Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1401
         (782 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    25   2.0  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           25   3.5  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    24   6.1  

>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
           protein I protein.
          Length = 1340

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
 Frame = +2

Query: 20  SKMLFVLLYAVILNGINCE-PEAVRDNFDYFNYGANDDVLKNLESQLSKDEVVLRPQEVK 196
           S++L V+++    +G+    P+ +R N +Y        V+ N  SQLSK +++L+ +   
Sbjct: 7   SRILTVIIFIGAAHGLLVVGPKFIRANQEYTL------VISNFNSQLSKVDLLLKLEGET 60

Query: 197 DWPQQSLNVGQITAVSIN 250
           D     LNV ++  V  N
Sbjct: 61  DNGLSVLNVTKMVDVRRN 78


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +1

Query: 451 HHDNVWVTDVAKHQVYKYTQVTTDI 525
           +HDN W T++ +     YT +  +I
Sbjct: 801 YHDNSWSTNIVECSAAGYTDIPNNI 825


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
            protein.
          Length = 1077

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +2

Query: 14   NSSKMLFVLLYAVILNGIN 70
            +SS +LF LL   +LNGIN
Sbjct: 1024 SSSTLLFGLLRLPVLNGIN 1042


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 840,193
Number of Sequences: 2352
Number of extensions: 17814
Number of successful extensions: 199
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 199
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81913191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)