BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1381X
(514 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_03_0313 - 17590109-17590148,17590254-17590382,17590479-175906... 36 0.025
05_07_0354 - 29507068-29507170,29507406-29507431,29508264-295083... 33 0.18
03_02_0025 + 5084003-5084303,5084449-5084639,5084793-5084873,508... 33 0.18
05_05_0316 + 24035163-24035228,24035524-24035583,24035710-240357... 32 0.31
01_06_0213 + 27580635-27581105,27581206-27581298,27581376-275815... 32 0.31
12_02_0432 + 19008499-19008978,19010830-19011411 31 0.41
12_01_0612 - 5044639-5044858,5045010-5045167,5045440-5045684,504... 31 0.41
10_07_0150 - 13422497-13422575,13423360-13423433,13423948-134241... 31 0.72
06_01_0916 + 7058991-7059050,7060057-7061235,7061778-7063481,706... 31 0.72
03_04_0159 + 17832666-17832938,17833634-17833873 31 0.72
11_01_0442 - 3369827-3370168,3370608-3372616,3372953-3373277,337... 30 0.95
01_02_0049 + 10641363-10641563,10641640-10641750,10641893-106421... 30 0.95
02_01_0325 - 2208480-2208674,2208772-2210609,2210980-2211109,221... 30 1.3
01_06_0836 - 32321431-32321556,32321656-32321872,32321975-323235... 30 1.3
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989... 30 1.3
12_02_0842 - 23588826-23589198,23589548-23590203 29 1.7
08_02_0672 - 19904353-19904839,19905646-19905704,19906137-199063... 29 1.7
05_04_0084 - 17788077-17789240 29 2.2
03_06_0660 - 35349264-35349375,35349914-35350017,35350211-353503... 29 2.2
01_01_0022 - 170045-170095,170406-170554,170764-170875,171398-17... 29 2.2
09_04_0613 + 18953761-18953932,18954672-18954799,18954885-189549... 29 2.9
05_07_0329 - 29308867-29308932,29309040-29309159,29309245-293093... 29 2.9
01_06_1409 - 37111954-37112061,37112295-37112330,37112434-371124... 29 2.9
09_02_0051 - 3606453-3606473,3606562-3606957,3608250-3608419,360... 28 3.8
07_03_1287 + 25510813-25510862,25511326-25511504,25511715-255120... 28 3.8
01_01_0473 - 3478660-3480338,3480507-3480609 28 3.8
02_05_0717 + 31190626-31191234,31191954-31192394,31192699-311928... 28 5.1
01_01_0472 - 3473096-3474288,3474833-3474938 28 5.1
11_06_0185 + 21018045-21022307 27 6.7
06_03_0478 - 21259376-21259465,21259862-21259924,21260025-212600... 27 6.7
05_05_0231 + 23488588-23488689,23488775-23488875,23489012-234891... 27 6.7
01_06_1033 + 33955883-33956374 27 6.7
12_02_0248 + 16413295-16414394,16416511-16416762,16416839-164170... 27 8.8
10_08_0374 - 17312430-17312513,17312794-17313029,17313081-173132... 27 8.8
09_02_0573 - 10804171-10805096,10805188-10805377,10805920-108063... 27 8.8
08_02_0909 - 22515326-22515418,22515992-22516150,22516583-225166... 27 8.8
05_05_0337 - 24176184-24176858 27 8.8
03_05_0371 + 23570246-23570359,23570499-23570575,23570600-235706... 27 8.8
01_01_1165 - 9267891-9268145,9268395-9268510,9268991-9269127,926... 27 8.8
>02_03_0313 -
17590109-17590148,17590254-17590382,17590479-17590612,
17590779-17590841,17590920-17591070,17593372-17593424,
17593483-17593629,17593839-17594163,17594240-17594409,
17595252-17595453,17596065-17596273,17597051-17597260,
17597360-17597489,17599664-17600402,17600411-17600531
Length = 940
