Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1381X
         (514 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    25   0.52 
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    24   0.69 
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    24   0.69 
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    24   0.69 
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    24   0.69 
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    23   2.1  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    23   2.1  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   3.7  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    21   4.9  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   4.9  

>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 24.6 bits (51), Expect = 0.52
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -3

Query: 491 PGQSLARALFQRSFYLLHYSHHVRFTLSVVLLIRNGVF 378
           PGQ       +   YL  Y+ HV  +  VV+ I +G F
Sbjct: 87  PGQDYVIGQ-ENCLYLTIYTTHVNASFDVVVYIHSGAF 123


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 24.2 bits (50), Expect = 0.69
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -3

Query: 491 PGQSLARALFQRSFYLLHYSHHVRFTLSVVLLIRNGVF 378
           PGQ       +   YL  Y+ HV  +  VV+ I  G F
Sbjct: 87  PGQDYVIGQ-ENCLYLTIYTTHVNASFDVVVYIHGGAF 123


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 24.2 bits (50), Expect = 0.69
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -3

Query: 491 PGQSLARALFQRSFYLLHYSHHVRFTLSVVLLIRNGVF 378
           PGQ       +   YL  Y+ HV  +  VV+ I  G F
Sbjct: 87  PGQDYVIGQ-ENCLYLTIYTTHVNASFDVVVYIHGGAF 123


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 24.2 bits (50), Expect = 0.69
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -3

Query: 491 PGQSLARALFQRSFYLLHYSHHVRFTLSVVLLIRNGVF 378
           PGQ       +   YL  Y+ HV  +  VV+ I  G F
Sbjct: 87  PGQDYVIGQ-ENCLYLTIYTTHVNASFDVVVYIHGGAF 123


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 24.2 bits (50), Expect = 0.69
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -3

Query: 491 PGQSLARALFQRSFYLLHYSHHVRFTLSVVLLIRNGVF 378
           PGQ       +   YL  Y+ HV  +  VV+ I  G F
Sbjct: 87  PGQDYVIGQ-ENCLYLTIYTTHVNASFDVVVYIHGGAF 123


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -2

Query: 129 PAAASPGWRSRAAGTSPGYRRGPCELVPH 43
           P+ +SP   S +A TSP  R  P     H
Sbjct: 40  PSGSSPQHSSSSASTSPAARMYPYVSAAH 68


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -2

Query: 129 PAAASPGWRSRAAGTSPGYRRGPCELVPH 43
           P+ +SP   S +A TSP  R  P     H
Sbjct: 40  PSGSSPQHSSSSASTSPAARMYPYVSAAH 68


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
 Frame = -1

Query: 466 YFSEAFTCYITRITFGSHLAS--SY*YVMAFFTASVSTC 356
           YF   FT Y   I +  H AS  ++ Y +A F    STC
Sbjct: 149 YFIYLFTVYY--IYYSVHEASIINFGYTLAKFMIFTSTC 185


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 14/31 (45%), Positives = 15/31 (48%)
 Frame = -2

Query: 174 VSLSAQLQ*ADVGRRPAAASPGWRSRAAGTS 82
           VSLS          RP  AS G R+R A TS
Sbjct: 64  VSLSENRSHEPEMERPKGASNGKRARTAYTS 94


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 14/31 (45%), Positives = 15/31 (48%)
 Frame = -2

Query: 174 VSLSAQLQ*ADVGRRPAAASPGWRSRAAGTS 82
           VSLS          RP  AS G R+R A TS
Sbjct: 84  VSLSENRSHEPEMERPKGASNGKRARTAYTS 114


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,294
Number of Sequences: 336
Number of extensions: 1340
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12258909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)