Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1374X
         (352 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          25   0.62 
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    25   0.62 
AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    25   1.1  
AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate phospho...    24   1.9  
AY187040-1|AAO39754.1|  211|Anopheles gambiae putative antennal ...    24   1.9  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   3.3  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   4.4  
AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl c...    23   4.4  

>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 25.4 bits (53), Expect = 0.62
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -1

Query: 334 RTLPPSRRSAAAVEPGVGGERLSSSGPMRRQSPP 233
           RT+PP+R +AAA  P     R + +   RR+  P
Sbjct: 475 RTIPPTRVAAAAAAPEGRRRRRAIARARRRRCRP 508


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 25.4 bits (53), Expect = 0.62
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -1

Query: 334 RTLPPSRRSAAAVEPGVGGERLS-SSGPMRRQS 239
           R +PPSRR+     P  GG   S  S P RR+S
Sbjct: 248 RKIPPSRRNPRRRSPRSGGRWPSCRSPPARRRS 280


>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -2

Query: 198 TAPHATVTLARWHQEDGTTRRRLRTAMR 115
           TA  AT +L  W + DGT R R+R   R
Sbjct: 234 TAVAATTSL--WERRDGTQRARVRLPRR 259


>AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate
           phosphoribosyltransferase-like protein protein.
          Length = 519

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -2

Query: 162 HQEDGTTRRRLRTAM 118
           H+EDGTTR  L  AM
Sbjct: 208 HKEDGTTRDLLELAM 222


>AY187040-1|AAO39754.1|  211|Anopheles gambiae putative antennal
           carrier protein A5 protein.
          Length = 211

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +2

Query: 173 RVTVACGAVSAPLGRPVTITGRRLPPHRAGAGQ 271
           RVTVACGAV A     VT+ G+   P     G+
Sbjct: 6   RVTVACGAVLA----LVTVRGQAANPTTEAFGR 34


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
            channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 258  PELDKRSPPTPGSTAAALRRXGGRVLPLP 344
            P+ D+RS PTP  +     + G RV+P P
Sbjct: 1088 PDYDQRSTPTPQRSHT---QAGPRVVPDP 1113


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 261  ELDKRSPPTPGSTAAALRRXGGRVLPLPFR 350
            E++ + PP  G  AAA    GG    +P R
Sbjct: 1294 EINGKQPPNDGGGAAAAAAGGGYPPLMPQR 1323


>AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl
           cyclase beta subunit protein.
          Length = 649

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 255 GPELDKRSPPTPGSTA 302
           GPE  ++ P  PG+TA
Sbjct: 242 GPEWQQKGPKGPGTTA 257


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 321,345
Number of Sequences: 2352
Number of extensions: 5371
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 25364985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)