Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1375
(831 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D89976-1|BAA21762.1| 592|Homo sapiens 5-aminoimidazole-4-carbox... 93 1e-18
D82348-1|BAA11559.1| 592|Homo sapiens 5-aminoimidazole-4-carbox... 93 1e-18
BC008879-1|AAH08879.1| 592|Homo sapiens 5-aminoimidazole-4-carb... 93 1e-18
AC073284-1|AAY24062.1| 592|Homo sapiens unknown protein. 93 1e-18
AB062403-1|BAB93490.1| 592|Homo sapiens 5-aminoimidazole-4-carb... 93 1e-18
U37436-1|AAA97405.1| 591|Homo sapiens AICAR formyltransferase/I... 91 5e-18
BC105638-1|AAI05639.1| 352|Homo sapiens TTLL3 protein protein. 31 6.8
BC099735-1|AAH99735.1| 352|Homo sapiens TTLL3 protein protein. 31 6.8
BC098361-1|AAH98361.1| 352|Homo sapiens TTLL3 protein protein. 31 6.8
AL096725-1|CAB46375.1| 352|Homo sapiens hypothetical protein pr... 31 6.8
AF078842-1|AAF23353.1| 292|Homo sapiens HOTTL protein protein. 31 6.8
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ... 30 8.9
>D89976-1|BAA21762.1| 592|Homo sapiens
5-aminoimidazole-4-carboxamide ribonucleotide
transformylase protein.
Length = 592
Score = 93.1 bits (221), Expect = 1e-18
Identities = 45/65 (69%), Positives = 55/65 (84%)
Frame = +1
Query: 313 GKLALLSVSDKTGLLSLAKSLSECGLQLIASGGTATALRNAGLTVQDVSDITRAPEMLGG 492
G+LAL SVSDKTGL+ A++L+ GL L+ASGGTA ALR+AGL V+DVS++T PEMLGG
Sbjct: 4 GQLALFSVSDKTGLVEFARNLTALGLNLVASGGTAKALRDAGLAVRDVSELTGFPEMLGG 63
Query: 493 RVKTL 507
RVKTL
Sbjct: 64 RVKTL 68
Score = 91.1 bits (216), Expect = 5e-18
Identities = 44/65 (67%), Positives = 49/65 (75%)
Frame = +3
Query: 510 PAVHAGILARLSDSDQEDMKRQKYEMISVVVCNLYPFVQTVSKPDVTVADAVENIDIGGV 689
PAVHAGILAR D DM R + +I VV CNLYPFV+TV+ P VTV +AVE IDIGGV
Sbjct: 70 PAVHAGILARNIPEDNADMARLDFNLIRVVACNLYPFVKTVASPGVTVEEAVEQIDIGGV 129
Query: 690 TLLRA 704
TLLRA
Sbjct: 130 TLLRA 134
Score = 33.9 bits (74), Expect = 0.73
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +2
Query: 710 KNHDRVTVVCDPADYDAVS 766
KNH RVTVVC+P DY VS
Sbjct: 137 KNHARVTVVCEPEDYVVVS 155
>D82348-1|BAA11559.1| 592|Homo sapiens
5-aminoimidazole-4-carboxamide-1-beta-D-ribonucl eotide
transformylase/inosinic protein.
Length = 592
Score = 93.1 bits (221), Expect = 1e-18
Identities = 45/65 (69%), Positives = 55/65 (84%)
Frame = +1
Query: 313 GKLALLSVSDKTGLLSLAKSLSECGLQLIASGGTATALRNAGLTVQDVSDITRAPEMLGG 492
G+LAL SVSDKTGL+ A++L+ GL L+ASGGTA ALR+AGL V+DVS++T PEMLGG
Sbjct: 4 GQLALFSVSDKTGLVEFARNLTALGLNLVASGGTAKALRDAGLAVRDVSELTGFPEMLGG 63
Query: 493 RVKTL 507
RVKTL
Sbjct: 64 RVKTL 68
Score = 91.1 bits (216), Expect = 5e-18
Identities = 44/65 (67%), Positives = 49/65 (75%)
Frame = +3
Query: 510 PAVHAGILARLSDSDQEDMKRQKYEMISVVVCNLYPFVQTVSKPDVTVADAVENIDIGGV 689
PAVHAGILAR D DM R + +I VV CNLYPFV+TV+ P VTV +AVE IDIGGV
Sbjct: 70 PAVHAGILARNIPEDNADMARLDFNLIRVVACNLYPFVKTVASPGVTVEEAVEQIDIGGV 129
Query: 690 TLLRA 704
TLLRA
Sbjct: 130 TLLRA 134
Score = 33.9 bits (74), Expect = 0.73
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +2
Query: 710 KNHDRVTVVCDPADYDAVS 766
KNH RVTVVC+P DY VS
Sbjct: 137 KNHARVTVVCEPEDYVVVS 155
>BC008879-1|AAH08879.1| 592|Homo sapiens
5-aminoimidazole-4-carboxamide ribonucleotide
formyltransferase/IMP cyclohydrol protein.
