Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1405X
(488 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U46674-4|AAA85756.1| 574|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z98866-11|CAB11564.2| 335|Caenorhabditis elegans Hypothetical p... 35 0.036
U62896-1|AAB17868.1| 335|Caenorhabditis elegans PIE-1 protein. 35 0.036
AL117204-10|CAB55125.1| 196|Caenorhabditis elegans Hypothetical... 34 0.048
AL117204-8|CAB55123.1| 205|Caenorhabditis elegans Hypothetical ... 34 0.064
AL117204-11|CAB55126.1| 201|Caenorhabditis elegans Hypothetical... 33 0.11
Z79695-4|CAB01969.3| 374|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z74476-2|CAA98962.1| 200|Caenorhabditis elegans Hypothetical pr... 31 0.34
AL110495-2|CAB60410.1| 203|Caenorhabditis elegans Hypothetical ... 31 0.45
Z74033-2|CAA98476.2| 419|Caenorhabditis elegans Hypothetical pr... 30 0.78
Z74033-1|CAA98475.2| 460|Caenorhabditis elegans Hypothetical pr... 30 0.78
Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical pr... 30 0.78
AC024826-3|AAP13746.1| 343|Caenorhabditis elegans Hypothetical ... 30 0.78
AC024826-2|AAF60798.1| 413|Caenorhabditis elegans Hypothetical ... 30 0.78
U41007-19|AAA82274.1| 432|Caenorhabditis elegans Hypothetical p... 29 1.4
Z82267-5|CAB05193.1| 203|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z82261-4|CAB05147.1| 203|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z82267-3|CAB05191.1| 186|Caenorhabditis elegans Hypothetical pr... 28 3.2
Z70271-7|CAJ80829.1| 559|Caenorhabditis elegans Hypothetical pr... 28 3.2
Z70271-6|CAA94232.1| 562|Caenorhabditis elegans Hypothetical pr... 28 3.2
U41109-13|AAB37036.1| 264|Caenorhabditis elegans Posterior segr... 28 3.2
AF039716-7|AAB96735.3| 617|Caenorhabditis elegans Sodium:neurot... 28 3.2
AB006208-1|BAA33854.1| 264|Caenorhabditis elegans cytoplasmic z... 28 3.2
Z92803-1|CAB07242.2| 384|Caenorhabditis elegans Hypothetical pr... 28 4.2
AF304126-1|AAG50239.1| 384|Caenorhabditis elegans RING and zinc... 28 4.2
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 28 4.2
Z99281-15|CAB16528.1| 199|Caenorhabditis elegans Hypothetical p... 27 5.5
Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical pr... 27 5.5
>U46674-4|AAA85756.1| 574|Caenorhabditis elegans Hypothetical
protein T26A8.4 protein.
Length = 574
Score = 38.7 bits (86), Expect = 0.002
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +1
Query: 82 VCKFFQQGYCRYGQNCRFEH 141
+CKFF++GYCR G NC + H
Sbjct: 170 ICKFFREGYCRDGDNCLYSH 189
>Z98866-11|CAB11564.2| 335|Caenorhabditis elegans Hypothetical
protein Y49E10.14 protein.
Length = 335
Score = 34.7 bits (76), Expect = 0.036
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 82 VCKFFQQGYCRYGQNCRFEHV 144
+C F++G CRYG CRF HV
Sbjct: 189 ICHNFERGNCRYGPRCRFIHV 209
Score = 27.5 bits (58), Expect = 5.5
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +1
Query: 67 YPIMIVCKFFQQGYCRYGQNCRFEH 141
Y + F ++GYC Y NC + H
Sbjct: 99 YKTRLCDAFRREGYCPYNDNCTYAH 123
>U62896-1|AAB17868.1| 335|Caenorhabditis elegans PIE-1 protein.
