +1
Query: 85 CKFF-QQGYCRYGQNCRFEHVYGS 153
C ++ Q GYCRYG C+++H G+
Sbjct: 359 CAYYAQNGYCRYGVACKYDHPMGT 382
Score = 28.3 bits (60), Expect = 3.5
Identities = 7/21 (33%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
Frame = +1
Query: 82 VCKFFQQ-GYCRYGQNCRFEH 141
+C+++ + G C++G NC++ H
Sbjct: 113 ICEYYMKTGTCKFGTNCKYHH 133
>01_06_1805 -
39999987-40000169,40000648-40000974,40001724-40002017,
40002112-40002231,40002714-40002776,40003150-40003310,
40003864-40004035
Length = 439
Score = 32.7 bits (71), Expect = 0.16
Identities = 10/21 (47%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Frame = +1
Query: 82 VCKFFQQ-GYCRYGQNCRFEH 141
+CKF+ + G C++G NC+F+H
Sbjct: 383 LCKFYSRYGICKFGANCKFDH 403
Score = 28.3 bits (60), Expect = 3.5
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 91 FFQQGYCRYGQNCRFEH 141
+ + G CR+G +CRF H
Sbjct: 89 YLRTGLCRFGMSCRFNH 105
Score = 27.1 bits (57), Expect = 8.1
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +1
Query: 91 FFQQGYCRYGQNCRFEH 141
+ + G C+YG C+F H
Sbjct: 180 YLKTGQCKYGNTCKFHH 196
>10_07_0063 -
12502305-12503361,12503567-12503668,12504251-12504378,
12504653-12504764,12504876-12504927,12505260-12505517,
12505943-12506079,12506296-12506606
Length = 718
Score = 31.9 bits (69), Expect = 0.28
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1
Query: 97 QQGYCRYGQNCRFEH 141
QQG+C YG+NC+F H
Sbjct: 701 QQGWCPYGENCKFMH 715
>08_01_0181 +
1530623-1531626,1531723-1531902,1531998-1532177,
1532363-1532442,1532528-1532701,1533001-1533118,
1533223-1533301
Length = 604
Score = 31.9 bits (69), Expect = 0.28
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 85 CKFFQQGYCRYGQNCRFEH 141
C +F +G C+ GQNC + H
Sbjct: 217 CHYFSKGICKNGQNCHYSH 235
>06_03_1121 +
27767707-27768065,27768612-27769034,27770013-27770175,
27770271-27770381,27770895-27770963,27771117-27771203,
27771967-27772752
Length = 665
Score = 31.5 bits (68), Expect = 0.38
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 85 CKFFQQGYCRYGQNCRFEHV 144
C ++ G+C G NCR++HV
Sbjct: 118 CNMYKMGFCPNGPNCRYKHV 137
>02_02_0568 + 11577804-11578676,11578956-11579042,11579043-11579141
Length = 352
Score = 31.1 bits (67), Expect = 0.50
Identities = 11/24 (45%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Frame = +1
Query: 82 VCKFFQQ-GYCRYGQNCRFEHVYG 150
+CK +++ GYC YG +C+F H G
Sbjct: 192 ICKDYKETGYCGYGDSCKFMHDRG 215
>01_01_1092 - 8593414-8593776,8597750-8597931,8598080-8598152
Length = 205
Score = 31.1 bits (67), Expect = 0.50
Identities = 9/24 (37%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Frame = +1
Query: 85 CKFF-QQGYCRYGQNCRFEHVYGS 153
C ++ Q G+C++G C+F+H G+
Sbjct: 90 CAYYTQHGFCKFGPTCKFDHPMGT 113
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +1
Query: 91 FFQQGYCRYGQNCRFEHVYGSKYTYHATTPQPVVTNTEH 207
+ + G C YG+NCR+ H A QP T+H
Sbjct: 60 YLRTGACGYGENCRYNHPRDRAAA--AVGSQPCAYYTQH 96
>01_05_0707 -
24468329-24468448,24468794-24468940,24469050-24469103,
24469185-24469300,24470537-24470583,24470686-24470723,
24471050-24471268,24471504-24471602,24471675-24471728,
24472907-24473148,24474258-24474447
