Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1394
(604 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 150 7e-37
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 149 1e-36
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 149 2e-36
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 147 5e-36
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 145 2e-35
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 121 4e-28
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 80 2e-15
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 80 2e-15
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 2e-15
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 79 3e-15
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 3e-15
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 6e-15
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 77 1e-14
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 8e-14
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 1e-13
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 3e-13
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 71 5e-13
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 66 2e-11
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 3e-11
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 66 3e-11
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 62 3e-10
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 53 2e-07
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 50 1e-06
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 50 1e-06
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 40 0.002
SB_49423| Best HMM Match : Dicty_CAD (HMM E-Value=6.4) 33 0.18
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 31 0.54
SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23) 31 0.95
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 29 2.2
SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2) 29 2.2
SB_52687| Best HMM Match : Myb_DNA-binding (HMM E-Value=2.7e-09) 29 2.9
SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_48387| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_16139| Best HMM Match : rve (HMM E-Value=3.6e-21) 27 8.8
SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 150 bits (364), Expect = 7e-37
Identities = 67/79 (84%), Positives = 71/79 (89%)
Frame = +2
Query: 26 IYSSHK*NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYY 205
+YSS KMREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYY
Sbjct: 205 VYSSKLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYY 264
Query: 206 NEASGGKYVPRAILVDWSP 262
NEA+GGKYVPRA+LVD P
Sbjct: 265 NEATGGKYVPRAVLVDLEP 283
Score = 149 bits (362), Expect = 1e-36
Identities = 67/67 (100%), Positives = 67/67 (100%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 432
LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC
Sbjct: 281 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 340
Query: 433 DCLQGFQ 453
DCLQGFQ
Sbjct: 341 DCLQGFQ 347
Score = 68.1 bits (159), Expect = 5e-12
Identities = 30/31 (96%), Positives = 31/31 (100%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYN 602
KIREEYPDRIMNT+SVVPSPKVSDTVVEPYN
Sbjct: 367 KIREEYPDRIMNTFSVVPSPKVSDTVVEPYN 397
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 149 bits (362), Expect = 1e-36
Identities = 67/67 (100%), Positives = 67/67 (100%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 432
LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC
Sbjct: 68 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 127
Query: 433 DCLQGFQ 453
DCLQGFQ
Sbjct: 128 DCLQGFQ 134
Score = 145 bits (352), Expect = 2e-35
Identities = 64/70 (91%), Positives = 66/70 (94%)
Frame = +2
Query: 53 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 233 PRAILVDWSP 262
PRAILVD P
Sbjct: 61 PRAILVDLEP 70
Score = 68.1 bits (159), Expect = 5e-12
Identities = 30/31 (96%), Positives = 31/31 (100%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYN 602
KIREEYPDRIMNT+SVVPSPKVSDTVVEPYN
Sbjct: 154 KIREEYPDRIMNTFSVVPSPKVSDTVVEPYN 184
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 149 bits (360), Expect = 2e-36
Identities = 66/67 (98%), Positives = 67/67 (100%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 432
LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC
Sbjct: 13 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 72
Query: 433 DCLQGFQ 453
DC+QGFQ
Sbjct: 73 DCIQGFQ 79
Score = 69.7 bits (163), Expect = 2e-12
