Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1376
         (830 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL...    25   2.1  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    24   4.9  
AY146728-1|AAO12088.1|  131|Anopheles gambiae odorant-binding pr...    23   8.6  

>Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL10
           protein.
          Length = 204

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +3

Query: 753 KPKSYGIAKIIPSECLQ 803
           KPKS+G+ ++ P  CLQ
Sbjct: 83  KPKSHGVNQLKPYRCLQ 99


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = -3

Query: 591 CSRPTRLATCSLSPKAISSV*SNDT*HLACSGPT 490
           C        C L P+ I +V SN   H +C G T
Sbjct: 35  CDATFHRGCCKLPPELIDAVLSNVDLHWSCIGCT 68


>AY146728-1|AAO12088.1|  131|Anopheles gambiae odorant-binding
           protein AgamOBP21 protein.
          Length = 131

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 8/26 (30%), Positives = 17/26 (65%)
 Frame = +1

Query: 724 IWKNSSGKTSSPRAMELLKLYHQSVS 801
           + +N+ G+T+  +A  L + YH++ S
Sbjct: 103 VCENNEGETACDKAFSLYQCYHKNKS 128


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 868,964
Number of Sequences: 2352
Number of extensions: 17433
Number of successful extensions: 29
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 87651612
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)