Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1375
(831 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58747-1|AAL27234.3| 594|Caenorhabditis elegans Hypothetical pr... 90 2e-18
U47144-3|AAB52619.1| 292|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z82090-3|CAD98728.1| 1516|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z82090-2|CAB05007.2| 1501|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z82090-1|CAB05006.1| 1508|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z50176-2|CAA90539.1| 1115|Caenorhabditis elegans Hypothetical pr... 30 2.3
U97404-2|AAB93309.1| 795|Caenorhabditis elegans Acid-sensing/am... 29 3.1
Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical pr... 29 4.1
M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger pro... 29 4.1
AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein. 29 5.4
AF003135-4|AAO38590.1| 1039|Caenorhabditis elegans Hypothetical ... 29 5.4
AF003135-3|AAO38589.1| 1184|Caenorhabditis elegans Hypothetical ... 29 5.4
AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical ... 29 5.4
AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical ... 29 5.4
Z75710-8|CAO82023.1| 394|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 28 9.4
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 28 9.4
U70852-5|AAK29817.2| 322|Caenorhabditis elegans Hypothetical pr... 28 9.4
U23525-7|AAC46569.1| 557|Caenorhabditis elegans Yeast smf (diva... 28 9.4
U23525-6|AAU05559.1| 471|Caenorhabditis elegans Yeast smf (diva... 28 9.4
>U58747-1|AAL27234.3| 594|Caenorhabditis elegans Hypothetical
protein C55F2.1b protein.
Length = 594
Score = 90.2 bits (214), Expect = 2e-18
Identities = 41/65 (63%), Positives = 52/65 (80%)
Frame = +3
Query: 510 PAVHAGILARLSDSDQEDMKRQKYEMISVVVCNLYPFVQTVSKPDVTVADAVENIDIGGV 689
PAVH GILAR ++SD++D+++ +SVVVCNLYPF +TV D +V +AVENIDIGGV
Sbjct: 71 PAVHGGILARDTESDRKDLEKHNISFVSVVVCNLYPFKKTVQSKDCSVEEAVENIDIGGV 130
Query: 690 TLLRA 704
TLLRA
Sbjct: 131 TLLRA 135
Score = 89.0 bits (211), Expect = 4e-18
Identities = 43/69 (62%), Positives = 52/69 (75%)
Frame = +1
Query: 301 MASNGKLALLSVSDKTGLLSLAKSLSECGLQLIASGGTATALRNAGLTVQDVSDITRAPE 480
M LA++SVSDKTGL+ LA L GL LIASGGTA A+R+ G+ V DV+D+T+ PE
Sbjct: 1 MTDGKSLAIISVSDKTGLIPLAHGLVSAGLTLIASGGTAKAIRDQGIDVHDVADVTKFPE 60
Query: 481 MLGGRVKTL 507
MLGGRVKTL
Sbjct: 61 MLGGRVKTL 69
Score = 38.7 bits (86), Expect = 0.005
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +2
Query: 710 KNHDRVTVVCDPADYDAVSKKSK 778
KNH+RV+V+CDPADYD + + K
Sbjct: 138 KNHERVSVICDPADYDHIISELK 160
>U47144-3|AAB52619.1| 292|Caenorhabditis elegans Hypothetical
protein ZC53.6 protein.
Length = 292
Score = 31.1 bits (67), Expect = 1.0
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Frame = -2
Query: 488 PSISGALVMSDTS*TVRPAFRSAVAVPPLAINCRPHSDRLFANESRPVLSETLRRASFPF 309
PS S A S +RP +++ A P A H+D+LF E LRR +FPF
Sbjct: 6 PSSSEAPTPSGQCSRLRPRSKNSTAPEPPAPKLTDHTDKLFI--------EQLRRTTFPF 57
Query: 308 DAMFCLLKHYCV-----TDLNLGD 252
+ L + + T+L++GD
Sbjct: 58 EFQNKLDSRWTIGDMLKTELSIGD 81
>Z82090-3|CAD98728.1| 1516|Caenorhabditis elegans Hypothetical
protein ZK337.1c protein.