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = +3
Query: 507 LKIREEYPDRIMNTYSVVPSPKVSDTVVEPYN 602
LKIREEYPDRIMNT+SVVPSPKVSDTVVEPYN
Sbjct: 98 LKIREEYPDRIMNTFSVVPSPKVSDTVVEPYN 129
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2
Query: 221 GKYVPRAILVDWSP 262
GKYVPRA+LVD P
Sbjct: 2 GKYVPRAVLVDLEP 15
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 147 bits (357), Expect = 5e-36
Identities = 65/67 (97%), Positives = 67/67 (100%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 432
LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAESC
Sbjct: 68 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVVRKEAESC 127
Query: 433 DCLQGFQ 453
DC+QGFQ
Sbjct: 128 DCIQGFQ 134
Score = 141 bits (341), Expect = 5e-34
Identities = 60/70 (85%), Positives = 66/70 (94%)
Frame = +2
Query: 53 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MREIV +QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 233 PRAILVDWSP 262
PR++L+D P
Sbjct: 61 PRSVLIDLEP 70
Score = 67.7 bits (158), Expect = 7e-12
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYN 602
KIREEYPDRIMNT+S+VPSPKVSDTVVEPYN
Sbjct: 154 KIREEYPDRIMNTFSIVPSPKVSDTVVEPYN 184
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 145 bits (352), Expect = 2e-35
Identities = 64/70 (91%), Positives = 66/70 (94%)
Frame = +2
Query: 53 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 233 PRAILVDWSP 262
PRAILVD P
Sbjct: 61 PRAILVDLEP 70
Score = 58.4 bits (135), Expect = 4e-09
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVF 327
LEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 68 LEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 121 bits (292), Expect = 4e-28
Identities = 50/67 (74%), Positives = 59/67 (88%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 432
LEPGTMD+VR GP G +FRPDNFV QSGA NNWAKGHY+EGAEL+D++ DV+RKEAE+C
Sbjct: 24 LEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNIFDVLRKEAENC 83
Query: 433 DCLQGFQ 453
DC+QG Q
Sbjct: 84 DCMQGVQ 90
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKV 575
KIREEYPDRI++ +SVVPSPKV
Sbjct: 110 KIREEYPDRILSAFSVVPSPKV 131
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 215 SGGKYVPRAILVDWSP 262
+GG+YVPR+ILVD P
Sbjct: 11 TGGRYVPRSILVDLEP 26
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 79.8 bits (188), Expect = 2e-15
Identities = 35/66 (53%), Positives = 46/66 (69%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 432
LEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E+VD VLD +RK A+ C
Sbjct: 70 LEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLDRIRKLADQC 129
Query: 433 DCLQGF 450
LQGF
Sbjct: 130 TGLQGF 135
Score = 79.4 bits (187), Expect = 2e-15
Identities = 34/66 (51%), Positives = 46/66 (69%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 432
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD +RK A+ C
Sbjct: 503 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDRIRKLADQC 562
Query: 433 DCLQGF 450
LQGF
Sbjct: 563 TGLQGF 568
Score = 62.5 bits (145), Expect = 3e-10
Identities = 30/72 (41%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +2
Query: 53 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 226
MRE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 227 YVPRAILVDWSP 262
+VPRA+ VD P
Sbjct: 61 HVPRAVFVDLEP 72
Score = 60.5 bits (140), Expect = 1e-09
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +2
Query: 56 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 229
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 230 VPRAILVDWSP 262
VPRA+ VD P
Sbjct: 495 VPRAVFVDLEP 505
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYN 602
++ +Y + +++ P+P+VS VVEPYN
Sbjct: 156 RLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 186
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYN 602
++ +Y + +++ P+P+VS VVEPYN
Sbjct: 589 RLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 619
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 79.8 bits (188), Expect = 2e-15
Identities = 34/66 (51%), Positives = 46/66 (69%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 432
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+ C
Sbjct: 655 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQC 714
Query: 433 DCLQGF 450
LQGF
Sbjct: 715 TGLQGF 720
Score = 79.0 bits (186), Expect = 3e-15
Identities = 34/66 (51%), Positives = 46/66 (69%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 432
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD +RK A+ C
