Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1369
(834 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0585 - 26386248-26386271,26386510-26386699,26387363-263874... 36 0.040
11_06_0490 - 24293218-24293373,24293454-24293521,24293845-242939... 34 0.12
05_03_0256 - 11110636-11110875 34 0.12
08_02_0139 + 13065468-13065902,13067196-13067279,13068221-13068499 33 0.28
10_02_0167 - 6100676-6102111,6102174-6102708,6102967-6103975,610... 31 0.86
02_05_0143 + 26251401-26253734,26254658-26254810,26254951-26256783 31 0.86
01_01_0325 + 2631637-2631882,2632715-2632788,2632874-2633006,263... 31 0.86
08_01_0620 - 5416197-5416225,5416333-5416652,5417144-5417235,541... 31 1.1
07_01_0710 - 5355277-5355666 31 1.1
03_03_0164 - 14979364-14979479,14979613-14980102 31 1.5
09_02_0065 + 3799748-3800182 30 2.0
12_02_0188 - 15158824-15159215,15159299-15159809,15159885-151600... 30 2.6
11_01_0387 + 2922208-2922704,2922956-2923088,2923487-2923549,292... 30 2.6
01_01_1189 + 9454042-9455655 30 2.6
10_08_0198 + 15688142-15690427,15690524-15690607,15691232-156913... 29 3.5
08_02_0292 - 15420378-15421229 29 3.5
05_01_0013 - 85732-86829 29 3.5
04_04_0094 - 22770181-22770453,22770657-22770866,22771069-227713... 29 3.5
03_02_0190 + 6263032-6263449,6263616-6263767,6264754-6264975 29 3.5
09_06_0360 - 22510132-22510433,22510577-22510716,22510979-225110... 29 4.6
08_02_0509 - 17988458-17988892,17988986-17989147,17989542-17990378 29 4.6
05_07_0071 - 27481876-27482737,27484328-27484950 29 4.6
04_03_0676 + 18574651-18575283 29 4.6
12_02_0160 + 14585559-14586230 29 6.0
06_03_1037 - 27058002-27058082,27058856-27059041,27060033-270601... 29 6.0
05_04_0125 - 18241542-18242129 29 6.0
04_04_0579 - 26355431-26355684,26355988-26356073,26356292-263563... 29 6.0
09_06_0097 + 20845417-20845518,20845728-20846581,20846666-208467... 28 8.0
05_03_0369 - 13136146-13136175,13136237-13136908,13136926-131370... 28 8.0
05_01_0570 + 5061600-5062142,5062790-5062972 28 8.0
05_01_0156 - 1048689-1049567 28 8.0
03_06_0301 - 32974276-32974638,32974842-32974967,32975056-329751... 28 8.0
03_05_1004 + 29621209-29621590,29622615-29622827,29622974-296233... 28 8.0
>04_04_0585 -
26386248-26386271,26386510-26386699,26387363-26387463,
26387554-26387685,26387759-26387857,26387956-26388127,
26388217-26388512,26388601-26388726,26388848-26389062,
26389154-26389225,26389299-26389368,26389441-26389517,
26389605-26389923,26390034-26390225,26390321-26390551,
26390585-26390950,26392251-26392313,26392394-26392456,
26392544-26392642,26393497-26393523,26394299-26394358,
26395230-26396147,26396243-26397268
Length = 1645
Score = 35.9 bits (79), Expect = 0.040
Identities = 20/56 (35%), Positives = 26/56 (46%)
Frame = -2
Query: 425 SRRETSGRRGEDISSGQGERAGGHRSRQARGRPGHRTRTQPAAEGRQRTNRSEADK 258
SR R E SG ER+GG SR+ PG R + PA +R +R + K
Sbjct: 194 SRPSPRRRTPERKRSGSHERSGGSGSRRVSRSPGRRADSVPATASGERASRQQPGK 249
>11_06_0490 -
24293218-24293373,24293454-24293521,24293845-24293986,
24294079-24294699,24294791-24294871,24295002-24295072,
