Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1393
         (722 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   1.9  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   2.5  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    23   3.3  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    23   3.3  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    23   3.3  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   4.4  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 12/45 (26%), Positives = 20/45 (44%)
 Frame = +1

Query: 139 RDIISMRSNRERPTFNYIPNSYXXXXXXXXXGSNNLHNHQPQSLV 273
           +D+++ R       F  IPN Y         GSN L  +  +++V
Sbjct: 757 KDLVAKRCEERGILFVPIPNKYYEAKQVYRIGSNGLQCYIDRNVV 801


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 6/57 (10%)
 Frame = +3

Query: 366 EMDEFSAKKNNSRVENWGVL---CDKIQGFFKTFKSQDILS---LNHVRIYCRRIAF 518
           ++  F +   N   EN+ ++   CDKI      F    IL    + +VRIYC+ I F
Sbjct: 18  KLSHFLSITPNYDFENFVIISPRCDKISAI--CFLLSTILGTCWIIYVRIYCKEIRF 72


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 639 FCFHHHTI*LDET*C*SVLFVFCE 710
           F F    + +D T C  +LFVFC+
Sbjct: 278 FSFKEIGLLVDSTYCLFLLFVFCD 301


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 639 FCFHHHTI*LDET*C*SVLFVFCE 710
           F F    + +D T C  +LFVFC+
Sbjct: 278 FSFKEIGLLVDSTYCLFLLFVFCD 301


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 639 FCFHHHTI*LDET*C*SVLFVFCE 710
           F F    + +D T C  +LFVFC+
Sbjct: 278 FSFKEIGLLVDSTYCLFLLFVFCD 301


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2

Query: 179 HLIIYQIHIVKKKL*KNLEVIISIITNHNLWFL 277
           HLI+ +++ VKK L K  + +     NH L  L
Sbjct: 179 HLILQRVNHVKKILEKETQTVAFPKDNHFLALL 211


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,403
Number of Sequences: 336
Number of extensions: 3433
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)