Length = 441
Score = 30.7 bits (66), Expect = 0.66
Identities = 9/22 (40%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = +1
Query: 79 IVCKFFQQ-GYCRYGQNCRFEH 141
+VC F+ + G C++G C+F+H
Sbjct: 405 VVCAFYMKTGVCKFGMQCKFDH 426
Score = 28.3 bits (60), Expect = 3.5
Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +1
Query: 70 PIMIVCKFFQQ-GYCRYGQNCRFEH 141
P + C F+ + G C++G CRF H
Sbjct: 268 PGEVDCPFYMKMGSCKFGSTCRFNH 292
Score = 28.3 bits (60), Expect = 3.5
Identities = 9/25 (36%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +1
Query: 70 PIMIVCKFFQQ-GYCRYGQNCRFEH 141
P VC F+ + G+C++ C+F H
Sbjct: 347 PGATVCDFYMKTGFCKFADRCKFHH 371
Score = 27.9 bits (59), Expect = 4.6
Identities = 9/20 (45%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
Frame = +1
Query: 85 CKFFQQ-GYCRYGQNCRFEH 141
C FF + G C++G C+F H
Sbjct: 161 CPFFMKTGKCKFGSKCKFNH 180
>07_03_1709 -
28873172-28873327,28873519-28873584,28874067-28874127,
28875406-28875462,28876301-28876531,28876685-28876799,
28876897-28877136,28877222-28877316,28877406-28877585,
28877663-28877839,28877920-28878890
Length = 782
Score = 30.3 bits (65), Expect = 0.87
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 85 CKFFQQGYCRYGQNCRFEH 141
C ++ +GYC+ G CRF H
Sbjct: 235 CLYYARGYCKNGSACRFVH 253
>03_02_0874 +
12017069-12018051,12018137-12018316,12018421-12018600,
12018718-12018797,12018999-12019259,12019360-12019474,
12019631-12019855,12020840-12020849
Length = 677
Score = 29.9 bits (64), Expect = 1.1
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +1
Query: 85 CKFFQQGYCRYGQNCRFEH 141
C ++ +G+C+ G +CRF H
Sbjct: 239 CLYYARGFCKNGSSCRFVH 257
>06_03_0253 +
18753901-18754278,18754873-18754968,18755167-18755376,
18756028-18756093,18756379-18756576,18756616-18756810,
18756968-18757014,18757147-18757234,18757331-18757681,
18758593-18759123
Length = 719
Score = 29.5 bits (63), Expect = 1.5
Identities = 8/21 (38%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
Frame = +1
Query: 82 VCKFFQ-QGYCRYGQNCRFEH 141
+C ++ +G C++G NC+F+H
Sbjct: 162 LCSYYMNRGICKFGTNCKFDH 182
Score = 28.7 bits (61), Expect = 2.6
Identities = 9/20 (45%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +1
Query: 85 CKFFQQ-GYCRYGQNCRFEH 141
C ++ + G C++G NCRF H
Sbjct: 96 CSYYVKFGSCKFGMNCRFNH 115
>06_03_0246 +
18672704-18673111,18674069-18674164,18674362-18674571,
18675780-18675851,18675898-18675945
Length = 277
Score = 29.5 bits (63), Expect = 1.5
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 91 FFQQGYCRYGQNCRFEH 141
+ + G C+YG NCRF H
Sbjct: 110 YLRFGRCKYGMNCRFNH 126
Score = 29.1 bits (62), Expect = 2.0
Identities = 8/21 (38%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +1
Query: 82 VCKFFQ-QGYCRYGQNCRFEH 141
+C ++ +G C++G NC+F H
Sbjct: 172 LCSYYMNRGICKFGSNCKFHH 192
>03_06_0523 +
34499533-34499705,34499808-34499917,34500037-34500224,
34500984-34501451
Length = 312
Score = 29.5 bits (63), Expect = 1.5
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 82 VCKFFQQGYCRYGQNCRFEH 141
VC FQ+G C G +CR+ H
Sbjct: 135 VCYAFQKGECNRGASCRYSH 154
