Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1378
         (571 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    23   2.4  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    23   2.4  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   2.4  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    22   4.2  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   7.4  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   7.4  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   9.8  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 521 CTNSGFLKGGNVRTCEIRG 465
           CT + +    NVR CE+ G
Sbjct: 152 CTVNNYQDASNVRNCELVG 170


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 521 CTNSGFLKGGNVRTCEIRG 465
           CT + +    NVR CE+ G
Sbjct: 153 CTVNNYQDASNVRNCELVG 171


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 521 CTNSGFLKGGNVRTCEIRG 465
           CT + +    NVR CE+ G
Sbjct: 153 CTVNNYQDASNVRNCELVG 171


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 6/16 (37%), Positives = 12/16 (75%), Gaps = 1/16 (6%)
 Frame = -2

Query: 468 WTLMVWIGIIS-VYSC 424
           W  ++W+GI+S ++ C
Sbjct: 157 WLFILWVGILSTIFLC 172


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +3

Query: 240 YIIVRFNSRFSRIPSTFTNIS 302
           YII      F +IP T TNI+
Sbjct: 267 YIIFDLLQVFGQIPGTQTNIA 287


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 408 VSNTAFTRLIFLKNC 364
           +SN +   LIFL NC
Sbjct: 237 ISNISLVSLIFLFNC 251


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2

Query: 99  LVRAPSTSSAFIPS 58
           LV APS S A +PS
Sbjct: 190 LVNAPSVSPASLPS 203


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,940
Number of Sequences: 336
Number of extensions: 2961
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)