Sbjct: 134 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 193
Query: 433 DCLQGF 450
LQGF
Sbjct: 194 TGLQGF 199
Score = 60.9 bits (141), Expect = 8e-10
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +2
Query: 53 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 226
+RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 227 YVPRAILVDWSP 262
+VPRA+ VD P
Sbjct: 646 HVPRAVFVDLEP 657
Score = 60.5 bits (140), Expect = 1e-09
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +2
Query: 56 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 229
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 230 VPRAILVDWSP 262
VPRA+ VD P
Sbjct: 574 VPRAVFVDLEP 584
Score = 60.1 bits (139), Expect = 1e-09
Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +2
Query: 56 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 229
RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 66 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 125
Query: 230 VPRAILVDWSP 262
VPRA+ VD P
Sbjct: 126 VPRAVFVDLEP 136
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYN 602
++ +Y + +++ P+P+VS VVEPYN
Sbjct: 741 RLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 771
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYN 602
++ +Y + +++ P+P++S VVEPYN
Sbjct: 220 RLSVDYGKKSKLEFAIYPAPQISTAVVEPYN 250
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 79.4 bits (187), Expect = 2e-15
Identities = 33/66 (50%), Positives = 47/66 (71%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 432
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D+VLD +RK A+ C
Sbjct: 70 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLDRLRKLADGC 129
Query: 433 DCLQGF 450
LQGF
Sbjct: 130 TGLQGF 135
Score = 58.8 bits (136), Expect = 3e-09
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +2
Query: 53 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 226
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 227 YVPRAILVDWSP 262
+VPRA+ D P
Sbjct: 61 HVPRAVFCDLEP 72
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYN 602
++ +Y + +++ P+P++S VVEPYN
Sbjct: 156 RLSVDYGKKSKLEFAIYPAPQISTAVVEPYN 186
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 79.0 bits (186), Expect = 3e-15
Identities = 33/66 (50%), Positives = 46/66 (69%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 432
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C
Sbjct: 69 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDRIRKLADQC 128
Query: 433 DCLQGF 450
LQGF
Sbjct: 129 TGLQGF 134
Score = 60.5 bits (140), Expect = 1e-09
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +2
Query: 56 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 229
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 230 VPRAILVDWSP 262
VPRA+ VD P
Sbjct: 61 VPRAVFVDLEP 71
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYN 602
++ +Y + +++ P+P+VS VVEPYN
Sbjct: 155 RLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 185
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 79.0 bits (186), Expect = 3e-15
Identities = 33/66 (50%), Positives = 46/66 (69%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 432
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C
Sbjct: 874 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDRIRKLADQC 933
Query: 433 DCLQGF 450
LQGF
Sbjct: 934 TGLQGF 939
Score = 76.6 bits (180), Expect = 1e-14
Identities = 33/66 (50%), Positives = 45/66 (68%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 432
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E +D VLD +RK A+ C
Sbjct: 441 LEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDRLRKLADGC 500
Query: 433 DCLQGF 450
LQGF
Sbjct: 501 TGLQGF 506
Score = 59.3 bits (137), Expect = 2e-09
Identities = 29/71 (40%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +2
Query: 56 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 229
RE + I GQ G QIG WE+ EHGI P G D + + N ++ E GK+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 230 VPRAILVDWSP 262
VPRA+ VD P
Sbjct: 433 VPRAVFVDLEP 443
Score = 57.2 bits (132), Expect = 1e-08
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +2
Query: 56 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 229
RE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK+
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 230 VPRAILVDWSP 262
VPRA+ D P
Sbjct: 866 VPRAVFADLEP 876
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYN 602
++ +Y + +++ P+P++S VVEPYN