24296106-24296176,24296568-24296675,24296786-24297024,
24297493-24297657
Length = 573
Score = 34.3 bits (75), Expect = 0.12
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -2
Query: 443 QRQTNKSRRETSGR-RGEDISSGQGERAGGHRSRQARGRPGHRTRTQPAAEGRQRTNRSE 267
+ + RRE R R +D +G + R R G HR+R++ ++GR R +RS
Sbjct: 106 EHRDRSERREHHDRERSDDRDRRRGHDSERRRDRDRDGHRRHRSRSRSPSKGRDRRSRSR 165
Query: 266 ADKR 255
+ R
Sbjct: 166 SRSR 169
>05_03_0256 - 11110636-11110875
Length = 79
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -2
Query: 398 GEDISSGQGERAGGHRSRQAR-GRPGHRTRTQPAAEGRQRTNRSEADK 258
GE+ +SG G+ GG SR R G R + GR+R NR + D+
Sbjct: 26 GEEEASGGGKNVGGRMSRHPRSGATQQRGKGNHIGVGRKRPNRKDQDR 73
>08_02_0139 + 13065468-13065902,13067196-13067279,13068221-13068499
Length = 265
Score = 33.1 bits (72), Expect = 0.28
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -2
Query: 431 NKSRRETSGRRGEDISSGQGERAG-GHRSRQARG 333
N R+ R+G I SG+G+ AG GH+ ++ARG
Sbjct: 81 NPGARKQKTRKGRGIGSGKGKTAGRGHKGQKARG 114
>10_02_0167 -
6100676-6102111,6102174-6102708,6102967-6103975,
6104006-6105036
Length = 1336
Score = 31.5 bits (68), Expect = 0.86
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = -2
Query: 431 NKSRRETSGRRGEDISSGQGERAGGHRSRQARGRPGHRTRTQPAAEGRQRTNRSEADKRD 252
N+SRR S RR + + +R R ++ GH R +G +R + SE + D
Sbjct: 67 NRSRRHVSSRRHDRGNRPNEDRDYNDREQRGPDNTGHGRRRNDDDDGDRRRDNSERQRED 126
>02_05_0143 + 26251401-26253734,26254658-26254810,26254951-26256783
Length = 1439
Score = 31.5 bits (68), Expect = 0.86
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -2
Query: 434 TNKSRRETSGRRGEDISSGQGERAGG-HRSRQARGRPGHRTRTQPAAEGRQRTNRSEADK 258
T + R + R GE+ G G RA SR+ R R R+R+ AA R ++R +
Sbjct: 50 TGRGRARAAERVGEEAPRGSGRRAAPVVASRRRRRRSRSRSRSPRAARPRAESSRRPTAR 109
Query: 257 R 255
R
Sbjct: 110 R 110
>01_01_0325 +
2631637-2631882,2632715-2632788,2632874-2633006,
2633091-2633172,2633471-2633580,2633659-2633751,
2633854-2633904,2634013-2634105,2635257-2636129,
2636204-2636316,2636436-2636448
Length = 626
Score = 31.5 bits (68), Expect = 0.86
Identities = 17/61 (27%), Positives = 24/61 (39%)
Frame = -2
Query: 428 KSRRETSGRRGEDISSGQGERAGGHRSRQARGRPGHRTRTQPAAEGRQRTNRSEADKRDI 249
+++R G +S + GG R R RGR R + E + NR A I
Sbjct: 39 EAKRRRKDAMGSSVSGSRSGGGGGRRLRHGRGRRARAFRRKLEEENKNSNNRPRASNVVI 98
Query: 248 A 246
A
Sbjct: 99 A 99
>08_01_0620 -
5416197-5416225,5416333-5416652,5417144-5417235,
5417304-5417394,5417489-5417577,5417812-5417929,
5418007-5418098,5418180-5418215,5418323-5418403,
5418510-5418617,5418809-5418901,5419045-5419146,
5419345-5419449,5419526-5419612,5419952-5420227
Length = 572
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = -2
Query: 407 GRRGEDISSGQGERAGGHRSRQARGRPGHRTRTQPAAEGRQRTNRSEADKRDIAG 243
GR G+ G+R GG + GR G R + +G +R R R AG
Sbjct: 505 GRSGDRFGGRSGDRFGGRSGGRFGGRDGGRRGGRGGRDGGRRGGRGGFQSRQSAG 559
>07_01_0710 - 5355277-5355666
Length = 129
Score = 31.1 bits (67), Expect = 1.1
Identities = 23/57 (40%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = -2