Score = 35.5 bits (78), Expect = 0.025
Identities = 18/78 (23%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +3
Query: 3 DENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAE-QREKLR 179
D+ ++ ER RE ++++ + N+ L S EKL + ++ ++++ Q+ K R
Sbjct: 565 DQEYHQLAERKREFQQEIDALETHNERIKGYLNSKKGEKLNELQEKHTQLQSDLQKSKER 624
Query: 180 NHERRAELVRQNKSARTE 233
E+ AEL + + +++
Sbjct: 625 KEEKSAELSKNKELLKSQ 642
>05_07_0354 -
29507068-29507170,29507406-29507431,29508264-29508301,
29508722-29508825,29509005-29509024,29509251-29509299,
29510319-29510406,29510463-29510562,29510660-29510737,
29512688-29512804,29513718-29513821,29514497-29514569,
29514904-29514981,29515091-29515215,29515278-29515341,
29515439-29515597,29515950-29516048,29516496-29516624,
29517010-29517075,29517160-29517304,29517379-29517500,
29517683-29517838,29517918-29518029,29518891-29519036,
29519148-29519252,29519391-29519540,29519703-29519776,
29519902-29520055,29520142-29520408
Length = 1016
Score = 32.7 bits (71), Expect = 0.18
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Frame = +3
Query: 3 DENLKKMIERLREHEEQVRKVRAGNQE--KFQQLESAIQEKLQQAAD--RRLLIEAEQRE 170
DE+LKK+++ R+ E++ K+R +E E QE+ ++ D RR+L + E
Sbjct: 604 DEDLKKLLKEQRQLEDEAAKIRRKKEEITDTMMFEKKRQEETRRRVDIKRRMLETIYKEE 663
Query: 171 KLRNHERR 194
+ + +R+
Sbjct: 664 DMESSKRK 671
>03_02_0025 +
5084003-5084303,5084449-5084639,5084793-5084873,
5084972-5085319,5085409-5086293
Length = 601
Score = 32.7 bits (71), Expect = 0.18
Identities = 16/66 (24%), Positives = 35/66 (53%)
Frame = +3
Query: 36 REHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNHERRAELVRQN 215
+E EE+ R+ R +E+ ++ E + + ++ +RR E E+R++ + ++R E Q
Sbjct: 481 KEREEEERRQREKEEEERRRQEEERKRREEEEKERREREEEERRQREKEEKKRREEEEQR 540
Query: 216 KSARTE 233
+ E
Sbjct: 541 REEEEE 546
Score = 27.9 bits (59), Expect = 5.1
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 15 KKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNHERR 194
K+ ER R+ EE+ R+ + + ++ E Q + ++ R E EQR + ERR
Sbjct: 493 KEEEERRRQEEERKRREEEEKERREREEEERRQREKEEKKRRE---EEEQRREEEEEERR 549
Query: 195 AE 200
E
Sbjct: 550 RE 551
>05_05_0316 +
24035163-24035228,24035524-24035583,24035710-24035787,
24035862-24035913,24036124-24036395,24036508-24036750,
24036849-24036995
Length = 305
Score = 31.9 bits (69), Expect = 0.31
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Frame = +3
Query: 3 DENLKKMIERLREHEEQVRKVRAGNQEKFQQLESA------IQEKLQQAADRRLLIEAEQ 164
D+N++ + RL ++ E RK R + QQLE + ++++LQ+A + ++I
Sbjct: 17 DKNIRMTLRRLAQNREAARKSRLRKKAYVQQLEDSRMKLTQLEQELQRARQQGIIISTSG 76
Query: 165 REKLRNHERRA 197
++ E A
Sbjct: 77 DQQRSTSENEA 87
>01_06_0213 +
27580635-27581105,27581206-27581298,27581376-27581540,
27581640-27581862,27582329-27582429,27582666-27582713,
27583086-27583172,27583745-27583879,27583985-27584140,
27585336-27585545,27585641-27586351,27586429-27586974,
27587872-27588495,27588595-27588699,27590460-27590711,
27590939-27591766
Length = 1584
Score = 31.9 bits (69), Expect = 0.31
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Frame = +3
Query: 3 DENLKKMIER----LREHEEQVRKVRAGNQEKF---QQLESAIQEKLQQAADRRLLIEAE 161