Sbjct: 960 RLSVDYGKKSKLEFAIYPAPQISTAVVEPYN 990
Score = 29.1 bits (62), Expect = 2.9
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYN 602
++ +Y + +++ P+P +S VVEPYN
Sbjct: 527 RLSVDYGKKSKLEFAIYPAPHISSAVVEPYN 557
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 77.8 bits (183), Expect = 6e-15
Identities = 31/66 (46%), Positives = 46/66 (69%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 432
LEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G + +D+VLD +RK A+ C
Sbjct: 488 LEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDRIRKLADQC 547
Query: 433 DCLQGF 450
LQGF
Sbjct: 548 SGLQGF 553
Score = 76.2 bits (179), Expect = 2e-14
Identities = 32/66 (48%), Positives = 46/66 (69%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 432
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G +L++ VLD +RK A+ C
Sbjct: 55 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQC 114
Query: 433 DCLQGF 450
LQGF
Sbjct: 115 TGLQGF 120
Score = 60.1 bits (139), Expect = 1e-09
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +2
Query: 56 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 229
RE V I GQ G Q+G WE+ EHGI P G D + + N +++E GK+
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 230 VPRAILVDWSPA 265
VPRA+ VD P+
Sbjct: 480 VPRAVFVDLEPS 491
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +2
Query: 98 IGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVDWSP 262
+G WE+ EHGI P G D + + N +++E GK+VPRA+ D P
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEP 57
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYN 602
++ +Y + +++ P+P++S VVEPYN
Sbjct: 141 RLSVDYGKKSKLEFAIYPAPQISTAVVEPYN 171
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYN 602
++ +Y + +++ P+P++S VVEPYN
Sbjct: 574 RLSVDYGKKSKLEFAIYPAPQISTAVVEPYN 604
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 77.0 bits (181), Expect = 1e-14
Identities = 33/66 (50%), Positives = 45/66 (68%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 432
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD RK A+ C
Sbjct: 70 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRCRKLADQC 129
Query: 433 DCLQGF 450
LQGF
Sbjct: 130 TGLQGF 135
Score = 61.3 bits (142), Expect = 6e-10
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +2
Query: 53 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 226
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 227 YVPRAILVDWSP 262
+VPRA+ VD P
Sbjct: 61 HVPRAVFVDLEP 72
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYN 602
++ +Y + +++ P+P++S VVEPYN
Sbjct: 156 RLSVDYGKKSKLEFAIYPAPQISTAVVEPYN 186
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 74.1 bits (174), Expect = 8e-14
Identities = 31/66 (46%), Positives = 44/66 (66%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 432
LEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +RK A+ C
Sbjct: 35 LEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQC 94
Query: 433 DCLQGF 450
LQGF
Sbjct: 95 TGLQGF 100
Score = 31.1 bits (67), Expect = 0.72
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 185 ERINVYYNEASGGKYVPRAILVDWSP 262
+ N ++ E GK+VPRA+ VD P
Sbjct: 12 DSFNTFFAETGAGKHVPRAVFVDLEP 37
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYN 602
++ +Y + ++V P+P++S VVEPYN
Sbjct: 121 RLSVDYGKKSKLEFAVYPAPQISTAVVEPYN 151
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 73.7 bits (173), Expect = 1e-13
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +1
Query: 271 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 450
D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+ C LQGF
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYN 602
++ +Y + +++ P+P++S VVEPYN
Sbjct: 93 RLSVDYGKKSKLEFAIYPAPQISTAVVEPYN 123
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 72.1 bits (169), Expect = 3e-13
Identities = 29/66 (43%), Positives = 44/66 (66%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 432
LEP +D VR+G + ++ P+ + G+ A NN+A+GHYT G E+V+ V+D +RK + C
Sbjct: 981 LEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKEMVEVVMDKIRKMTDQC 1040
Query: 433 DCLQGF 450
LQGF
Sbjct: 1041 SGLQGF 1046
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +2
Query: 206 NEASGGKYVPRAILVDWSP 262
+EA+ GKYVPRA+LVD P
Sbjct: 965 SEAAAGKYVPRAVLVDLEP 983
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 504 HLKIREEYPDRIMNTYSVVPSPKVSDTVVEPYN 602
HL + +Y + ++V P+P +S VVEPYN
Sbjct: 1067 HLSV--DYGKKSKLEFAVYPAPHISTAVVEPYN 1097