Length = 335
Score = 34.7 bits (76), Expect = 0.036
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 82 VCKFFQQGYCRYGQNCRFEHV 144
+C F++G CRYG CRF HV
Sbjct: 189 ICHNFERGNCRYGPRCRFIHV 209
Score = 27.5 bits (58), Expect = 5.5
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +1
Query: 67 YPIMIVCKFFQQGYCRYGQNCRFEH 141
Y + F ++GYC Y NC + H
Sbjct: 99 YKTRLCDAFRREGYCPYNDNCTYAH 123
>AL117204-10|CAB55125.1| 196|Caenorhabditis elegans Hypothetical
protein Y116A8C.19 protein.
Length = 196
Score = 34.3 bits (75), Expect = 0.048
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +1
Query: 64 NYPIMIVCKFFQQGYCRYGQNCRFEH-VYGSKYTYHATTPQPVVTNTE 204
NY ++ KF GYC+YG C+F H GS T + N E
Sbjct: 124 NYKTVLCDKFSTTGYCKYGARCQFIHRALGSTSTTESAEMADFKLNVE 171
>AL117204-8|CAB55123.1| 205|Caenorhabditis elegans Hypothetical
protein Y116A8C.17 protein.
Length = 205
Score = 33.9 bits (74), Expect = 0.064
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 64 NYPIMIVCKFFQQGYCRYGQNCRFEH 141
NY ++ KF GYC+YG C+F H
Sbjct: 133 NYKTVLCDKFTTTGYCKYGARCQFIH 158
>AL117204-11|CAB55126.1| 201|Caenorhabditis elegans Hypothetical
protein Y116A8C.20 protein.
Length = 201
Score = 33.1 bits (72), Expect = 0.11
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 64 NYPIMIVCKFFQQGYCRYGQNCRFEH 141
NY ++ KF GYC+YG C+F H
Sbjct: 129 NYKTVLCDKFTTTGYCKYGIRCQFIH 154
>Z79695-4|CAB01969.3| 374|Caenorhabditis elegans Hypothetical
protein F27D4.4a protein.
Length = 374
Score = 32.7 bits (71), Expect = 0.15
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 70 PIMIVCKFFQQGYCRYGQNCRFEH 141
P ++C FF+QG C G C+F H
Sbjct: 91 PKSLLCVFFKQGLCGKGAKCKFSH 114
>Z74476-2|CAA98962.1| 200|Caenorhabditis elegans Hypothetical
protein W05B10.2 protein.
Length = 200
Score = 31.5 bits (68), Expect = 0.34
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 85 CKFFQQGYCRYGQNCRFEH 141
CK + +G CR+G CRF H
Sbjct: 139 CKNYLKGKCRFGDKCRFSH 157
>AL110495-2|CAB60410.1| 203|Caenorhabditis elegans Hypothetical
protein Y60A9.3 protein.
Length = 203
Score = 31.1 bits (67), Expect = 0.45
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 64 NYPIMIVCKFFQQGYCRYGQNCRFEH 141
NY ++ KF G+C+YG C+F H
Sbjct: 129 NYKTVLCNKFSTTGHCKYGIRCQFIH 154
>Z74033-2|CAA98476.2| 419|Caenorhabditis elegans Hypothetical
protein F38B7.1b protein.
Length = 419
Score = 30.3 bits (65), Expect = 0.78
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Frame = +1
Query: 91 FFQQGYCRYGQNCRFEH----VYGSKYTYHATTPQP 186
F Q GYC YG C F H S+Y+ +TP P
Sbjct: 204 FHQSGYCPYGPRCHFIHNEPPSAQSQYSTPISTPVP 239
>Z74033-1|CAA98475.2| 460|Caenorhabditis elegans Hypothetical
protein F38B7.1a protein.
Length = 460
Score = 30.3 bits (65), Expect = 0.78
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Frame = +1
Query: 91 FFQQGYCRYGQNCRFEH----VYGSKYTYHATTPQP 186
F Q GYC YG C F H S+Y+ +TP P
Sbjct: 245 FHQSGYCPYGPRCHFIHNEPPSAQSQYSTPISTPVP 280
>Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical
protein F11A10.8 protein.
