Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1372
         (839 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81458-2|CAB03822.1|  386|Caenorhabditis elegans Hypothetical pr...    30   2.4  
Z75552-3|CAA99940.1|  465|Caenorhabditis elegans Hypothetical pr...    28   9.5  

>Z81458-2|CAB03822.1|  386|Caenorhabditis elegans Hypothetical
           protein C03E10.3 protein.
          Length = 386

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = -3

Query: 216 IMLFLNSIFRKFCFCRHCFLNCYCYFSVNKINY 118
           I +F N  FR+  F  +CFLN   Y S N+I Y
Sbjct: 332 IKMFFNIQFREPSFSNNCFLN-ILYLSSNQITY 363


>Z75552-3|CAA99940.1|  465|Caenorhabditis elegans Hypothetical
           protein W04D2.3 protein.
          Length = 465

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -2

Query: 802 KKYTIHNK*KFILRNFGYKHGYI*TGIL*KQILYYTIIFKKLY 674
           KK  +H    F+  NF Y  G+I    L  ++LY+  +F +LY
Sbjct: 178 KKVQVHKTVTFL--NFQYSSGFISWIYLFTKVLYFLNVFAQLY 218


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,384,032
Number of Sequences: 27780
Number of extensions: 331727
Number of successful extensions: 807
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 807
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)