Query: 407 GRRGEDISSGQGERAGGHRSRQARGRPGHRTRTQPAAEGRQRT---NRSEADKRDIA 246
G R G+ ER G RSR+ RGR R PA E R+RT N E +R +A
Sbjct: 62 GHRRVGDRGGENERGG--RSRRRRGRVA-RGPLAPAGESRERTSAANSGEGRRRRVA 115
>03_03_0164 - 14979364-14979479,14979613-14980102
Length = 201
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/52 (42%), Positives = 26/52 (50%)
Frame = -2
Query: 428 KSRRETSGRRGEDISSGQGERAGGHRSRQARGRPGHRTRTQPAAEGRQRTNR 273
K+R + RRG + SG GE G R RQ RG PG T T +G T R
Sbjct: 62 KARGQWQQRRGGGVGSGNGEARG--RRRQRRG-PG--TATTMLEDGSIHTQR 108
Score = 28.7 bits (61), Expect = 6.0
Identities = 23/65 (35%), Positives = 29/65 (44%)
Frame = -2
Query: 467 AGGICGD*QRQTNKSRRETSGRRGEDISSGQGERAGGHRSRQARGRPGHRTRTQPAAEGR 288
AG GD QR+ + RR G+R E SG G G R + + R G A GR
Sbjct: 27 AGTSNGDTQRRRGQ-RRRGRGQRRERRGSGVGGGNGKARGQWQQRRGGGVGSGNGEARGR 85
Query: 287 QRTNR 273
+R R
Sbjct: 86 RRQRR 90
>09_02_0065 + 3799748-3800182
Length = 144
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = -2
Query: 464 GGICGD*QRQTNKSRRETSGRRGEDIS-SGQGERAGGHRSRQARGRPGHRTRTQPAAEG 291
GG G +++ + E R GE + SG+GE A G ARG R R + +G
Sbjct: 75 GGEIGRRRKRKRSGKGEKKKRSGEGLERSGEGEIARGREGGIARGAGRERGRREGGRDG 133
>12_02_0188 -
15158824-15159215,15159299-15159809,15159885-15160015,
15160107-15160310,15160385-15161066,15161158-15161414,
15161491-15161631,15161731-15162136
Length = 907
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = -2
Query: 425 SRRETSGRRGEDISSGQGERAGGHRSRQARGRPGHRTRTQPAA 297
SR+E S RRG + G E GG S Q+ R G R+ P A
Sbjct: 96 SRQEASFRRGVEQRGGTYEHGGGSGSAQSEARKG---RSNPIA 135
>11_01_0387 +
2922208-2922704,2922956-2923088,2923487-2923549,
2923564-2923680,2925040-2925399
Length = 389
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = -3
Query: 685 LVLHDATPQLHIQSNRTASSKSRAIETVDIGEVTSSIKTLETSAKNLLRSVSLLNI 518
L L D I +NR ++++S+ + GE+ ++TL+T A L ++LL +
Sbjct: 156 LALLDPKRAKRILANRQSAARSKERKIKYTGELERKVQTLQTEATTLSTQLTLLQL 211
>01_01_1189 + 9454042-9455655
Length = 537
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/76 (26%), Positives = 40/76 (52%)
Frame = -3
Query: 448 TDSDKQISRAAKLAEDAERTLAAVRESAREATEVVKHVADLATGLELSQQPKVDSALTEA 269
T+ DKQ + ++ED + TLAA ++ E+ + VA + ++ ++ K+DS ++
Sbjct: 418 TEDDKQGADTPDVSEDKKTTLAAEKDGNGESKD---EVAAPKSSNDMGREEKIDS--SKE 472
Query: 268 RQIRETSPVSSDDATL 221
+ SP S+ + L
Sbjct: 473 SEFSAASPPSAQEEDL 488
>10_08_0198 +
15688142-15690427,15690524-15690607,15691232-15691336,
15691420-15691528,15693037-15693188,15693278-15693583
Length = 1013
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = -2
Query: 440 RQTNKSRRETSGRRGEDISSGQGERAGGHRSRQARGRPGHRTRTQPAAEGRQRTNRSEAD 261
R + SRR D S G R GH +++ R RT + A R +RS AD
Sbjct: 89 RDGDSSRRRREDNNDWDSSRRSGSRTSGHDVSRSKSRSSDRTSSDRA---DTRDSRSSAD 145
Query: 260 K 258
+
Sbjct: 146 Q 146
>08_02_0292 - 15420378-15421229
Length = 283
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -2
Query: 452 GD*QRQTNKSRRETSGRRGEDISSGQGERAGGHRSRQARGRPG 324
G R+ +++RR + RRGE+ SSG G R+ Q G G
Sbjct: 41 GGRSRRRSRTRRRRARRRGEERSSGGGRSRMRRRTWQRAGGGG 83