+E ++K +ER R+ EE++ + R QE+F Q+ E EK Q RR +
Sbjct: 190 EEQMRKEMERHDRERRKEEERLLRERQREQERFLREQRREHERMEKFMQKQSRR-AEKQR 248
Query: 162 QREKLRNHERRAELVRQNKSA 224
Q+E+LR + A N+ A
Sbjct: 249 QKEELRKEKEAARQKAANERA 269
>12_02_0432 + 19008499-19008978,19010830-19011411
Length = 353
Score = 31.5 bits (68), Expect = 0.41
Identities = 13/63 (20%), Positives = 36/63 (57%)
Frame = +3
Query: 12 LKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNHER 191
+ +++ +++E +E ++K+ G + + ++ I +++A R ++ Q +KLR +R
Sbjct: 52 IDEILSQMQESDETMQKLLTGLENELREAHRLIVSCQERSAAYRFVMAKRQADKLREAQR 111
Query: 192 RAE 200
R +
Sbjct: 112 RID 114
>12_01_0612 -
5044639-5044858,5045010-5045167,5045440-5045684,
5046006-5046294,5047540-5048561,5049320-5049389
Length = 667
Score = 31.5 bits (68), Expect = 0.41
Identities = 19/73 (26%), Positives = 38/73 (52%)
Frame = +3
Query: 6 ENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNH 185
E +++M + + EQ+ ++R +EK + E +QE+L +A + + E + KLR
Sbjct: 538 ECVEQMEFNAKFYHEQIERLRKDTEEKENEFERLLQEELARAIECDVDSETTENCKLREE 597
Query: 186 ERRAELVRQNKSA 224
+ + + Q K A
Sbjct: 598 QIQRIIDCQVKDA 610
>10_07_0150 -
13422497-13422575,13423360-13423433,13423948-13424160,
13425143-13425214,13425320-13425745
Length = 287
Score = 30.7 bits (66), Expect = 0.72
Identities = 17/26 (65%), Positives = 17/26 (65%)
Frame = -2
Query: 126 AAASPGWRSRAAGTSPGYRRGPCELV 49
AAAS GW RAAGT P R PC LV
Sbjct: 175 AAASSGWLRRAAGTVP---RIPCGLV 197
>06_01_0916 +
7058991-7059050,7060057-7061235,7061778-7063481,
7063557-7064432,7064457-7064660,7065039-7065143,
7065407-7065496,7066066-7066176,7066349-7066780
Length = 1586
Score = 30.7 bits (66), Expect = 0.72
Identities = 19/80 (23%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Frame = +3
Query: 3 DENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRN 182
+E KK + R + H ++R+ K +Q E +E + +RR ++EAE+ ++L
Sbjct: 724 NEENKKFLLRQKLHGSEMRRAEKLLVIKTKQKEDIARE--EAVLERRKILEAEKMQRLAE 781
Query: 183 HERRAE--LVRQNKSARTET 236
+R+ E ++R+ + + +
Sbjct: 782 IQRKKEEAIIRREEERKASS 801
>03_04_0159 + 17832666-17832938,17833634-17833873
Length = 170
Score = 30.7 bits (66), Expect = 0.72
Identities = 16/31 (51%), Positives = 16/31 (51%)
Frame = +2
Query: 47 GTSSQGPRR*PGEVPAARERHPGEAAAGRRP 139
G QGPRR G VPAA G A RRP
Sbjct: 40 GPGDQGPRRRRGVVPAAAAAAGGRALRERRP 70
>11_01_0442 -
3369827-3370168,3370608-3372616,3372953-3373277,
3373386-3373415
Length = 901
Score = 30.3 bits (65), Expect = 0.95
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 3 DENLKKMIERLRE-HEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQRE 170
D+ LK+ + +LR+ EEQ K+R +K Q+L+S E + + +EA + E
Sbjct: 152 DDALKECVRQLRQAREEQEEKIRDAVAKKTQELDSHKSELQNHIYELKQQLEAAKLE 208
>01_02_0049 +
10641363-10641563,10641640-10641750,10641893-10642123,
10642253-10642357,10642546-10642704
Length = 268
Score = 30.3 bits (65), Expect = 0.95
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 6 ENLKKMIE-RLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQ 128
EN KK E R R EE+V+K+ Q+K +QL ++I QQ
Sbjct: 64 ENRKKFAESRARSMEEEVKKLHKCLQDKDEQLRTSICSTEQQ 105
>02_01_0325 -
2208480-2208674,2208772-2210609,2210980-2211109,
2211231-2211270,2211409-2211531,2211940-2212030,