Length = 1516
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/77 (19%), Positives = 29/77 (37%)
Frame = +3
Query: 480 DARRSGENFTPAVHAGILARLSDSDQEDMKRQKYEMISVVVCNLYPFVQTVSKPDVTVAD 659
D + G+ F P + ++ L D +K + + V YP+ S
Sbjct: 376 DVEKQGDTFKPGLTYNVVVALKQMDDTPVKATLPKRVQVSTFYNYPYNHDTSSLQEEKET 435
Query: 660 AVENIDIGGVTLLRAEP 710
+ +D G ++L +P
Sbjct: 436 KIVEVDAHGTSVLTLQP 452
>Z82090-2|CAB05007.2| 1501|Caenorhabditis elegans Hypothetical
protein ZK337.1b protein.
Length = 1501
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/77 (19%), Positives = 29/77 (37%)
Frame = +3
Query: 480 DARRSGENFTPAVHAGILARLSDSDQEDMKRQKYEMISVVVCNLYPFVQTVSKPDVTVAD 659
D + G+ F P + ++ L D +K + + V YP+ S
Sbjct: 376 DVEKQGDTFKPGLTYNVVVALKQMDDTPVKATLPKRVQVSTFYNYPYNHDTSSLQEEKET 435
Query: 660 AVENIDIGGVTLLRAEP 710
+ +D G ++L +P
Sbjct: 436 KIVEVDAHGTSVLTLQP 452
>Z82090-1|CAB05006.1| 1508|Caenorhabditis elegans Hypothetical
protein ZK337.1a protein.
Length = 1508
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/77 (19%), Positives = 29/77 (37%)
Frame = +3
Query: 480 DARRSGENFTPAVHAGILARLSDSDQEDMKRQKYEMISVVVCNLYPFVQTVSKPDVTVAD 659
D + G+ F P + ++ L D +K + + V YP+ S
Sbjct: 376 DVEKQGDTFKPGLTYNVVVALKQMDDTPVKATLPKRVQVSTFYNYPYNHDTSSLQEEKET 435
Query: 660 AVENIDIGGVTLLRAEP 710
+ +D G ++L +P
Sbjct: 436 KIVEVDAHGTSVLTLQP 452
>Z50176-2|CAA90539.1| 1115|Caenorhabditis elegans Hypothetical
protein C09G1.2 protein.
Length = 1115
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/69 (23%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = -1
Query: 591 LSSRTSDVSCLPGQSRI-IELRSQHVPLE*SFHPTSEHLRCSRDVRHILNCEAGVPKRRG 415
+SS+ + +C ++R+ E+ + ++P + S H R +R +L E PK++
Sbjct: 204 ISSKGQEPTCFQKKARLRTEIDTNYLPAKISIHSRENWTRDREHLRRLLESEEPNPKKQK 263
Query: 414 GTATGNQLQ 388
T + L+
Sbjct: 264 SVPTEHDLK 272
>U97404-2|AAB93309.1| 795|Caenorhabditis elegans
Acid-sensing/amiloride-sensitiveion channel family
protein 1 protein.
Length = 795
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/84 (19%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +3
Query: 561 DMKRQKYEMISVVVCNLYPFVQTVSKPDVTVADAVENIDIG-GVTLLRAEPRTTTGSPSS 737
++K ++ + +V +CN+ P+ + ++ + +A+E ++ + A + S +S
Sbjct: 92 EIKFEEIKFPAVTICNMNPYKNSAARELGAIRNAIEAFELAIDKSDGNAHSKRKKRSANS 151
Query: 738 VTRPTTMLCQRNQREQTSSDDFGH 809
P +LC + + ++ D+GH
Sbjct: 152 KMVPIDLLC-KEEHGMFTAHDYGH 174
>Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical protein
C25D7.3 protein.
Length = 2150
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +3
Query: 513 AVHAGILARLSDSDQEDMKRQKYEMISVVVCNLYPFVQTVSKPDVTVADA 662
AV I +SD++ D+ R+K E S++ N+ Q +++ DVT A
Sbjct: 990 AVTENIRQEMSDAEMRDLMRKKREQYSMLFPNVPQPFQPLNRFDVTAPGA 1039
>M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger protein
protein.
