Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1392
         (729 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    24   4.2  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   7.3  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   7.3  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    23   9.7  

>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +2

Query: 425 LISEFCCPSTKRVSCLLYGLPHLFI-FIYAKRSER 526
           LI+  C P  K    + YG+P +++ F YA   +R
Sbjct: 280 LIANECTPKLKYHYLMGYGIPAVYVLFSYASSIDR 314


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +3

Query: 687  WWYIPVWAHKTPYH 728
            WW+ P W  K P H
Sbjct: 1187 WWHGPDWLVKDPKH 1200


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = +3

Query: 432  LNFAVRVPSVSVVYCTVYLIYLFLFMLRGVNELSAHLVRS 551
            + F  R+P  +      Y+I   +F +R  +E S  LV S
Sbjct: 1947 IRFVPRLPQQAAFALYNYIIGYVMFYVRSTHECSQQLVGS 1986


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 10/40 (25%), Positives = 19/40 (47%)
 Frame = -3

Query: 715 LCAHTGMYHHPVYFCRETVMRFGLSFVGFSVLKNSKWTLK 596
           +C  T   H+ + F    V R   ++VG S +   +W+ +
Sbjct: 197 VCDETPSDHNTIKFVVGRVPRQRANYVGHSPVNGGRWSTR 236


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 736,965
Number of Sequences: 2352
Number of extensions: 14437
Number of successful extensions: 93
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 93
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)