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 71.3 bits (167), Expect = 5e-13
Identities = 30/58 (51%), Positives = 41/58 (70%)
Frame = +1
Query: 277 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 450
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+ C LQGF
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 60
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYN 602
++ +Y + +++ P+P++S VVEPYN
Sbjct: 81 RLSVDYGKKSKLEFAIYPAPQISTAVVEPYN 111
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 66.5 bits (155), Expect = 2e-11
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = +1
Query: 331 QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQ 453
Q+ A NNWAKG YTEGAEL+DS +D +RK AE+CD +QGFQ
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQ 42
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/31 (67%), Positives = 28/31 (90%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYN 602
KIREEYPDR+++++ V+PSP VS+TV EPYN
Sbjct: 62 KIREEYPDRLVSSFCVLPSPLVSETVTEPYN 92
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 65.7 bits (153), Expect = 3e-11
Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Frame = +2
Query: 53 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQ--LERINVYYNEASGGK 226
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 227 YVPRAILVDWSPA 265
+VPRA+ VD P+
Sbjct: 61 HVPRAVFVDLEPS 73
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 65.7 bits (153), Expect = 3e-11
Identities = 27/58 (46%), Positives = 39/58 (67%)
Frame = +1
Query: 277 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 450
+R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +RK A+ C LQGF
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGF 60
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYN 602
++ +Y + ++V P+P++S VVEPYN
Sbjct: 81 RLSVDYGKKSKLEFAVYPAPQISTAVVEPYN 111
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 62.1 bits (144), Expect = 3e-10
Identities = 32/78 (41%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +2
Query: 53 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 226
MRE + I GQ G QIG WE+ EHGI P G D + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 227 YVPRAILVDWSPAPWTLS 280
+VPRA+ VD P LS
Sbjct: 61 HVPRAVFVDLEPTVVALS 78
Score = 56.4 bits (130), Expect = 2e-08
Identities = 24/47 (51%), Positives = 32/47 (68%)
Frame = +1
Query: 310 PDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 450
P+ + G+ A NN+A+GHYT G + VD VLD +RK A+ C LQGF
Sbjct: 79 PEQLITGKEDAANNYARGHYTIGKQQVDQVLDRLRKLADQCSGLQGF 125
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYN 602
++ +Y + ++V P+P ++ VVEPYN
Sbjct: 146 RLSVDYGKKSKLEFAVYPAPHIASAVVEPYN 176
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +1
Query: 277 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 417
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +1
Query: 277 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 417
VR G + +F PD + G+ A NN+A+GHYT G E +D L+ +RK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +1
Query: 310 PDNFVFGQS-GAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 450
P F Q G+GNNWA G G + +D VLD+V++E E CD L GF
Sbjct: 94 PKGQQFSQKRGSGNNWAHGFSEHGPKSIDKVLDLVQREVEKCDRLDGF 141
Score = 32.3 bits (70), Expect = 0.31
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +2
Query: 62 IVHIQAGQCGNQIGAKFWEIISDE 133
IV +Q GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 50.0 bits (114), Expect = 1e-06
Identities = 20/30 (66%), Positives = 27/30 (90%)
Frame = +3
Query: 513 IREEYPDRIMNTYSVVPSPKVSDTVVEPYN 602
++EEYPDRI+++ SV PSP+VS+ VVEPYN
Sbjct: 36 LQEEYPDRILSSVSVFPSPRVSEIVVEPYN 65
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 409 VRKEAESCDCLQGFQ 453
+RKEAE CD +QGFQ
Sbjct: 1 MRKEAEDCDAIQGFQ 15
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 46.0 bits (104), Expect = 2e-05
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +2
Query: 53 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLER----INVYYNEASG 220
MRE + I GQ G QIG WE+ EHGI P G H SD +R + +++E +
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFSETAS 253
Query: 221 GKY 229
GK+
Sbjct: 254 GKH 256
Score = 31.1 bits (67), Expect = 0.72
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYN 602
++ +Y R ++V P+P++S VVEPYN
Sbjct: 287 RLSVDYGKRSKLEFAVYPAPQISTAVVEPYN 317
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 44.8 bits (101), Expect = 5e-05
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +2
Query: 110 FWEIISDEHGIDPTGAYHG-DSDLQLERINVYYNE 211