Length = 2150
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +3
Query: 513 AVHAGILARLSDSDQEDMKRQKYEMISVVVCNLYPFVQTVSKPDVTVADA 662
AV I +SD++ D+ R+K E S++ N+ Q +++ DVT A
Sbjct: 990 AVTENIRQEMSDAEMRDLMRKKREQYSMLFPNVPQPFQPLNRFDVTAPGA 1039
>AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein.
Length = 1666
Score = 28.7 bits (61), Expect = 5.4
Identities = 25/85 (29%), Positives = 41/85 (48%)
Frame = +1
Query: 250 QSPKFKSVTQ*CLSKQNMASNGKLALLSVSDKTGLLSLAKSLSECGLQLIASGGTATALR 429
Q+P +SV+Q L+ G +VSD ++L K+ GL ++A+ G R
Sbjct: 938 QNPIVRSVSQTTLTSIPTTQFGDSFGSAVSDTISKVTLRKNGGGIGLSIVAAQGVGD--R 995
Query: 430 NAGLTVQDVSDITRAPEMLGGRVKT 504
G+ V+ V + T P GR++T
Sbjct: 996 QMGIYVKKVVEGT--PAAHDGRLET 1018
>AF003135-4|AAO38590.1| 1039|Caenorhabditis elegans Hypothetical
protein W03F11.6e protein.
Length = 1039
Score = 28.7 bits (61), Expect = 5.4
Identities = 25/85 (29%), Positives = 41/85 (48%)
Frame = +1
Query: 250 QSPKFKSVTQ*CLSKQNMASNGKLALLSVSDKTGLLSLAKSLSECGLQLIASGGTATALR 429
Q+P +SV+Q L+ G +VSD ++L K+ GL ++A+ G R
Sbjct: 936 QNPIVRSVSQTTLTSIPTTQFGDSFGSAVSDTISKVTLRKNGGGIGLSIVAAQGVGD--R 993
Query: 430 NAGLTVQDVSDITRAPEMLGGRVKT 504
G+ V+ V + T P GR++T
Sbjct: 994 QMGIYVKKVVEGT--PAAHDGRLET 1016
>AF003135-3|AAO38589.1| 1184|Caenorhabditis elegans Hypothetical
protein W03F11.6d protein.
Length = 1184
Score = 28.7 bits (61), Expect = 5.4
Identities = 25/85 (29%), Positives = 41/85 (48%)
Frame = +1
Query: 250 QSPKFKSVTQ*CLSKQNMASNGKLALLSVSDKTGLLSLAKSLSECGLQLIASGGTATALR 429
Q+P +SV+Q L+ G +VSD ++L K+ GL ++A+ G R
Sbjct: 936 QNPIVRSVSQTTLTSIPTTQFGDSFGSAVSDTISKVTLRKNGGGIGLSIVAAQGVGD--R 993
Query: 430 NAGLTVQDVSDITRAPEMLGGRVKT 504
G+ V+ V + T P GR++T
Sbjct: 994 QMGIYVKKVVEGT--PAAHDGRLET 1016
>AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical
protein W03F11.6c protein.
Length = 1419
Score = 28.7 bits (61), Expect = 5.4
Identities = 25/85 (29%), Positives = 41/85 (48%)
Frame = +1
Query: 250 QSPKFKSVTQ*CLSKQNMASNGKLALLSVSDKTGLLSLAKSLSECGLQLIASGGTATALR 429
Q+P +SV+Q L+ G +VSD ++L K+ GL ++A+ G R
Sbjct: 936 QNPIVRSVSQTTLTSIPTTQFGDSFGSAVSDTISKVTLRKNGGGIGLSIVAAQGVGD--R 993
Query: 430 NAGLTVQDVSDITRAPEMLGGRVKT 504
G+ V+ V + T P GR++T
Sbjct: 994 QMGIYVKKVVEGT--PAAHDGRLET 1016
>AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical
protein W03F11.6a protein.