>03_02_0875 +
12038365-12039329,12039417-12039593,12039651-12039893,
12040045-12040124,12040242-12040508,12040599-12040710,
12040757-12041071,12041357-12041366
Length = 722
Score = 29.5 bits (63), Expect = 1.5
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +1
Query: 85 CKFFQQGYCRYGQNCRFEH 141
C ++ +G+C+ G CRF H
Sbjct: 234 CLYYARGFCKNGSTCRFVH 252
>05_05_0351 -
24319356-24319385,24319470-24320902,24321011-24321180,
24321302-24321485,24323094-24323264,24324002-24324125
Length = 703
Score = 28.7 bits (61), Expect = 2.6
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 85 CKFFQQGYCRYGQNCRFEH 141
C F+ QG C+ G++C F H
Sbjct: 182 CTFYAQGRCKNGKSCTFLH 200
>03_02_0709 + 10583621-10583626,10583711-10584712,10585304-10585669
Length = 457
Score = 28.7 bits (61), Expect = 2.6
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 82 VCKFFQQGYCRYGQNCRFEH 141
+C +++G C YG CRF H
Sbjct: 387 LCNKWERGACPYGARCRFAH 406
>01_05_0420 +
21969797-21970939,21971307-21971369,21971488-21971616,
21972241-21972291,21972669-21972809,21972922-21973122,
21973201-21973419,21973582-21973700,21973772-21973862,
21975864-21975965,21976291-21976315,21976522-21976592
Length = 784
Score = 28.7 bits (61), Expect = 2.6
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 73 IMIVCKFFQQGYCRYGQNCRFEH 141
++ VC F+ G C+ G C+F H
Sbjct: 431 VVKVCHFYLHGKCQQGNLCKFSH 453
Score = 28.7 bits (61), Expect = 2.6
Identities = 17/61 (27%), Positives = 25/61 (40%)
Frame = +1
Query: 91 FFQQGYCRYGQNCRFEHVYGSKYTYHATTPQPVVTNTEHTDEQLVNQVQTDVKSVYTEAN 270
F + G C G C+F HV + +TP +N E+ Q QT + T +
Sbjct: 492 FMENGMCIRGDKCKFSHVIPT--AEGPSTPDAKKSNASSVPEKANCQEQTSRQKTSTVYS 549
Query: 271 G 273
G
Sbjct: 550 G 550
>07_03_1050 -
23570785-23570824,23570938-23571004,23571114-23571196,
23572028-23572201,23572268-23572471,23572570-23573300
Length = 432
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/20 (55%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +1
Query: 85 CKF-FQQGYCRYGQNCRFEH 141
C F F +GYC+ G NC+F H
Sbjct: 138 CHFHFFRGYCKKGVNCQFFH 157
>01_01_1089 - 8560008-8560220,8560456-8560977,8561095-8561283,
8561377-8561642,8561967-8562111,8562411-8562530,
8562611-8562930,8564161-8564341,8564434-8564580,
8565186-8565497,8566303-8566450,8566592-8566765,
8567385-8567446,8567499-8567571,8567628-8567683,
8568370-8568645,8569541-8569588,8569870-8569991,
8570258-8570413,8571037-8571079,8572624-8572701,
8572972-8573070,8573168-8573209,8573302-8573304
Length = 1264
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Frame = +1
Query: 82 VCKFFQ--QGYCRYGQNCRFEHVYGS 153
+CKFF QG CR G +C F H GS
Sbjct: 1012 ICKFFLTLQG-CRNGNSCSFSHDSGS 1036
Score = 27.5 bits (58), Expect = 6.1
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +1
Query: 82 VCKFFQQGYCRYGQNCRFEH 141
+C FF G C G C F H
Sbjct: 985 MCVFFLNGSCNRGDTCHFSH 1004
>08_01_0395 - 3502750-3503033,3504844-3505663
Length = 367
Score = 27.9 bits (59), Expect = 4.6
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = +1
Query: 64 NYPIMIVCKFFQQGYCRYGQNCRFEHVYGSKYTY 165
N+ I K+ GYC +G C F H + Y