FWE+I++EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Frame = +1
Query: 307 RPDNFVFGQSGAGNNWAKGHYTE-----GAELVDSVLDVVRKEAESCDCLQG 447
R N + G+ G GNN+A G++ G L+ +D +RKE E CD G
Sbjct: 65 RDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLHMTMDAMRKEVERCDSFAG 116
>SB_49423| Best HMM Match : Dicty_CAD (HMM E-Value=6.4)
Length = 384
Score = 33.1 bits (72), Expect = 0.18
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = -2
Query: 447 SLEAITRFRFLSNDV*N*IDELSTLRVVSLGPVVAGAGLSEDEVVRTEDLSERSRADRVH 268
S++A R R +S V I +L V++L PV+ G +++D V + RSR R H
Sbjct: 204 SVDATLRGRDISAGVYQEIRDLGGAGVIALKPVMRGPDINDDGSVCQKRRPNRSRCPRRH 263
Query: 267 GAGL 256
G+
Sbjct: 264 RCGI 267
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 31.5 bits (68), Expect = 0.54
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNW 354
+E G ++++ GP +F + SG GNNW
Sbjct: 82 MEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23)
Length = 3368
Score = 30.7 bits (66), Expect = 0.95
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -3
Query: 428 DSASFRTTSKTESTSSAPSV*CPLAQL 348
DSASFR +S + ++ SV CPL QL
Sbjct: 2663 DSASFRNSSNDKESADPSSVRCPLLQL 2689
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYN 602
++ +Y + +++ P+P++S VVEPYN
Sbjct: 31 RLSVDYGKKSKLEFAIYPAPQISTAVVEPYN 61
>SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2)
Length = 210
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 365 CPLAQLLPAPDCPKTKLSGRKICP 294
CPL ++L P CP K+ +CP
Sbjct: 18 CPLKEMLDTPLCPLKKMLNTPLCP 41
Score = 29.1 bits (62), Expect = 2.9
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 365 CPLAQLLPAPDCPKTKLSGRKICP 294
CPL ++L AP CP ++ +CP
Sbjct: 172 CPLKEMLDAPLCPLKEMLDTPLCP 195
Score = 27.9 bits (59), Expect = 6.7
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 365 CPLAQLLPAPDCPKTKLSGRKICP 294
CPL ++L P CP ++ +CP
Sbjct: 62 CPLKEMLDTPLCPLKEMLNTPLCP 85
Score = 27.5 bits (58), Expect = 8.8
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 365 CPLAQLLPAPDCPKTKLSGRKICP 294
CPL ++L P CP ++ +CP
Sbjct: 51 CPLKEMLDTPLCPLKEMLDTPLCP 74
Score = 27.5 bits (58), Expect = 8.8
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 365 CPLAQLLPAPDCPKTKLSGRKICP 294
CPL ++L P CP ++ +CP
Sbjct: 73 CPLKEMLNTPLCPLKEMLNTPLCP 96
Score = 27.5 bits (58), Expect = 8.8
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 365 CPLAQLLPAPDCPKTKLSGRKICP 294
CPL ++L P CP ++ +CP
Sbjct: 128 CPLKEMLNTPLCPLKEMLNTPLCP 151
Score = 27.5 bits (58), Expect = 8.8
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 365 CPLAQLLPAPDCPKTKLSGRKICP 294
CPL ++L P CP ++ +CP
Sbjct: 139 CPLKEMLNTPLCPLKEMLNTPLCP 162
Score = 27.5 bits (58), Expect = 8.8
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 365 CPLAQLLPAPDCPKTKLSGRKICP 294
CPL ++L P CP ++ +CP
Sbjct: 150 CPLKEMLNTPLCPLKEMLNTPLCP 173
>SB_52687| Best HMM Match : Myb_DNA-binding (HMM E-Value=2.7e-09)
Length = 166
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 423 GIV*LPPGIPTDTLARRRHRFRYGHPPH 506
G+V LPPG+ T H RYGHP H
Sbjct: 7 GMVTLPPGMVTLPPGMVTHFTRYGHPFH 34
>SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1059
Score = 28.3 bits (60), Expect = 5.1
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVS 578
K++E+YPD I++++ + P K S
Sbjct: 486 KLQEQYPDHILSSFELFPCEKAS 508
>SB_48387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 941
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = -2
Query: 441 EAITRFRFLSNDV*N*IDELSTLRVVSLGPVVAGAGLSEDEVVRTEDLSERSRADR 274
E T R S ++ ++ELS ++ + + A G S DE+ R D + + +R
Sbjct: 589 EEATTLRVQSQELRASLEELSQVKTKEINTLRAELGKSRDEIARKNDREKNALRER 644
>SB_16139| Best HMM Match : rve (HMM E-Value=3.6e-21)
Length = 889
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = -1
Query: 352 SCCXXXXXXXRSCPDGRSVRKVQSGQSPWCRAPVDEDGAGHVLAAGGFI 206
+CC S DG++ K +SG+ W +E+G G GG++
Sbjct: 229 ACCGGNITIRDSQLDGKTPDKNESGKRVWYEEEEEEEGEGE----GGYV 273
>SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -1
Query: 208 IVVYIDALQLQVRVPM-VGTGGVDAVLVGDDLPEL 107
I VY DA++LQV P+ G+D + V D EL
Sbjct: 48 ITVYADAVELQVTYPLRAPLRGIDLITVYADAVEL 82
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,782,012
Number of Sequences: 59808
Number of extensions: 376292
Number of successful extensions: 1139
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1120
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1463691625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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