Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1389X
         (460 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF513635-1|AAM53607.1|  212|Anopheles gambiae glutathione S-tran...    23   5.1  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    22   9.0  

>AF513635-1|AAM53607.1|  212|Anopheles gambiae glutathione
           S-transferase D4 protein.
          Length = 212

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -1

Query: 328 LVITIPGCQYFQRKV 284
           +V  IPGC  FQR+V
Sbjct: 185 VVAEIPGCAEFQREV 199


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1022

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = -1

Query: 424  AQSTFELSELDYH--CSYKVNVNRSWKNQIPESE 329
            A+   E+ E  Y+  CSY+ N +R  +NQ   S+
Sbjct: 974  AEYVHEVMENQYNLQCSYRGNSDRELQNQEAASQ 1007


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 383,773
Number of Sequences: 2352
Number of extensions: 6824
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39544623
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)