Sbjct: 245 NWKTRICNKWEMTGYCPFGSKCHFAHGAAELHKY 278
>02_05_1332 + 35758657-35758728,35758959-35760689
Length = 600
Score = 27.9 bits (59), Expect = 4.6
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Frame = +1
Query: 79 IVCKFFQQGYCRYGQNCRFEHV---YGSKYTYHAT 174
+ C +FQ+G C G C F H+ GS H T
Sbjct: 66 VPCYYFQKGMCVKGDRCAFLHLPQATGSPAPQHTT 100
>07_01_0281 - 2067696-2068862
Length = 388
Score = 27.5 bits (58), Expect = 6.1
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +1
Query: 100 QGYCRYGQNCRFEH 141
+G+CRYG NC++ H
Sbjct: 372 KGWCRYGLNCKYCH 385
>06_03_0766 -
24425486-24426245,24430766-24430855,24430951-24431070,
24431568-24431746,24432046-24432231,24432454-24432547,
24432679-24432743,24433652-24433987
Length = 609
Score = 27.5 bits (58), Expect = 6.1
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 82 VCKFFQQGYCRYGQNCRFEH 141
+C+ F +G C +G C F H
Sbjct: 578 LCENFNKGSCTFGDRCHFAH 597
>05_03_0188 +
9417186-9417306,9417418-9417604,9417669-9417801,
9418673-9418752,9421940-9422011,9422211-9422282,
9422361-9422432,9422720-9422791,9423038-9423109,
9423335-9423406,9423497-9423568,9423648-9423722,
9423824-9423895,9424072-9424137,9424223-9424299,
9424642-9425021,9425112-9425310,9425380-9425538,
9425620-9425738,9425942-9426092,9426257-9426488,
9426573-9426723,9426808-9427125
Length = 1007
Score = 27.5 bits (58), Expect = 6.1
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 351 LFIYESKRNNTLEQAIAYINNLTRETRQKYEQLL 452
L +YE N +L+QA+ NNL + ++E +L
Sbjct: 758 LLVYEYLENGSLDQALFRDNNLNLDWAMRFEIIL 791
>09_06_0048 + 20477076-20478547,20478643-20478722,20478880-20478893,
20480164-20481199,20481275-20481402,20481673-20481732,
20481774-20481878,20481971-20482055,20482315-20482470,
20482562-20482831,20482877-20483671,20483844-20483903,
20484062-20485134
Length = 1777
Score = 27.1 bits (57), Expect = 8.1
Identities = 9/21 (42%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = +1
Query: 82 VC-KFFQQGYCRYGQNCRFEH 141
VC +GYC+ G++C F H
Sbjct: 1683 VCYSILDKGYCKNGEHCNFSH 1703
>02_01_0703 + 5251901-5251950,5252783-5253554
Length = 273
Score = 27.1 bits (57), Expect = 8.1
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 82 VCKFFQQGYCRYGQNCRFEH 141
+C+ F +G C +G C F H
Sbjct: 243 LCENFTKGSCTFGDRCHFAH 262
>02_01_0278 -
1851338-1851412,1851579-1851819,1851946-1852047,
1852291-1852364,1852455-1852592,1852848-1853003,
1853364-1853513,1853808-1853867,1853946-1854073,
1854209-1854617,1855571-1855628,1856435-1856493,
1857478-1857606,1857765-1857774,1858134-1858183,
1858633-1858854
Length = 686
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 309 IIPGIHDLSPEEMRLFIYE 365
+I HDLSPE R F+Y+
Sbjct: 284 VIEANHDLSPEHHRFFLYQ 302
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,699,840
Number of Sequences: 37544
Number of extensions: 218729
Number of successful extensions: 616
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 616
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1011709100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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