>05_01_0013 - 85732-86829
Length = 365
Score = 29.5 bits (63), Expect = 3.5
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Frame = -3
Query: 451 ATDSDKQISRAAKLAEDAERTLAAVRESAREATEVVKHVADL--ATGLE--LSQQPKVDS 284
A +SD Q + AA ++ + AAVR R+A + +ADL ATG L V++
Sbjct: 29 ANNSDMQRTIAAATRKERQEMAAAVRRGRRQARAIA--IADLGCATGPNALLMAGDAVEA 86
Query: 283 ALTEARQIRETSP 245
L +A + +E +P
Sbjct: 87 MLGDAERQQEAAP 99
>04_04_0094 -
22770181-22770453,22770657-22770866,22771069-22771380,
22771767-22771937,22772078-22772184,22772541-22772622,
22773202-22773330
Length = 427
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = -3
Query: 406 EDAERTLAAVRESAREATEVVKHVADLATGLELSQQPKVDSALTEARQIRETSPVSSDDA 227
+D+E + A + S R + V ++ ++ + S PK S+L E + RE S DA
Sbjct: 146 DDSEASNPANKTSVRMYQQTVTGISQISFSADGSVSPKKPSSLPEVAKQRELSGTLETDA 205
Query: 226 TLK 218
K
Sbjct: 206 EAK 208
>03_02_0190 + 6263032-6263449,6263616-6263767,6264754-6264975
Length = 263
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -2
Query: 428 KSRRETSGRRGEDISSGQGERAG-GHRSRQARGRPGHR 318
K R R+G I++GQG G G R +++R PG R
Sbjct: 80 KGSRRRPKRKGRGIAAGQGASCGFGMRGQKSRSGPGVR 117
>09_06_0360 -
22510132-22510433,22510577-22510716,22510979-22511049,
22511152-22511352,22511541-22511786,22512148-22512209,
22512314-22512620
Length = 442
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 570 VLIDDVTSPISTVSIARLLDEAVRFDWI 653
VL DD+ +S S+ARL E ++ DW+
Sbjct: 270 VLQDDIIPRLSAASLARLRAEILKTDWV 297
>08_02_0509 - 17988458-17988892,17988986-17989147,17989542-17990378
Length = 477
Score = 29.1 bits (62), Expect = 4.6
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Frame = -2
Query: 407 GRRGEDISSGQGERAGGHRSRQARG--RPGHRTRTQPAAEGRQRTNRSEADKRDIAGK 240
GRR D +S GGH R R G+ + Q GR + + S AD G+
Sbjct: 87 GRRSGDATSASSRHGGGHADHAVRDVRRGGNVSTQQHHHRGRGQASPSSADHAASRGR 144
>05_07_0071 - 27481876-27482737,27484328-27484950
Length = 494
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = -2
Query: 362 GGHRSRQARGRPGHRTRTQ--PAAEGRQRTNRSEADKR 255
GGH +RGRPG R Q PAA G R+ D+R
Sbjct: 27 GGH----SRGRPGKSARLQLVPAAPGASMAERARDDRR 60
>04_03_0676 + 18574651-18575283
Length = 210
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -1
Query: 723 MSFPAHNKQDKADSFFTTQRLNYISNQ-TELLRPKVAQLRPSISAKSH 583
M+ P H + +FFT QR + I Q T L P+ A+ + + A+ +
Sbjct: 66 MNPPQHTTEHAEHAFFTPQRFDLIHRQITNLTNPREARTKKNPEARKN 113
>12_02_0160 + 14585559-14586230
Length = 223
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 464 GGICGD*QRQTNKSRRETSGRRGEDISSGQGERAGG 357
GG+ + R+ + +R GRRGE ++G G R G
Sbjct: 57 GGVAAETARRRRRRQRWRGGRRGEVETTGDGRRWQG 92
>06_03_1037 -
27058002-27058082,27058856-27059041,27060033-27060176,
27060284-27061183
Length = 436
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = -2
Query: 416 ETSGRRGEDISSGQGERAGGH--RSRQARGRPGHRTRTQPAAEGRQRTNRSE 267
E + +R ++ G G+ GG R R ARGR R R + GR+ + E
Sbjct: 193 EDAVKRAMELLGGGGDDDGGRGGRGRGARGRERGRGRGRDGGRGRRSADMEE 244
>05_04_0125 - 18241542-18242129
Length = 195
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = -2
Query: 461 GICGD*QRQTNKSRRETSG--RRGEDISSGQGERAGGHRSRQARGRPGHRTRTQPAA 297
G+ GD + + ++ R + G RR + G R GH +PG R R+ AA
Sbjct: 99 GLDGDSRIRVDEHRGDGRGGRRRRRGVGGSGGSRGSGHGEGGGAQQPGRRQRSVDAA 155
>04_04_0579 -
26355431-26355684,26355988-26356073,26356292-26356377,
26356596-26356788,26356895-26357094,26359257-26359379
Length = 313
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 738 FWDPLMSFPAHNKQDKADSFFTTQRLNYISNQT 640
FW P+ PA NK+D F T L+ + ++T
Sbjct: 200 FWYPIGHVPAMNKKDLTTCFLTYHSLSTLEDRT 232
>09_06_0097 +
20845417-20845518,20845728-20846581,20846666-20846726,
20847320-20847358,20847602-20847682
Length = 378
Score = 28.3 bits (60), Expect = 8.0
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = -3
Query: 430 ISRAAKLAEDAERTLAAVRESAREATEVVKHVADLATGLELSQQPKVDSALTEARQIRET 251
+SRA K+ DAE A E ++A + ++ +AD+ T E S + K +A R
Sbjct: 86 MSRADKIRRDAEIAKANANEFEKKANQ-LQIIADIETEREQSAKKKEQAAHDRLRDASTA 144
Query: 250 SPVSSD 233
V+ D
Sbjct: 145 RIVAID 150
>05_03_0369 -
13136146-13136175,13136237-13136908,13136926-13137016,
13137184-13137416,13137459-13137731,13137877-13138265,
13138325-13139156,13139847-13139922,13140027-13140414,
13141395-13141748,13142069-13142333,13143366-13143716
Length = 1317
Score = 28.3 bits (60), Expect = 8.0
Identities = 18/50 (36%), Positives = 20/50 (40%), Gaps = 4/50 (8%)
Frame = -2
Query: 425 SRRETSGRRGEDISSGQGERAGGHRSR----QARGRPGHRTRTQPAAEGR 288
S T GR E + GE GG R + R R G R P EGR
Sbjct: 427 SAESTLGRADEQLRRSDGEGKGGRDVRGGLRRCRRREGGRRPDSPTTEGR 476
>05_01_0570 + 5061600-5062142,5062790-5062972
Length = 241
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -2
Query: 422 RRETSGRRGEDISSGQGERAGGHRSRQARGRPGHRTRTQ 306
+R + R +S+G+G+ GG R R RG R R +
Sbjct: 140 QRRRATRARSRLSAGRGDGVGGARGRAVRGSARRRPRKE 178
>05_01_0156 - 1048689-1049567
Length = 292
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -1
Query: 813 RYSLMKQWTLR*YTVSLFFITA 748
R LMK+WT R Y SLF TA
Sbjct: 119 RLKLMKRWTSREYIKSLFLATA 140
>03_06_0301 -
32974276-32974638,32974842-32974967,32975056-32975131,
32975935-32976130,32976666-32976759,32977773-32978195
Length = 425
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = -3
Query: 673 DATPQLHIQSNRTASSKSRAIETVDIGEVTSSIKTLETSAKNLLRSVSLLN 521
D Q QSNR ++ +SR+ + + E+ + + L +LLR ++ +N
Sbjct: 232 DQRLQRRKQSNRESARRSRSRKAAHLNELEAQVSQLRVENSSLLRRLADVN 282
>03_05_1004 +
29621209-29621590,29622615-29622827,29622974-29623337,
29623751-29624573
Length = 593
Score = 28.3 bits (60), Expect = 8.0
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = -2
Query: 362 GGHRSRQ-ARGRPGHRTRTQPAA 297
G HRSR+ G+PGH + PAA
Sbjct: 247 GRHRSRKHVEGQPGHAAKAMPAA 269
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,494,594
Number of Sequences: 37544
Number of extensions: 353170
Number of successful extensions: 1455
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1445
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2303447664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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