2212396-2212480,2212565-2212720,2212797-2212853,
2212940-2213110,2213313-2213330,2213479-2213551,
2213754-2213839,2214348-2214466,2214542-2214641
Length = 1093
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/77 (19%), Positives = 42/77 (54%)
Frame = +3
Query: 3 DENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRN 182
D+NL+ + L + ++Q+++ + Q+ QQL ++ + + A+ + L + E + ++
Sbjct: 610 DQNLQLQQQLLLQQKQQLQQQQQQQQQNQQQLNKSLGQLVNLASQQSKLFDEELQLQILQ 669
Query: 183 HERRAELVRQNKSARTE 233
++ L+ Q+ S ++
Sbjct: 670 KLQQQSLMSQSTSTLSQ 686
>01_06_0836 -
32321431-32321556,32321656-32321872,32321975-32323590,
32323670-32323753,32323834-32324104,32324294-32324547,
32324709-32324918,32325839-32326024
Length = 987
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +3
Query: 33 LREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNHERRAELVRQ 212
LRE EE+ + +A E + I KL+ A ++ E++E ERR + + +
Sbjct: 630 LREREEEFEQKKAKELEHINSQKEMINTKLEHVAVELQKLKDERKEATLERERREQELSE 689
Query: 213 NK 218
K
Sbjct: 690 IK 691
>01_06_0124 - 26692731-26697046,26698749-26698827,26698899-26698955,
26699321-26699416
Length = 1515
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Frame = +3
Query: 3 DENLKKMIERLREHEEQVRKVRAGNQ---EKFQQLESAIQEKLQQAADRRLLIEAEQREK 173
+ NLK + L + + QV + N+ EK LE ++E + D + ++ E+
Sbjct: 844 EANLKNLESELEQKQSQVSALEQANEELREKISSLERQLEEARSKLQDEIIKLQGEKERA 903
Query: 174 LRN 182
L N
Sbjct: 904 LDN 906
>12_02_0842 - 23588826-23589198,23589548-23590203
Length = 342
Score = 29.5 bits (63), Expect = 1.7
Identities = 22/65 (33%), Positives = 32/65 (49%)
Frame = +3
Query: 18 KMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNHERRA 197
K +E E E R+ A E+F+ A++E+ A +R +EAE REK+ R A
Sbjct: 240 KRVEMQLETERACRRREA--TEEFEAKMRALREEQAAAVER---VEAEYREKMAGLRRDA 294
Query: 198 ELVRQ 212
E Q
Sbjct: 295 EAKEQ 299
>08_02_0672 -
19904353-19904839,19905646-19905704,19906137-19906352,
19906845-19907422,19907506-19908180,19908263-19908653,
19909469-19909621,19909727-19909980,19911023-19911479
Length = 1089
Score = 29.5 bits (63), Expect = 1.7
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Frame = +3
Query: 18 KMIERLREHEEQVRKVRAGNQE--KFQQLESAIQEKLQQAADRRLLIEAE-----QREKL 176
K +ER E E + +VR ++ K++++E +E+L++ R E + +REK
Sbjct: 461 KELER-HERERERERVRRDREKDIKYKEVERLYKERLKEWEFREREKEYQRQHEKEREKD 519
Query: 177 RNHERRAELVRQNKSARTE 233
R ER+ E+++Q + E
Sbjct: 520 RERERKREIMKQEDDSDEE 538
>05_04_0084 - 17788077-17789240
Length = 387
Score = 29.1 bits (62), Expect = 2.2
Identities = 14/56 (25%), Positives = 36/56 (64%)
Frame = +3
Query: 6 ENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREK 173
E++KK +R ++H EQ ++ + ++ ++ +S E +++ A+++ + + E+REK
Sbjct: 315 ESMKKDKKRQQKHAEQWKERQKMVDKQKKERQSKRTENIRERANQKKMRKIEKREK 370
>03_06_0660 -
35349264-35349375,35349914-35350017,35350211-35350368,
35350899-35350986,35352927-35353025,35353377-35353472,
35353591-35353628,35357960-35358285,35358600-35358796
Length = 405
Score = 29.1 bits (62), Expect = 2.2
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -2
Query: 201 ARRAAHGCVVSLSAQLQ*ADVGRRPAAASPGWRSRAAGTSPGYRRG 64
