Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1372
         (839 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       25   0.56 
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    25   0.99 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   5.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.3  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    22   7.0  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 25.4 bits (53), Expect = 0.56
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = -1

Query: 353 FSKFMVIPSFLYKVISRHSMSTYKI 279
           F+KFM + S  YK+I++   +TY+I
Sbjct: 421 FAKFMPLYSGPYKIIAKPHPNTYQI 445


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 24.6 bits (51), Expect = 0.99
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +2

Query: 176 KQNFLKIEFKKSIIPPYRINIFLLNHVSVSY 268
           +  F   EFK +  PP ++N + L  V  +Y
Sbjct: 196 RHEFFLAEFKSAKTPPNKLNCYDLRRVRKNY 226


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -3

Query: 162 FLNCYCYFSVN 130
           F  CYCY+S++
Sbjct: 551 FAFCYCYYSIS 561


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 774 FYLLCIVYFF 803
           F+LLCI YF+
Sbjct: 141 FFLLCIYYFY 150


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = -1

Query: 683 KIIFIISKWLVFKKDKHKIN*KIFD 609
           K+I  ++ W +++ DK + + K  D
Sbjct: 25  KVICYVASWAIYRPDKGEYHPKNID 49


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,200
Number of Sequences: 336
Number of extensions: 4164
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23140487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)