Length = 1658
Score = 28.7 bits (61), Expect = 5.4
Identities = 25/85 (29%), Positives = 41/85 (48%)
Frame = +1
Query: 250 QSPKFKSVTQ*CLSKQNMASNGKLALLSVSDKTGLLSLAKSLSECGLQLIASGGTATALR 429
Q+P +SV+Q L+ G +VSD ++L K+ GL ++A+ G R
Sbjct: 936 QNPIVRSVSQTTLTSIPTTQFGDSFGSAVSDTISKVTLRKNGGGIGLSIVAAQGVGD--R 993
Query: 430 NAGLTVQDVSDITRAPEMLGGRVKT 504
G+ V+ V + T P GR++T
Sbjct: 994 QMGIYVKKVVEGT--PAAHDGRLET 1016
>Z75710-8|CAO82023.1| 394|Caenorhabditis elegans Hypothetical
protein D1081.10 protein.
Length = 394
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 246 PPVTQVQVSYTVVLEQTEHGVKWKTSS-SQRFRQDGS 353
PP V +S T VL + +KWK S ++R + D S
Sbjct: 129 PPTNAVFISQTHVLTSSSWFIKWKKSKHTERSKSDSS 165
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical protein
F53B7.5b protein.
Length = 2892
Score = 27.9 bits (59), Expect = 9.4
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = +1
Query: 304 ASNGKLALLSVSDKTGLLSLAKSLSECGLQLIASGGTATALRNAGLTVQDVSD 462
ASNG A + S T A + S+CG I S GT + N TV +D
Sbjct: 1497 ASNGVTAPPTTSTTTVKDDTAPACSQCGRAPIVSVGTGSTYLNGFTTVVQSTD 1549
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical protein
F53B7.5a protein.
Length = 3095
Score = 27.9 bits (59), Expect = 9.4
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = +1
Query: 304 ASNGKLALLSVSDKTGLLSLAKSLSECGLQLIASGGTATALRNAGLTVQDVSD 462
ASNG A + S T A + S+CG I S GT + N TV +D
Sbjct: 1497 ASNGVTAPPTTSTTTVKDDTAPACSQCGRAPIVSVGTGSTYLNGFTTVVQSTD 1549
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 27.9 bits (59), Expect = 9.4
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = +1
Query: 304 ASNGKLALLSVSDKTGLLSLAKSLSECGLQLIASGGTATALRNAGLTVQDVSD 462
ASNG A + S T A + S+CG I S GT + N TV +D
Sbjct: 1497 ASNGVTAPPTTSTTTVKDDTAPACSQCGRAPIVSVGTGSTYLNGFTTVVQSTD 1549
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 27.9 bits (59), Expect = 9.4
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = +1
Query: 304 ASNGKLALLSVSDKTGLLSLAKSLSECGLQLIASGGTATALRNAGLTVQDVSD 462
ASNG A + S T A + S+CG I S GT + N TV +D
Sbjct: 1497 ASNGVTAPPTTSTTTVKDDTAPACSQCGRAPIVSVGTGSTYLNGFTTVVQSTD 1549
>U70852-5|AAK29817.2| 322|Caenorhabditis elegans Hypothetical
protein F45E4.6 protein.
Length = 322
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +3
Query: 582 EMISVVVCNLYPFVQTVSKPDVTVADAVENIDIGGVTLLRAEPRTTTGSPSSVTR 746
+ I + +LYPFV + T ADAV++ + + + RTTT + + T+
Sbjct: 244 DRIDFTLYDLYPFVGKLGGCIYTEADAVDDKNSIHTLFIYSTTRTTTTTAKTTTK 298
>U23525-7|AAC46569.1| 557|Caenorhabditis elegans Yeast smf
(divalent cation transporter)homolog protein 1, isoform
a protein.
Length = 557
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 22 FVFFISIFCLLSCEAIHCLIPIQQKKKNSS 111
FV +++++CL+SCE I + I+ N S
Sbjct: 506 FVLYLALYCLVSCEIIPDTVSIRGFSFNKS 535
>U23525-6|AAU05559.1| 471|Caenorhabditis elegans Yeast smf
(divalent cation transporter)homolog protein 1, isoform
b protein.
Length = 471
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 22 FVFFISIFCLLSCEAIHCLIPIQQKKKNSS 111
FV +++++CL+SCE I + I+ N S
Sbjct: 420 FVLYLALYCLVSCEIIPDTVSIRGFSFNKS 449
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,644,107
Number of Sequences: 27780
Number of extensions: 325549
Number of successful extensions: 1100
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1098
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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