Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1391
(763 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-12|CAJ30227.1| 558|Caenorhabditis elegans Hypothetical p... 112 3e-25
Z81068-4|CAE54896.1| 531|Caenorhabditis elegans Hypothetical pr... 112 3e-25
Z81068-3|CAB02983.1| 600|Caenorhabditis elegans Hypothetical pr... 112 3e-25
Z81068-2|CAB02984.1| 562|Caenorhabditis elegans Hypothetical pr... 112 3e-25
Z69385-1|CAA93424.2| 515|Caenorhabditis elegans Hypothetical pr... 103 1e-22
U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated p... 32 0.51
AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage ... 32 0.51
U49947-2|AAA93421.2| 1032|Caenorhabditis elegans Guanylyl cyclas... 28 6.3
AF025466-5|AAB71031.2| 428|Caenorhabditis elegans Nematode asta... 28 8.3
>Z81068-12|CAJ30227.1| 558|Caenorhabditis elegans Hypothetical
protein F25H5.3d protein.
Length = 558
Score = 112 bits (269), Expect = 3e-25
Identities = 55/88 (62%), Positives = 67/88 (76%)
Frame = +3
Query: 252 VIRLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSA 431
++R +GIICTIGPA +V +L+K++ GMN+AR+NFSHGSHEYHA TI N REA S+S
Sbjct: 72 LVRQTGIICTIGPACASVEMLQKLILNGMNIARLNFSHGSHEYHAGTIANVREAADSFSD 131
Query: 432 KLGSPFSLAIALDTKGPEIRTGLLEGAA 515
K + IALDTKGPEIRTGLL G A
Sbjct: 132 KR----VIGIALDTKGPEIRTGLLAGGA 155
Score = 95.5 bits (227), Expect = 4e-20
Identities = 43/89 (48%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Frame = +2
Query: 500 LGRGGSAEVELKKGETIKLTSSD-YQEKGNADTIYVDYKNITNVVKPGNRIFIDDGLISI 676
L G SAE+EL +G +I+LT+ + E G A ++VDYKNI V+ G+R++IDDGLIS+
Sbjct: 151 LAGGASAEIELARGASIRLTTDPHFSESGTAVNLFVDYKNIAKVLSVGSRVYIDDGLISL 210
Query: 677 ICQSVSADTLTCTIENGGMLGSGKASTCP 763
I + + D + C++ENGGMLGS K P
Sbjct: 211 IVEELQTDAVICSVENGGMLGSRKGVNLP 239
>Z81068-4|CAE54896.1| 531|Caenorhabditis elegans Hypothetical
protein F25H5.3c protein.
Length = 531
Score = 112 bits (269), Expect = 3e-25
Identities = 55/88 (62%), Positives = 67/88 (76%)
Frame = +3
Query: 252 VIRLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSA 431
++R +GIICTIGPA +V +L+K++ GMN+AR+NFSHGSHEYHA TI N REA S+S
Sbjct: 45 LVRQTGIICTIGPACASVEMLQKLILNGMNIARLNFSHGSHEYHAGTIANVREAADSFSD 104
Query: 432 KLGSPFSLAIALDTKGPEIRTGLLEGAA 515
K + IALDTKGPEIRTGLL G A
Sbjct: 105 KR----VIGIALDTKGPEIRTGLLAGGA 128
Score = 95.5 bits (227), Expect = 4e-20
Identities = 43/89 (48%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Frame = +2
Query: 500 LGRGGSAEVELKKGETIKLTSSD-YQEKGNADTIYVDYKNITNVVKPGNRIFIDDGLISI 676
L G SAE+EL +G +I+LT+ + E G A ++VDYKNI V+ G+R++IDDGLIS+
Sbjct: 124 LAGGASAEIELARGASIRLTTDPHFSESGTAVNLFVDYKNIAKVLSVGSRVYIDDGLISL 183
Query: 677 ICQSVSADTLTCTIENGGMLGSGKASTCP 763
I + + D + C++ENGGMLGS K P
Sbjct: 184 IVEELQTDAVICSVENGGMLGSRKGVNLP 212
>Z81068-3|CAB02983.1| 600|Caenorhabditis elegans Hypothetical
protein F25H5.3b protein.
Length = 600
Score = 112 bits (269), Expect = 3e-25
Identities = 55/88 (62%), Positives = 67/88 (76%)
Frame = +3
Query: 252 VIRLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSA 431
++R +GIICTIGPA +V +L+K++ GMN+AR+NFSHGSHEYHA TI N REA S+S
Sbjct: 114 LVRQTGIICTIGPACASVEMLQKLILNGMNIARLNFSHGSHEYHAGTIANVREAADSFSD 173
Query: 432 KLGSPFSLAIALDTKGPEIRTGLLEGAA 515
K + IALDTKGPEIRTGLL G A
Sbjct: 174 KR----VIGIALDTKGPEIRTGLLAGGA 197
Score = 95.5 bits (227), Expect = 4e-20
Identities = 43/89 (48%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Frame = +2
Query: 500 LGRGGSAEVELKKGETIKLTSSD-YQEKGNADTIYVDYKNITNVVKPGNRIFIDDGLISI 676
L G SAE+EL +G +I+LT+ + E G A ++VDYKNI V+ G+R++IDDGLIS+
Sbjct: 193 LAGGASAEIELARGASIRLTTDPHFSESGTAVNLFVDYKNIAKVLSVGSRVYIDDGLISL 252
Query: 677 ICQSVSADTLTCTIENGGMLGSGKASTCP 763
I + + D + C++ENGGMLGS K P
Sbjct: 253 IVEELQTDAVICSVENGGMLGSRKGVNLP 281
>Z81068-2|CAB02984.1| 562|Caenorhabditis elegans Hypothetical
protein F25H5.3a protein.