Length = 592
Score = 93.1 bits (221), Expect = 1e-18
Identities = 45/65 (69%), Positives = 55/65 (84%)
Frame = +1
Query: 313 GKLALLSVSDKTGLLSLAKSLSECGLQLIASGGTATALRNAGLTVQDVSDITRAPEMLGG 492
G+LAL SVSDKTGL+ A++L+ GL L+ASGGTA ALR+AGL V+DVS++T PEMLGG
Sbjct: 4 GQLALFSVSDKTGLVEFARNLTALGLNLVASGGTAKALRDAGLAVRDVSELTGFPEMLGG 63
Query: 493 RVKTL 507
RVKTL
Sbjct: 64 RVKTL 68
Score = 91.1 bits (216), Expect = 5e-18
Identities = 44/65 (67%), Positives = 49/65 (75%)
Frame = +3
Query: 510 PAVHAGILARLSDSDQEDMKRQKYEMISVVVCNLYPFVQTVSKPDVTVADAVENIDIGGV 689
PAVHAGILAR D DM R + +I VV CNLYPFV+TV+ P VTV +AVE IDIGGV
Sbjct: 70 PAVHAGILARNIPEDNADMARLDFNLIRVVACNLYPFVKTVASPGVTVEEAVEQIDIGGV 129
Query: 690 TLLRA 704
TLLRA
Sbjct: 130 TLLRA 134
Score = 33.9 bits (74), Expect = 0.73
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +2
Query: 710 KNHDRVTVVCDPADYDAVS 766
KNH RVTVVC+P DY VS
Sbjct: 137 KNHARVTVVCEPEDYVVVS 155
>AC073284-1|AAY24062.1| 592|Homo sapiens unknown protein.
Length = 592
Score = 93.1 bits (221), Expect = 1e-18
Identities = 45/65 (69%), Positives = 55/65 (84%)
Frame = +1
Query: 313 GKLALLSVSDKTGLLSLAKSLSECGLQLIASGGTATALRNAGLTVQDVSDITRAPEMLGG 492
G+LAL SVSDKTGL+ A++L+ GL L+ASGGTA ALR+AGL V+DVS++T PEMLGG
Sbjct: 4 GQLALFSVSDKTGLVEFARNLTALGLNLVASGGTAKALRDAGLAVRDVSELTGFPEMLGG 63
Query: 493 RVKTL 507
RVKTL
Sbjct: 64 RVKTL 68
Score = 91.1 bits (216), Expect = 5e-18
Identities = 44/65 (67%), Positives = 49/65 (75%)
Frame = +3
Query: 510 PAVHAGILARLSDSDQEDMKRQKYEMISVVVCNLYPFVQTVSKPDVTVADAVENIDIGGV 689
PAVHAGILAR D DM R + +I VV CNLYPFV+TV+ P VTV +AVE IDIGGV
Sbjct: 70 PAVHAGILARNIPEDNADMARLDFNLIRVVACNLYPFVKTVASPGVTVEEAVEQIDIGGV 129
Query: 690 TLLRA 704
TLLRA
Sbjct: 130 TLLRA 134
Score = 33.9 bits (74), Expect = 0.73
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +2
Query: 710 KNHDRVTVVCDPADYDAVS 766
KNH RVTVVC+P DY VS
Sbjct: 137 KNHARVTVVCEPEDYVVVS 155
>AB062403-1|BAB93490.1| 592|Homo sapiens
5-aminoimidazole-4-carboxamide-1-bata-D-ribonucl eotid
transformylase/inosinica protein.
Length = 592
Score = 93.1 bits (221), Expect = 1e-18
Identities = 45/65 (69%), Positives = 55/65 (84%)
Frame = +1
Query: 313 GKLALLSVSDKTGLLSLAKSLSECGLQLIASGGTATALRNAGLTVQDVSDITRAPEMLGG 492
G+LAL SVSDKTGL+ A++L+ GL L+ASGGTA ALR+AGL V+DVS++T PEMLGG
Sbjct: 4 GQLALFSVSDKTGLVEFARNLTALGLNLVASGGTAKALRDAGLAVRDVSELTGFPEMLGG 63
Query: 493 RVKTL 507
RVKTL
Sbjct: 64 RVKTL 68
Score = 91.1 bits (216), Expect = 5e-18
Identities = 44/65 (67%), Positives = 49/65 (75%)
Frame = +3
Query: 510 PAVHAGILARLSDSDQEDMKRQKYEMISVVVCNLYPFVQTVSKPDVTVADAVENIDIGGV 689
PAVHAGILAR D DM R + +I VV CNLYPFV+TV+ P VTV +AVE IDIGGV
Sbjct: 70 PAVHAGILARNIPEDNADMARLDFNLIRVVACNLYPFVKTVASPGVTVEEAVEQIDIGGV 129
Query: 690 TLLRA 704
TLLRA
Sbjct: 130 TLLRA 134
Score = 33.9 bits (74), Expect = 0.73
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +2
Query: 710 KNHDRVTVVCDPADYDAVS 766
KNH RVTVVC+P DY VS
Sbjct: 137 KNHARVTVVCEPEDYVVVS 155
>U37436-1|AAA97405.1| 591|Homo sapiens AICAR formyltransferase/IMP
cyclohydrolase bifunctional enzyme protein.
Length = 591
Score = 91.1 bits (216), Expect = 5e-18
Identities = 44/65 (67%), Positives = 49/65 (75%)
Frame = +3
Query: 510 PAVHAGILARLSDSDQEDMKRQKYEMISVVVCNLYPFVQTVSKPDVTVADAVENIDIGGV 689
PAVHAGILAR D DM R + +I VV CNLYPFV+TV+ P VTV +AVE IDIGGV
Sbjct: 69 PAVHAGILARNIPEDNADMARLDFNLIRVVACNLYPFVKTVASPGVTVEEAVEQIDIGGV 128
Query: 690 TLLRA 704
TLLRA
Sbjct: 129 TLLRA 133
Score = 88.6 bits (210), Expect = 2e-17
Identities = 43/62 (69%), Positives = 52/62 (83%)
Frame = +1
Query: 322 ALLSVSDKTGLLSLAKSLSECGLQLIASGGTATALRNAGLTVQDVSDITRAPEMLGGRVK 501
AL SVSDKTGL+ A++L+ GL L+ASGGTA ALR+AGL V+DVS++T PEMLGGRVK
Sbjct: 6 ALFSVSDKTGLVEFARNLTALGLNLVASGGTAKALRDAGLAVRDVSELTGFPEMLGGRVK 65
Query: 502 TL 507
TL
Sbjct: 66 TL 67
Score = 33.9 bits (74), Expect = 0.73
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +2
Query: 710 KNHDRVTVVCDPADYDAVS 766
KNH RVTVVC+P DY VS
Sbjct: 136 KNHARVTVVCEPEDYVVVS 154
>BC105638-1|AAI05639.1| 352|Homo sapiens TTLL3 protein protein.
Length = 352
Score = 30.7 bits (66), Expect = 6.8
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 669 NIDIGGVTLLRAEPRTTTGSPSSVTRPTTMLCQRNQREQTSSDD 800
N D G L+ +P TT SP+S RP+ +L + SSDD
Sbjct: 294 NCDTGAFELIYKQPVTT--SPASTPRPSCLLPMYSDTRARSSDD 335
>BC099735-1|AAH99735.1| 352|Homo sapiens TTLL3 protein protein.
Length = 352
Score = 30.7 bits (66), Expect = 6.8
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 669 NIDIGGVTLLRAEPRTTTGSPSSVTRPTTMLCQRNQREQTSSDD 800
N D G L+ +P TT SP+S RP+ +L + SSDD
Sbjct: 294 NCDTGAFELIYKQPVTT--SPASTPRPSCLLPMYSDTRARSSDD 335
>BC098361-1|AAH98361.1| 352|Homo sapiens TTLL3 protein protein.
Length = 352
Score = 30.7 bits (66), Expect = 6.8
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 669 NIDIGGVTLLRAEPRTTTGSPSSVTRPTTMLCQRNQREQTSSDD 800
N D G L+ +P TT SP+S RP+ +L + SSDD
Sbjct: 294 NCDTGAFELIYKQPVTT--SPASTPRPSCLLPMYSDTRARSSDD 335
>AL096725-1|CAB46375.1| 352|Homo sapiens hypothetical protein
protein.
Length = 352
Score = 30.7 bits (66), Expect = 6.8
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 669 NIDIGGVTLLRAEPRTTTGSPSSVTRPTTMLCQRNQREQTSSDD 800
N D G L+ +P TT SP+S RP+ +L + SSDD
Sbjct: 294 NCDTGAFELIYKQPVTT--SPASTPRPSCLLPMYSDTRARSSDD 335
>AF078842-1|AAF23353.1| 292|Homo sapiens HOTTL protein protein.
Length = 292
Score = 30.7 bits (66), Expect = 6.8
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 669 NIDIGGVTLLRAEPRTTTGSPSSVTRPTTMLCQRNQREQTSSDD 800
N D G L+ +P TT SP+S RP+ +L + SSDD
Sbjct: 234 NCDTGAFELIYKQPVTT--SPASTPRPSCLLPMYSDTRARSSDD 275
>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
marker CA125 protein.
Length = 22152
Score = 30.3 bits (65), Expect = 8.9
Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Frame = +3
Query: 246 PPVTQVQVSYTVVLEQTEHGVKWKTSSSQRF-RQDGSTLVSKEPVGM-WPA 392
PP + + ++TV + T + V+ ++ +QRF + +TLVS+ P M WP+
Sbjct: 8208 PPGSTPESTHTVDISTTPNWVETHSTVTQRFSHSEMTTLVSRSPGDMLWPS 8258
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,064,664
Number of Sequences: 237096
Number of extensions: 2052158
Number of successful extensions: 12143
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 11875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12142
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10426655866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -