Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1389X
         (460 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138890-1|ABA86496.1|  887|Drosophila melanogaster CG18471 prot...    29   4.0  
AY094676-1|AAM11029.1|  266|Drosophila melanogaster GH04896p pro...    29   4.0  
AF022713-4|AAD09150.2|  777|Drosophila melanogaster putative ser...    29   4.0  
AE013599-2320|AAF57972.2| 1302|Drosophila melanogaster CG18471-P...    29   4.0  
AE013599-963|AAM71039.1|  266|Drosophila melanogaster CG30008-PA...    29   4.0  

>DQ138890-1|ABA86496.1|  887|Drosophila melanogaster CG18471
           protein.
          Length = 887

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = +2

Query: 161 SIHLMSKLLSRISTINTSYKCXYYNKKTKFEIRVTRY 271
           S  L+    S+ S   +S+ C Y ++ T F++ ++RY
Sbjct: 558 SFELVESKWSKSSRGESSFDCPYSSRDTSFDVSISRY 594


>AY094676-1|AAM11029.1|  266|Drosophila melanogaster GH04896p
           protein.
          Length = 266

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +2

Query: 338 WYLILPGSVHIYFIAAVVIQFREFKRRLRCGRREVLHGFI 457
           WY+I    +++YF+      F E+++     R  +LH FI
Sbjct: 23  WYMITVLVLYLYFVTKAGPHFMEWRKPYELKRLILLHNFI 62


>AF022713-4|AAD09150.2|  777|Drosophila melanogaster putative
           serine-enriched protein protein.
          Length = 777

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = +2

Query: 161 SIHLMSKLLSRISTINTSYKCXYYNKKTKFEIRVTRY 271
           S  L+    S+ S   +S+ C Y ++ T F++ ++RY
Sbjct: 442 SFELVESKWSKSSRGESSFDCPYSSRDTSFDVSISRY 478


>AE013599-2320|AAF57972.2| 1302|Drosophila melanogaster CG18471-PA
            protein.
          Length = 1302

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = +2

Query: 161  SIHLMSKLLSRISTINTSYKCXYYNKKTKFEIRVTRY 271
            S  L+    S+ S   +S+ C Y ++ T F++ ++RY
Sbjct: 967  SFELVESKWSKSSRGESSFDCPYSSRDTSFDVSISRY 1003


>AE013599-963|AAM71039.1|  266|Drosophila melanogaster CG30008-PA
           protein.
          Length = 266

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +2

Query: 338 WYLILPGSVHIYFIAAVVIQFREFKRRLRCGRREVLHGFI 457
           WY+I    +++YF+      F E+++     R  +LH FI
Sbjct: 23  WYMITVLVLYLYFVTKAGPHFMEWRKPYELKRLILLHNFI 62


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,748,897
Number of Sequences: 53049
Number of extensions: 254832
Number of successful extensions: 495
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 495
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1518217281
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)