Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1372
         (839 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant r...    25   2.2  
AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.     25   2.9  
AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    24   6.6  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   8.7  

>AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant
           receptor Or5 protein.
          Length = 391

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 23/65 (35%), Positives = 32/65 (49%)
 Frame = -2

Query: 694 IIFKKLYSSSVNG*YLKRINIKLIKKSLIFCPINCFKYCLNINF*PSLTVVPASVNYYYG 515
           I F+K   S + G YL RIN ++ + S I+C   C   CL I +     V P+S  Y   
Sbjct: 101 IAFRKDVPSQM-GDYLVRINHRIDRFSKIYC---CSHLCLAIFY----WVAPSSSTYLAY 152

Query: 514 LEANH 500
           L A +
Sbjct: 153 LGARN 157


>AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.
          Length = 603

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 637 NIKLIKKSLIFCPINCFKYCLNI 569
           N+K     L FC I CF + LN+
Sbjct: 251 NMKAASTELNFCHIPCFAHTLNL 273


>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 6/26 (23%), Positives = 18/26 (69%)
 Frame = +2

Query: 314 LCIRMRGLP*ILKTIVYSICILVLIW 391
           +C+ +   P +++  ++++C+L +IW
Sbjct: 114 MCLHLYLSPDVVQANIHNLCVLRVIW 139


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 365  SICILVLIWCSVITVIYFLIEY 430
            ++  L+ +W  V T  +FL EY
Sbjct: 1042 TVAFLIALWSCVSTPFFFLDEY 1063


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 750,752
Number of Sequences: 2352
Number of extensions: 13750
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88891965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)