Length = 302
Score = 30.3 bits (65), Expect = 0.78
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 79 IVCKFFQQGYCRYGQNCRFEHVY 147
+VCK + +G C+ G C F H Y
Sbjct: 80 VVCKHWLRGLCKKGDQCEFLHEY 102
Score = 27.9 bits (59), Expect = 4.2
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +1
Query: 85 CKFFQQGYCRYGQNCRFEH 141
C ++ +G+CR+G C+ H
Sbjct: 138 CPWYDRGFCRHGPYCKHRH 156
>AC024826-3|AAP13746.1| 343|Caenorhabditis elegans Hypothetical
protein Y55F3AM.6b protein.
Length = 343
Score = 30.3 bits (65), Expect = 0.78
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 85 CKFFQQGYCRYGQNCRFEH 141
C++F GYC G C F H
Sbjct: 8 CRYFANGYCSKGNTCTFTH 26
Score = 27.9 bits (59), Expect = 4.2
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 82 VCKFFQQGYCRYGQNCRFEH 141
+C F G C YG+ CRF H
Sbjct: 35 ICHFNLVGKCSYGRACRFLH 54
>AC024826-2|AAF60798.1| 413|Caenorhabditis elegans Hypothetical
protein Y55F3AM.6a protein.
Length = 413
Score = 30.3 bits (65), Expect = 0.78
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 85 CKFFQQGYCRYGQNCRFEH 141
C++F GYC G C F H
Sbjct: 8 CRYFANGYCSKGNTCTFTH 26
Score = 27.9 bits (59), Expect = 4.2
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 82 VCKFFQQGYCRYGQNCRFEH 141
+C F G C YG+ CRF H
Sbjct: 35 ICHFNLVGKCSYGRACRFLH 54
>U41007-19|AAA82274.1| 432|Caenorhabditis elegans Hypothetical
protein C33H5.17 protein.
Length = 432
Score = 29.5 bits (63), Expect = 1.4
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 85 CKFFQQGYCRYGQNCRFEHVY 147
C F C++ +NCRF H Y
Sbjct: 124 CTHFLSSSCKFNENCRFSHGY 144
>Z82267-5|CAB05193.1| 203|Caenorhabditis elegans Hypothetical
protein F38C2.7 protein.
Length = 203
Score = 29.1 bits (62), Expect = 1.8
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 64 NYPIMIVCKFFQQGYCRYGQNCRFEH 141
NY ++ F G+C+YG C+F H
Sbjct: 129 NYKTVLCNNFSTTGHCKYGIRCQFIH 154
Score = 26.6 bits (56), Expect = 9.7
Identities = 9/21 (42%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = +1
Query: 82 VCKFFQQGY-CRYGQNCRFEH 141
+C F ++G C YG+ C+F H
Sbjct: 93 LCGFHRRGQKCAYGEKCKFAH 113
>Z82261-4|CAB05147.1| 203|Caenorhabditis elegans Hypothetical
protein C35D6.4 protein.
Length = 203
Score = 29.1 bits (62), Expect = 1.8
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 64 NYPIMIVCKFFQQGYCRYGQNCRFEH 141
NY ++ F G+C+YG C+F H
Sbjct: 129 NYKTVLCNNFSTTGHCKYGIRCQFIH 154
Score = 26.6 bits (56), Expect = 9.7
Identities = 9/21 (42%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = +1
Query: 82 VCKFFQQGY-CRYGQNCRFEH 141
+C F ++G C YG+ C+F H
Sbjct: 93 LCGFHRRGQKCAYGEKCKFAH 113
>Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical
protein T11G6.8 protein.
Length = 408
Score = 29.1 bits (62), Expect = 1.8
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +1
Query: 82 VCKFFQQGYCRYGQNCRFEH 141
+C FF +G C+ G+ C + H
Sbjct: 167 ICSFFVKGECKRGEECPYRH 186
>Z82267-3|CAB05191.1| 186|Caenorhabditis elegans Hypothetical
protein F38C2.5 protein.
Length = 186
Score = 28.3 bits (60), Expect = 3.2
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 67 YPIMIVCKFFQQGYCRYGQNCRFEH 141
Y ++ F + G+C+YG C+F H
Sbjct: 116 YKTVLCDNFSRTGHCKYGTKCQFIH 140
>Z70271-7|CAJ80829.1| 559|Caenorhabditis elegans Hypothetical
protein W08D2.3b protein.