AR+A +S S + + A+ RR A P W + AA T+ G +RG
Sbjct: 119 ARKANQDATMSGSTEARCAEA-RRVEATGPKWEASAAVTTLGAKRG 163
>01_01_0022 -
170045-170095,170406-170554,170764-170875,171398-171469,
171578-171671,171770-171921,172004-172072
Length = 232
Score = 29.1 bits (62), Expect = 2.2
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 3 DENLKKMIERLREHEEQVRKVRAG 74
D+ +KK+ E L ++EQ+RK R G
Sbjct: 32 DDKIKKLDEELGRYKEQIRKTRPG 55
>09_04_0613 +
18953761-18953932,18954672-18954799,18954885-18954956,
18955033-18955146,18955547-18955615,18955691-18955747,
18956262-18956315,18956387-18956449,18956543-18956605,
18956803-18956967,18957111-18957266,18957315-18957416
Length = 404
Score = 28.7 bits (61), Expect = 2.9
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +3
Query: 6 ENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAAD--RRLLIEAEQREKLR 179
E LKK IE + V + RAG+ +K Q +A EKLQ+ +D +R + + E K+
Sbjct: 126 EKLKKDIEAQNSKKSTV-EARAGDADKKVQELNAKLEKLQKTSDEQKRRIQKTEHALKVA 184
Query: 180 NHE 188
E
Sbjct: 185 EEE 187
>05_07_0329 -
29308867-29308932,29309040-29309159,29309245-29309364,
29309566-29310123,29310199-29310258,29310839-29310904,
29310993-29311103,29311167-29311257,29311349-29311449,
29311534-29311641,29311737-29314205
Length = 1289
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +3
Query: 78 QEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNHERRAELVRQNKSAR 227
QE + + A +E+ ++ + RL E E+R K ER+AE ++ K R
Sbjct: 429 QEALARRQEA-EERKKREEEERLRKEEEERLKKEEEERKAEEAKRRKKER 477
>01_06_1409 -
37111954-37112061,37112295-37112330,37112434-37112498,
37112610-37112688,37112967-37113041,37113623-37114147
Length = 295
Score = 28.7 bits (61), Expect = 2.9
Identities = 18/75 (24%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +3
Query: 12 LKKMIERLREHEE-QVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNHE 188
L + ++L +H+ Q ++ + Q+K QQ + Q+KLQQ + +Q++KL+ +
Sbjct: 39 LTQQQQKLPQHQHLQQQQQQQQQQQKLQQQQQQQQQKLQQQ-------QQQQQQKLQQQQ 91
Query: 189 RRAELVRQNKSARTE 233
++ + Q+ S +++
Sbjct: 92 QQQQNQPQHSSQQSQ 106
Score = 27.5 bits (58), Expect = 6.7
Identities = 15/70 (21%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = +3
Query: 27 ERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRR--LLIEAEQREKLRNHERRAE 200
++ ++ ++++++ + Q+K QQ + Q+KLQQ ++ + Q+ + R +
Sbjct: 56 QQQQQQQQKLQQQQQQQQQKLQQQQQQQQQKLQQQQQQQQNQPQHSSQQSQQTTTLRNQQ 115
Query: 201 LVRQNKSART 230
+ Q ++ART
Sbjct: 116 QISQQQTART 125
>09_02_0051 -
3606453-3606473,3606562-3606957,3608250-3608419,
3609654-3610707
Length = 546
Score = 28.3 bits (60), Expect = 3.8
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 7/57 (12%)
Frame = +3
Query: 3 DENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAI-------QEKLQQAADRRLLI 152
+++LKK + L+ EE+ + A +++ +Q E+ + EKLQQ D L +
Sbjct: 51 EQSLKKKFDDLKRQEEEFEETVAKSEQMLEQQEAVVVAKELTSLEKLQQKRDAALAV 107
>07_03_1287 +
25510813-25510862,25511326-25511504,25511715-25512037,
25512160-25513950
Length = 780
Score = 28.3 bits (60), Expect = 3.8
Identities = 16/63 (25%), Positives = 31/63 (49%)
Frame = +3
Query: 12 LKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNHER 191
L+ + R ++ E V+ QE+ +L +QE Q+A D +++ + Q E++R
