Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1405X
         (488 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    29   0.11 
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    29   0.11 
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    25   1.4  
AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative acetyltr...    23   7.4  

>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 28.7 bits (61), Expect = 0.11
 Identities = 9/21 (42%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
 Frame = +1

Query: 82  VCKFFQQ-GYCRYGQNCRFEH 141
           +CK +++ GYC +G +C+F H
Sbjct: 180 ICKDYKETGYCGFGDSCKFLH 200


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 28.7 bits (61), Expect = 0.11
 Identities = 9/21 (42%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
 Frame = +1

Query: 82  VCKFFQQ-GYCRYGQNCRFEH 141
           +CK +++ GYC +G +C+F H
Sbjct: 180 ICKDYKETGYCGFGDSCKFLH 200


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +3

Query: 12  IPTYLPCTYLITYYN*IKLSNYDCLQVLPARLL 110
           IP ++  T+ I YY  +  +N   +QVL  +L+
Sbjct: 567 IPCFVVLTFFIYYYYAVSTANRHMVQVLKQQLV 599


>AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative
           acetyltransferase protein.
          Length = 471

 Score = 22.6 bits (46), Expect = 7.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -2

Query: 190 PPAVELLHDMCIWNRKHVQIYN 125
           PP  +L  D  IWN +++ +YN
Sbjct: 422 PPPEKLCVDQLIWNIRNI-VYN 442


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 496,843
Number of Sequences: 2352
Number of extensions: 9025
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43131618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)