Length = 559
Score = 28.3 bits (60), Expect = 3.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 240 CLYLIHKLFISVLRVSHHRLWSCCMICVFGTV 145
CL LI F+++ +H L C + VFGTV
Sbjct: 102 CLILISACFLALPHAAHIILLLCIVFIVFGTV 133
>Z70271-6|CAA94232.1| 562|Caenorhabditis elegans Hypothetical
protein W08D2.3a protein.
Length = 562
Score = 28.3 bits (60), Expect = 3.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 240 CLYLIHKLFISVLRVSHHRLWSCCMICVFGTV 145
CL LI F+++ +H L C + VFGTV
Sbjct: 105 CLILISACFLALPHAAHIILLLCIVFIVFGTV 136
>U41109-13|AAB37036.1| 264|Caenorhabditis elegans Posterior
segregation protein 1 protein.
Length = 264
Score = 28.3 bits (60), Expect = 3.2
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 67 YPIMIVCKFFQQGYCRYGQNCRFEH 141
Y ++ KF G C+YG C+F H
Sbjct: 142 YKTVLCDKFSMTGNCKYGTRCQFIH 166
>AF039716-7|AAB96735.3| 617|Caenorhabditis elegans
Sodium:neurotransmitter symporterfamily protein 1
protein.
Length = 617
Score = 28.3 bits (60), Expect = 3.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -3
Query: 393 LVLKYYFFSIHI*KASFPLVIDHEFPELSASHCR 292
L L YYF++ H ++ P + FPE + CR
Sbjct: 127 LFLYYYFWTFHAGRSGLPWLNCKAFPEFVSQPCR 160
>AB006208-1|BAA33854.1| 264|Caenorhabditis elegans cytoplasmic
zinc-finger protein protein.
Length = 264
Score = 28.3 bits (60), Expect = 3.2
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 67 YPIMIVCKFFQQGYCRYGQNCRFEH 141
Y ++ KF G C+YG C+F H
Sbjct: 142 YKTVLCDKFSMTGNCKYGTRCQFIH 166
>Z92803-1|CAB07242.2| 384|Caenorhabditis elegans Hypothetical
protein K01G5.1 protein.
Length = 384
Score = 27.9 bits (59), Expect = 4.2
Identities = 8/21 (38%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
Frame = +1
Query: 82 VCKFFQQ-GYCRYGQNCRFEH 141
+CK +++ G+C +G +C+F H
Sbjct: 180 ICKDYKETGFCTFGDSCKFVH 200
>AF304126-1|AAG50239.1| 384|Caenorhabditis elegans RING and zinc
finger protein protein.
Length = 384
Score = 27.9 bits (59), Expect = 4.2
Identities = 8/21 (38%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
Frame = +1
Query: 82 VCKFFQQ-GYCRYGQNCRFEH 141
+CK +++ G+C +G +C+F H
Sbjct: 180 ICKDYKETGFCTFGDSCKFVH 200
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 27.9 bits (59), Expect = 4.2
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 82 VCKFFQQGYCRYGQN-CRFEHV 144
+CK FQ G C G N CR+ HV
Sbjct: 146 ICKEFQTGRCARGVNRCRYWHV 167
>Z99281-15|CAB16528.1| 199|Caenorhabditis elegans Hypothetical
protein Y57G11C.25 protein.
Length = 199
Score = 27.5 bits (58), Expect = 5.5
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +1
Query: 67 YPIMIVCKFFQQGYCRYGQNCRFEH 141
Y ++ F G+C+YG C+F H
Sbjct: 112 YKTVLCDNFSTTGHCKYGTKCQFIH 136
>Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical protein
C06B8.7 protein.
Length = 3118
Score = 27.5 bits (58), Expect = 5.5
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 247 KSVYTEANGYSRVMHPTM 300
+SV T NGYS + HPT+
Sbjct: 2958 RSVSTNPNGYSEITHPTV 2975
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,596,215
Number of Sequences: 27780
Number of extensions: 211183
Number of successful extensions: 607
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 607
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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