Sbjct: 509 LEAELNRTKQEIEYVKSKEEDAQERMVELPRILQEAAQEAEDAKMVAFSVQ-EQVRKARE 567
Query: 192 RAE 200
E
Sbjct: 568 ETE 570
>01_01_0473 - 3478660-3480338,3480507-3480609
Length = 593
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 3 DENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAI 110
D N KKM+E EQVRK G++ + +L++ I
Sbjct: 338 DSNEKKMLEERAIEFEQVRKELEGSRTEVAELQATI 373
>02_05_0717 +
31190626-31191234,31191954-31192394,31192699-31192802,
31193000-31194384,31194508-31194548,31195065-31195133,
31195335-31195435,31195747-31195825,31195939-31196037,
31196119-31196187,31197609-31197658,31197749-31197925,
31198045-31198152,31198224-31198290
Length = 1132
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +3
Query: 27 ERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNHE 188
ER R EE+ + R+ +E +++ + +E + R EAE+R+++R E
Sbjct: 98 ERRRSQEEEWERRRSQEEEAVREMRRSQEEDEVEERVIRESSEAEERKRVREKE 151
>01_01_0472 - 3473096-3474288,3474833-3474938
Length = 432
Score = 27.9 bits (59), Expect = 5.1
Identities = 22/70 (31%), Positives = 36/70 (51%)
Frame = +3
Query: 12 LKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNHER 191
L++ IE +R E+V + + + KF+QLE A E + + E EK R HE
Sbjct: 328 LQETIESIRIKLEEVSEEKLLVENKFKQLEEANSEAEKYNQELSHATEKLSEEKFR-HE- 385
Query: 192 RAELVRQNKS 221
AE++ N++
Sbjct: 386 -AEILALNQA 394
>11_06_0185 + 21018045-21022307
Length = 1420
Score = 27.5 bits (58), Expect = 6.7
Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +3
Query: 3 DENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRN 182
DE KK+ E+ EE + G + K + + + + +RR + + E+R++ +
Sbjct: 418 DEKTKKLNEQTGVEEETAVRQGGGGERKEDEKDERGDGEEEGKEERRDMEKGEERKEQQQ 477
Query: 183 HERRAELVRQNKS-ARTET 236
E+ E ++ ++ R ET
Sbjct: 478 EEQEKEGRKEEQNEVRKET 496
>06_03_0478 -
21259376-21259465,21259862-21259924,21260025-21260066,
21260180-21260461,21261084-21261587,21261973-21261981,
21262122-21262196,21262375-21262449,21262557-21263494,
21263577-21263607,21263694-21263979,21264691-21264905,
21265329-21265437,21265556-21265611,21265730-21265822,
21266348-21266393,21266496-21267221,21267489-21267550,
21267738-21268013,21268604-21268735,21268835-21268909
Length = 1394
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 81 EKFQQLESAIQEKLQQAADRRLLIEAEQ-REKLRNHERRAELVRQNKSAR 227
E+ ++ + + +L+ DR E E+ RE+LR ER EL R+ + R
Sbjct: 321 EREKERDRERERELRDLRDRERERERERDRERLRERERERELERERERLR 370
>05_05_0231 +
23488588-23488689,23488775-23488875,23489012-23489168,
23489365-23489594,23489696-23489795,23489878-23489916
Length = 242
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/57 (24%), Positives = 34/57 (59%)
Frame = +3
Query: 36 REHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNHERRAELV 206
++ ++ VR + +EK ++ A +E+ ++ L+E+E+R +++ER+A+ V
Sbjct: 8 KQIQQMVRFILQEAEEKASEISVAAEEEFN--IEKLQLVESEKRRIRQDYERKAKQV 62
>01_06_1033 + 33955883-33956374
Length = 163
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Frame = +3
Query: 6 ENLKKMIERLREH----EEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIE 155
E ++K E+ + H EE+V+K+R NQ+ ++L+ I + + R LL +
Sbjct: 23 EAVRKYREKKKAHAAFLEEEVKKLRTTNQQLLRRLQGHISLEAEVVRLRALLFD 76
