Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1393
         (722 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY187043-1|AAO39757.1|  171|Anopheles gambiae putative antennal ...    24   4.1  
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    23   7.2  

>AY187043-1|AAO39757.1|  171|Anopheles gambiae putative antennal
           carrier protein AP-1 protein.
          Length = 171

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 8/24 (33%), Positives = 18/24 (75%)
 Frame = +3

Query: 390 KNNSRVENWGVLCDKIQGFFKTFK 461
           ++N+R+EN  ++CD ++   ++FK
Sbjct: 45  ESNARIENGTIICDTLKCPAESFK 68


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 15/62 (24%), Positives = 31/62 (50%)
 Frame = -3

Query: 333 VRDKSNAHLTPN*DYFLYFRNQRLWLVIMEIITSRFFHNFFLTI*IWYIIKCRSLSVTSH 154
           +R  S+    PN D  + F N+ + +V   + +S F    F  + + Y++  R+ ++ + 
Sbjct: 71  LRPNSSTVAPPNGDNDIIFSNKLVQIVFCVLYSSIFVLGVFGNVLVCYVV-FRNKAMQTV 129

Query: 153 TN 148
           TN
Sbjct: 130 TN 131


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 665,410
Number of Sequences: 2352
Number of extensions: 12416
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)