Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1381X
         (514 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    31   0.017
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    29   0.092
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    29   0.12 
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    28   0.16 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   0.28 
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    25   2.0  
AY390605-1|AAR27302.1|  241|Anopheles gambiae SP22D protein.           23   4.6  
AY390604-1|AAR27301.1|  241|Anopheles gambiae SP22D protein.           23   4.6  
AY390603-1|AAR27300.1|  241|Anopheles gambiae SP22D protein.           23   4.6  
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22...    23   4.6  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   8.0  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   8.0  

>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 31.5 bits (68), Expect = 0.017
 Identities = 19/62 (30%), Positives = 35/62 (56%)
 Frame = +3

Query: 33  LREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNHERRAELVRQ 212
           L++ ++Q R+ +       QQ +   Q+  QQ   R    +A++RE+LRN +RR   +RQ
Sbjct: 72  LQQQQQQQRQPQRQAVVGTQQQQQRRQQ--QQHQQRSNATQAQRREQLRNEQRRPARLRQ 129

Query: 213 NK 218
           ++
Sbjct: 130 DQ 131


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 29.1 bits (62), Expect = 0.092
 Identities = 17/74 (22%), Positives = 37/74 (50%)
 Frame = +3

Query: 6   ENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNH 185
           E L+  I+RL E    +++  A   E+   +   +QE+ ++A  R   +EA+  +    H
Sbjct: 118 ELLRATIQRLEEQNCAMKEQNAKLLEQITGMCQLLQEEKEEAKRREEKLEAQMEKLAAAH 177

Query: 186 ERRAELVRQNKSAR 227
           +R  +++    +A+
Sbjct: 178 QRDRDVLNSLLAAK 191


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 28.7 bits (61), Expect = 0.12
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
 Frame = +3

Query: 21  MIERLREHEEQVRKVRAGNQEKFQQLESA--IQEKLQQAADRRLLIEAEQREKLR-NHER 191
           M E +R+    + +  A N+   ++L     +  K Q+  +RR LI  E+ EK+R  HER
Sbjct: 1   MREAIRQLTNSLAEANARNERINEELTQMRILMTKQQEYTERRELIAREEMEKMRAAHER 60


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 28.3 bits (60), Expect = 0.16
 Identities = 16/74 (21%), Positives = 37/74 (50%)
 Frame = +3

Query: 6   ENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNH 185
           E LK  I++L E   ++++      E+  ++   +QE+ ++A  R   ++A+  +    H
Sbjct: 94  ELLKATIQQLEEQNLEMKEQNFRLAEQITRMCQLLQEEKEEAKRREEKLKAQMEKLAAAH 153

Query: 186 ERRAELVRQNKSAR 227
           +R   L+    +A+
Sbjct: 154 QRDRNLLNSLLAAK 167


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.5 bits (58), Expect = 0.28
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = +2

Query: 329 AHQHQQSDLTR*HRCREKRHYVSIGRR*V*TERDASNVASKSFAEIKLL 475
           AHQ QQ    + H      H    G     +E+D+S  +SKS   +K+L
Sbjct: 148 AHQQQQQQQQQLHHHHHHHHNAPAGGESSTSEKDSSRESSKSPMLMKML 196


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 15/58 (25%), Positives = 32/58 (55%)
 Frame = +3

Query: 6   ENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLR 179
           +NL++  ++    +EQ+ ++R   +EK ++     Q + ++A  R    +A+  EKLR
Sbjct: 43  QNLEETRKKNESLQEQLTQLRWLMEEKLREQREDAQRREEEARRREEAAKAD-NEKLR 99


>AY390605-1|AAR27302.1|  241|Anopheles gambiae SP22D protein.
          Length = 241

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 200 AGPAEQERPHRDRGPA 247
           AGP +Q++ H+  GP+
Sbjct: 19  AGPQQQQQQHQQHGPS 34


>AY390604-1|AAR27301.1|  241|Anopheles gambiae SP22D protein.
          Length = 241

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 200 AGPAEQERPHRDRGPA 247
           AGP +Q++ H+  GP+
Sbjct: 19  AGPQQQQQQHQQHGPS 34


>AY390603-1|AAR27300.1|  241|Anopheles gambiae SP22D protein.
          Length = 241

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 200 AGPAEQERPHRDRGPA 247
           AGP +Q++ H+  GP+
Sbjct: 19  AGPQQQQQQHQQHGPS 34


>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
           protein.
          Length = 1322

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 200 AGPAEQERPHRDRGPA 247
           AGP +Q++ H+  GP+
Sbjct: 90  AGPQQQQQQHQQHGPS 105


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 22.6 bits (46), Expect = 8.0
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = +3

Query: 9    NLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAAD 137
            ++KK I  L++ E + +  R     +F+Q+   I+ KLQ+  D
Sbjct: 988  SIKKEIVALQKREAEGKMKRL----EFEQILQTIETKLQETKD 1026


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 22.6 bits (46), Expect = 8.0
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -2

Query: 102 SRAAGTSPGYRRGP 61
           S   GTSP YRR P
Sbjct: 16  SEGTGTSPSYRRLP 29


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 393,874
Number of Sequences: 2352
Number of extensions: 5128
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46514490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)