>12_02_0248 +
16413295-16414394,16416511-16416762,16416839-16417055,
16417216-16417353,16417493-16417669,16417744-16417851,
16417925-16418392,16418493-16418570,16418673-16418756
Length = 873
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 27 ERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKL 176
ER E+ R+ + QEK ++ E +EK Q +R L + + EK+
Sbjct: 757 EREEREREKERERQEWEQEKERECEERAREKEQDRKERELERKERELEKI 806
>10_08_0374 -
17312430-17312513,17312794-17313029,17313081-17313261,
17313335-17313445,17313495-17313722,17313862-17313999,
17314159-17314375,17314452-17314564,17314919-17314921
Length = 436
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 27 ERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKL 176
ER E+ R+ + QEK ++ E +EK Q +R L + + EK+
Sbjct: 346 EREEREREKERERQEREQEKERECEERAREKEQDRKERELERKERELEKI 395
>09_02_0573 -
10804171-10805096,10805188-10805377,10805920-10806363,
10806689-10807552,10809269-10809802
Length = 985
Score = 27.1 bits (57), Expect = 8.8
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 6 ENLKKMIER-LREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAAD 137
ENL+K I+ LR E V G KF+ ++A QE +QQ +
Sbjct: 746 ENLEKKIKTGLRNVESAQADVTDGLDIKFELCQTACQEGIQQLCE 790
>08_02_0909 -
22515326-22515418,22515992-22516150,22516583-22516658,
22517980-22518141,22518826-22519259,22519723-22521414
Length = 871
Score = 27.1 bits (57), Expect = 8.8
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = -2
Query: 195 RAAHGCVVSLSAQLQ*ADVGRRPAAASPGWRSRAAGTSPGYRRGPCELVP 46
R A G V S A PAA + G S + S G R+G + +P
Sbjct: 47 RLASGAVASGVASPTTTPASSAPAAGADGASSGSGSASSGRRKGRAQAIP 96
>05_05_0337 - 24176184-24176858
Length = 224
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Frame = +3
Query: 6 ENLKKMIERLREH----EEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIE 155
E ++K E+ + H EE+V+K+RA NQ+ ++L+ + + R +L++
Sbjct: 81 EAVRKYREKKKAHAAFLEEEVKKLRAANQQLLKRLQGHAALEAEVIRLRSILLD 134
>03_05_0371 +
23570246-23570359,23570499-23570575,23570600-23570675,
23570761-23570892,23570945-23571412,23571513-23571590,
23571693-23571809
Length = 353
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 27 ERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKL 176
ER E+ R+ + QEK ++ E +EK Q +R L + + EK+
Sbjct: 226 EREEREREKERERQEREQEKERECEERAREKEQDRKERELERKERELEKI 275
>01_01_1165 -
9267891-9268145,9268395-9268510,9268991-9269127,
9269645-9269808,9269892-9269972,9270783-9270962,
9271489-9271929,9273234-9273344,9274355-9274463,
9274618-9274643,9274823-9274903,9275013-9275211,
9275374-9275449,9275553-9275769,9276117-9276155,
9276684-9276783,9276962-9277084,9277171-9277895
Length = 1059
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 144 DVGRRPAAASPGWRSRAAGTSPGYRR 67
D G R A SP WR RAA RR
Sbjct: 700 DAGPRKVAGSPQWRRRAARCGARARR 725
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,595,962
Number of Sequences: 37544
Number of extensions: 169172
Number of successful extensions: 773
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 771
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1106928780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -