Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1375
         (831 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT030439-1|ABO52859.1|  590|Drosophila melanogaster LD10347p pro...   107   2e-23
BT011462-1|AAR99120.1|  590|Drosophila melanogaster RE29555p pro...   107   2e-23
AE014297-3662|AAF56358.1|  590|Drosophila melanogaster CG11089-P...   107   2e-23
AY061343-1|AAL28891.1|  178|Drosophila melanogaster LD27358p pro...    31   1.5  
AE013599-3195|AAF46720.1|  178|Drosophila melanogaster CG10795-P...    31   1.5  
D17550-1|BAA04488.1| 1235|Drosophila melanogaster tyrosine kinas...    31   1.9  
AE014296-868|AAF47916.2| 1233|Drosophila melanogaster CG7525-PA ...    31   1.9  
AY075264-1|AAL68131.1|  494|Drosophila melanogaster AT23209p pro...    30   3.4  
AE014297-4557|AAN14223.1|  494|Drosophila melanogaster CG15530-P...    30   3.4  
AE014297-4556|AAF57018.2|  494|Drosophila melanogaster CG15530-P...    30   3.4  
AE014296-571|AAF47722.1|  556|Drosophila melanogaster CG14956-PA...    29   5.9  

>BT030439-1|ABO52859.1|  590|Drosophila melanogaster LD10347p
           protein.
          Length = 590

 Score =  107 bits (256), Expect = 2e-23
 Identities = 48/65 (73%), Positives = 58/65 (89%)
 Frame = +3

Query: 510 PAVHAGILARLSDSDQEDMKRQKYEMISVVVCNLYPFVQTVSKPDVTVADAVENIDIGGV 689
           PAVHAGIL+R +DSD  DM++Q +++I +VVCNLYPF  TV+KPDVT+ADAVENIDIGGV
Sbjct: 70  PAVHAGILSRTTDSDLADMRKQGFDLIQLVVCNLYPFASTVAKPDVTLADAVENIDIGGV 129

Query: 690 TLLRA 704
           TLLRA
Sbjct: 130 TLLRA 134



 Score = 99.5 bits (237), Expect = 5e-21
 Identities = 50/67 (74%), Positives = 56/67 (83%)
 Frame = +1

Query: 307 SNGKLALLSVSDKTGLLSLAKSLSECGLQLIASGGTATALRNAGLTVQDVSDITRAPEML 486
           S+ K+ALLSVSDKTGLL L KSL   G  L+ASGGTAT+LR AGL V+DVS+IT APEML
Sbjct: 2   SSSKIALLSVSDKTGLLDLGKSLVALGFDLVASGGTATSLRGAGLKVRDVSEITGAPEML 61

Query: 487 GGRVKTL 507
           GGRVKTL
Sbjct: 62  GGRVKTL 68



 Score = 34.3 bits (75), Expect = 0.21
 Identities = 14/23 (60%), Positives = 16/23 (69%)
 Frame = +2

Query: 710 KNHDRVTVVCDPADYDAVSKKSK 778
           KNH RVTVVC+  DYD V  + K
Sbjct: 137 KNHQRVTVVCEAVDYDRVLSELK 159


>BT011462-1|AAR99120.1|  590|Drosophila melanogaster RE29555p
           protein.
          Length = 590

 Score =  107 bits (256), Expect = 2e-23
 Identities = 48/65 (73%), Positives = 58/65 (89%)
 Frame = +3

Query: 510 PAVHAGILARLSDSDQEDMKRQKYEMISVVVCNLYPFVQTVSKPDVTVADAVENIDIGGV 689
           PAVHAGIL+R +DSD  DM++Q +++I +VVCNLYPF  TV+KPDVT+ADAVENIDIGGV
Sbjct: 70  PAVHAGILSRTTDSDLADMRKQGFDLIQLVVCNLYPFASTVAKPDVTLADAVENIDIGGV 129

Query: 690 TLLRA 704
           TLLRA
Sbjct: 130 TLLRA 134



 Score = 99.5 bits (237), Expect = 5e-21
 Identities = 50/67 (74%), Positives = 56/67 (83%)
 Frame = +1

Query: 307 SNGKLALLSVSDKTGLLSLAKSLSECGLQLIASGGTATALRNAGLTVQDVSDITRAPEML 486
           S+ K+ALLSVSDKTGLL L KSL   G  L+ASGGTAT+LR AGL V+DVS+IT APEML
Sbjct: 2   SSSKIALLSVSDKTGLLDLGKSLVALGFDLVASGGTATSLRGAGLKVRDVSEITGAPEML 61

Query: 487 GGRVKTL 507
           GGRVKTL
Sbjct: 62  GGRVKTL 68



 Score = 34.3 bits (75), Expect = 0.21
 Identities = 14/23 (60%), Positives = 16/23 (69%)
 Frame = +2

Query: 710 KNHDRVTVVCDPADYDAVSKKSK 778
           KNH RVTVVC+  DYD V  + K
Sbjct: 137 KNHQRVTVVCEAVDYDRVLSELK 159


>AE014297-3662|AAF56358.1|  590|Drosophila melanogaster CG11089-PA
           protein.
          Length = 590

 Score =  107 bits (256), Expect = 2e-23
 Identities = 48/65 (73%), Positives = 58/65 (89%)
 Frame = +3

Query: 510 PAVHAGILARLSDSDQEDMKRQKYEMISVVVCNLYPFVQTVSKPDVTVADAVENIDIGGV 689
           PAVHAGIL+R +DSD  DM++Q +++I +VVCNLYPF  TV+KPDVT+ADAVENIDIGGV
Sbjct: 70  PAVHAGILSRTTDSDLADMRKQGFDLIQLVVCNLYPFASTVAKPDVTLADAVENIDIGGV 129

Query: 690 TLLRA 704
           TLLRA
Sbjct: 130 TLLRA 134



 Score = 99.5 bits (237), Expect = 5e-21
 Identities = 50/67 (74%), Positives = 56/67 (83%)
 Frame = +1

Query: 307 SNGKLALLSVSDKTGLLSLAKSLSECGLQLIASGGTATALRNAGLTVQDVSDITRAPEML 486
           S+ K+ALLSVSDKTGLL L KSL   G  L+ASGGTAT+LR AGL V+DVS+IT APEML
Sbjct: 2   SSSKIALLSVSDKTGLLDLGKSLVALGFDLVASGGTATSLRGAGLKVRDVSEITGAPEML 61

Query: 487 GGRVKTL 507
           GGRVKTL
Sbjct: 62  GGRVKTL 68



 Score = 34.3 bits (75), Expect = 0.21
 Identities = 14/23 (60%), Positives = 16/23 (69%)
 Frame = +2

Query: 710 KNHDRVTVVCDPADYDAVSKKSK 778
           KNH RVTVVC+  DYD V  + K
Sbjct: 137 KNHQRVTVVCEAVDYDRVLSELK 159


>AY061343-1|AAL28891.1|  178|Drosophila melanogaster LD27358p
           protein.
          Length = 178

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = -3

Query: 664 TASATVTSGLDTVWTNGYRLQTTTLIISYF 575
           T +AT T  +   WTNGY L  TTL++S F
Sbjct: 73  TGNATFTREVPCKWTNGYHLD-TTLLLSVF 101


>AE013599-3195|AAF46720.1|  178|Drosophila melanogaster CG10795-PA
           protein.
          Length = 178

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = -3

Query: 664 TASATVTSGLDTVWTNGYRLQTTTLIISYF 575
           T +AT T  +   WTNGY L  TTL++S F
Sbjct: 73  TGNATFTREVPCKWTNGYHLD-TTLLLSVF 101


>D17550-1|BAA04488.1| 1235|Drosophila melanogaster tyrosine kinase
           protein.
          Length = 1235

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
 Frame = +3

Query: 534 ARLSDSDQEDMKRQKYEMISVVVCNLYPFVQTVSKPD--VTVADAVENIDIGGVTLLRAE 707
           A LSDS Q D+K+ + E+   VV  +   V   S     +TV  A E   +G    L  +
Sbjct: 458 AGLSDSIQ-DLKQTESEVAKPVVRRVVQKVSPSSSTPLIITVLSAEEETTVGQTEALPTD 516

Query: 708 PRTTTGSPSSVT-RPTT 755
             TTT S ++ T +P+T
Sbjct: 517 ESTTTTSTTTTTEKPST 533


>AE014296-868|AAF47916.2| 1233|Drosophila melanogaster CG7525-PA
           protein.
          Length = 1233

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
 Frame = +3

Query: 534 ARLSDSDQEDMKRQKYEMISVVVCNLYPFVQTVSKPD--VTVADAVENIDIGGVTLLRAE 707
           A LSDS Q D+K+ + E+   VV  +   V   S     +TV  A E   +G    L  +
Sbjct: 456 AGLSDSIQ-DLKQTESEVAKPVVRRVVQKVSPSSSTPLIITVLSAEEETTVGQTEALPTD 514

Query: 708 PRTTTGSPSSVT-RPTT 755
             TTT S ++ T +P+T
Sbjct: 515 ESTTTTSTTTTTEKPST 531


>AY075264-1|AAL68131.1|  494|Drosophila melanogaster AT23209p
           protein.
          Length = 494

 Score = 30.3 bits (65), Expect = 3.4
 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
 Frame = +3

Query: 405 WRYRHGASERRPHSSRCVGHHEST--GDARR-SGENFTPAVHAGIL--ARLSDSDQEDMK 569
           WR  H   ER   S+    HH S+  G++RR S    TP + +G++   RLS+  ++ +K
Sbjct: 194 WRSVHSDIEREQPSTSKKAHHGSSGGGESRRMSNVVKTPTITSGMVDTRRLSNVTRDQLK 253

Query: 570 R 572
           R
Sbjct: 254 R 254


>AE014297-4557|AAN14223.1|  494|Drosophila melanogaster CG15530-PB,
           isoform B protein.
          Length = 494

 Score = 30.3 bits (65), Expect = 3.4
 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
 Frame = +3

Query: 405 WRYRHGASERRPHSSRCVGHHEST--GDARR-SGENFTPAVHAGIL--ARLSDSDQEDMK 569
           WR  H   ER   S+    HH S+  G++RR S    TP + +G++   RLS+  ++ +K
Sbjct: 194 WRSVHSDIEREQPSTSKKAHHGSSGGGESRRMSNVVKTPTITSGMVDTRRLSNVTRDQLK 253

Query: 570 R 572
           R
Sbjct: 254 R 254


>AE014297-4556|AAF57018.2|  494|Drosophila melanogaster CG15530-PA,
           isoform A protein.
          Length = 494

 Score = 30.3 bits (65), Expect = 3.4
 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
 Frame = +3

Query: 405 WRYRHGASERRPHSSRCVGHHEST--GDARR-SGENFTPAVHAGIL--ARLSDSDQEDMK 569
           WR  H   ER   S+    HH S+  G++RR S    TP + +G++   RLS+  ++ +K
Sbjct: 194 WRSVHSDIEREQPSTSKKAHHGSSGGGESRRMSNVVKTPTITSGMVDTRRLSNVTRDQLK 253

Query: 570 R 572
           R
Sbjct: 254 R 254


>AE014296-571|AAF47722.1|  556|Drosophila melanogaster CG14956-PA
           protein.
          Length = 556

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 15/54 (27%), Positives = 24/54 (44%)
 Frame = +3

Query: 669 NIDIGGVTLLRAEPRTTTGSPSSVTRPTTMLCQRNQREQTSSDDFGHKAEISPE 830
           +  IGGV  +  +P  T  SP+ +      +  R  R +  SD      +ISP+
Sbjct: 64  SFSIGGVGSVECDPDGTPSSPAVMGTKRNRVLTRQPRVKRDSDSISSTNQISPD 117


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,603,627
Number of Sequences: 53049
Number of extensions: 636327
Number of successful extensions: 2275
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2275
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3942192384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)