Length = 562
Score = 112 bits (269), Expect = 3e-25
Identities = 55/88 (62%), Positives = 67/88 (76%)
Frame = +3
Query: 252 VIRLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSA 431
++R +GIICTIGPA +V +L+K++ GMN+AR+NFSHGSHEYHA TI N REA S+S
Sbjct: 76 LVRQTGIICTIGPACASVEMLQKLILNGMNIARLNFSHGSHEYHAGTIANVREAADSFSD 135
Query: 432 KLGSPFSLAIALDTKGPEIRTGLLEGAA 515
K + IALDTKGPEIRTGLL G A
Sbjct: 136 KR----VIGIALDTKGPEIRTGLLAGGA 159
Score = 95.5 bits (227), Expect = 4e-20
Identities = 43/89 (48%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Frame = +2
Query: 500 LGRGGSAEVELKKGETIKLTSSD-YQEKGNADTIYVDYKNITNVVKPGNRIFIDDGLISI 676
L G SAE+EL +G +I+LT+ + E G A ++VDYKNI V+ G+R++IDDGLIS+
Sbjct: 155 LAGGASAEIELARGASIRLTTDPHFSESGTAVNLFVDYKNIAKVLSVGSRVYIDDGLISL 214
Query: 677 ICQSVSADTLTCTIENGGMLGSGKASTCP 763
I + + D + C++ENGGMLGS K P
Sbjct: 215 IVEELQTDAVICSVENGGMLGSRKGVNLP 243
>Z69385-1|CAA93424.2| 515|Caenorhabditis elegans Hypothetical
protein ZK593.1 protein.
Length = 515
Score = 103 bits (248), Expect = 1e-22
Identities = 49/81 (60%), Positives = 62/81 (76%)
Frame = +3
Query: 258 RLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKL 437
R +G+ICTIGPA +V L KM+ TGMN+AR+NFSHG+HE HA TI+ REA ++
Sbjct: 34 RKTGVICTIGPACSDVETLRKMINTGMNIARLNFSHGTHEAHAATIKTIREAAEN----- 88
Query: 438 GSPFSLAIALDTKGPEIRTGL 500
+PF +AIALDTKGPEIRTG+
Sbjct: 89 -APFPVAIALDTKGPEIRTGM 108
Score = 80.2 bits (189), Expect = 1e-15
Identities = 36/82 (43%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
Frame = +2
Query: 521 EVELKKGETIKLTSSDYQE-KGNADTIYVDYKNITNVVKPGNRIFIDDGLISIICQSVSA 697
EV+L+ G+++++++ E + IY DY+N+ VV+PG+RI+IDDGLIS+I +S
Sbjct: 115 EVQLENGKSVRVSTDPSMEFAATSSHIYADYRNLPKVVQPGSRIYIDDGLISLIVESCEE 174
Query: 698 DTLTCTIENGGMLGSGKASTCP 763
+ CTIENGG LG+ K P
Sbjct: 175 TAVICTIENGGALGTRKGVNLP 196
>U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated
protein 2, isoform b protein.
Length = 2027
Score = 31.9 bits (69), Expect = 0.51
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -1
Query: 475 LVSNAMAKEKGEPSLAL*LFSASRQLRM-VSAWYSWEPCEKFILATFIPVSIIFS 314
L SNA KEKG SL + F+ +R A W P E FIL T I ++ S
Sbjct: 74 LSSNAPVKEKGPSSLFI--FAEDNIIRRNAKAIIEWGPFEYFILLTIIGNCVVLS 126
>AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage
activated calciumchannel alpha-1 subunit protein.
Length = 2027
Score = 31.9 bits (69), Expect = 0.51
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -1
Query: 475 LVSNAMAKEKGEPSLAL*LFSASRQLRM-VSAWYSWEPCEKFILATFIPVSIIFS 314
L SNA KEKG SL + F+ +R A W P E FIL T I ++ S
Sbjct: 74 LSSNAPVKEKGPSSLFI--FAEDNIIRRNAKAIIEWGPFEYFILLTIIGNCVVLS 126
>U49947-2|AAA93421.2| 1032|Caenorhabditis elegans Guanylyl cyclase
protein 11 protein.
Length = 1032
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/71 (25%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Frame = -1
Query: 382 WYSWEPC--EKFILATFIPVSIIFSSTATLRDAGPIVQIIPERRITKTWSQCRDRTYAGA 209
WYS P + + L + ++ + LRD +VQ + R +T G
Sbjct: 246 WYSESPSIVDAYDLGRLLSETVKVHGASLLRDPESLVQTMSGRGVTSLLGYVTKFNTNGV 305
Query: 208 GSRRWRLWAFQ 176
R + LWA Q
Sbjct: 306 SQREYILWAPQ 316
>AF025466-5|AAB71031.2| 428|Caenorhabditis elegans Nematode astacin
protease protein27 protein.
Length = 428
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 306 AVLEKMMETGMNVARMNFSHGSHEYHAETIRNCRE 410
A+ +M T +V+RMN + HE A T+ C++
Sbjct: 233 AMGNRMRATFQDVSRMNVLYNCHERCANTLNRCQQ 267
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,955,084
Number of Sequences: 27780
Number of extensions: 350840
Number of successful extensions: 1029
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1016
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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