BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1369 (834 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U32305-11|AAL50323.1| 663|Caenorhabditis elegans Splicing facto... 32 0.44 U32305-10|AAM75378.1| 749|Caenorhabditis elegans Splicing facto... 32 0.44 U32305-9|AAM75380.1| 751|Caenorhabditis elegans Splicing factor... 32 0.44 U06932-1|AAA64937.1| 749|Caenorhabditis elegans CeSWAP protein. 32 0.44 U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 31 1.0 U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 31 1.0 AF043704-2|AAX88816.1| 407|Caenorhabditis elegans Prion-like-(q... 31 1.0 Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical pr... 31 1.3 Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical p... 31 1.3 U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 31 1.3 U58761-7|AAB00717.1| 481|Caenorhabditis elegans Hypothetical pr... 30 1.8 U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 30 1.8 Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical pr... 29 3.1 U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin pro... 29 3.1 U13072-6|AAK31399.1| 327|Caenorhabditis elegans Hypothetical pr... 29 3.1 AF016672-6|AAM34394.2| 165|Caenorhabditis elegans Vig (drosophi... 29 3.1 U88180-1|AAB42294.1| 203|Caenorhabditis elegans Hypothetical pr... 29 4.1 AF016672-7|AAB66119.1| 378|Caenorhabditis elegans Vig (drosophi... 29 4.1 AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 5.4 AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 5.4 AF038606-4|AAB92026.1| 331|Caenorhabditis elegans Hypothetical ... 29 5.4 AF038606-3|AAX55701.1| 393|Caenorhabditis elegans Hypothetical ... 29 5.4 AF038606-2|AAX55700.1| 404|Caenorhabditis elegans Hypothetical ... 29 5.4 AC090999-6|AAK26143.2| 214|Caenorhabditis elegans Hypothetical ... 29 5.4 AC006670-5|AAF39912.2| 356|Caenorhabditis elegans Hypothetical ... 29 5.4 AC006670-4|AAU20843.1| 518|Caenorhabditis elegans Hypothetical ... 29 5.4 AB182367-3|BAD23998.1| 331|Caenorhabditis elegans hypothetical ... 29 5.4 AB182367-2|BAD23997.1| 393|Caenorhabditis elegans hypothetical ... 29 5.4 AB182367-1|BAD23996.1| 404|Caenorhabditis elegans hypothetical ... 29 5.4 U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 28 9.5 U40948-1|AAA81727.1| 730|Caenorhabditis elegans Gliotactin (dro... 28 9.5 U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 28 9.5 U29082-4|AAT92084.1| 279|Caenorhabditis elegans Troponin t prot... 28 9.5 U21317-6|AAA62527.1| 313|Caenorhabditis elegans Hypothetical pr... 28 9.5 AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 28 9.5 AF067608-15|AAO38679.1| 470|Caenorhabditis elegans Hypothetical... 28 9.5 AF067608-14|AAK95864.1| 551|Caenorhabditis elegans Hypothetical... 28 9.5 >U32305-11|AAL50323.1| 663|Caenorhabditis elegans Splicing factor (suppressor ofwhite apricot) related protein 1, isoform b protein. Length = 663 Score = 32.3 bits (70), Expect = 0.44 Identities = 19/65 (29%), Positives = 33/65 (50%) Frame = -2 Query: 449 D*QRQTNKSRRETSGRRGEDISSGQGERAGGHRSRQARGRPGHRTRTQPAAEGRQRTNRS 270 D R+ + R+ + RR S +R+ H+ + GR HR+R++ ++ R R NRS Sbjct: 599 DEDRERKRHRKRSRSRR-RSRSCSPRDRSREHKKSRKSGRH-HRSRSRSSSRDRHRRNRS 656 Query: 269 EADKR 255 + R Sbjct: 657 RSRDR 661 >U32305-10|AAM75378.1| 749|Caenorhabditis elegans Splicing factor (suppressor ofwhite apricot) related protein 1, isoform a protein. Length = 749 Score = 32.3 bits (70), Expect = 0.44 Identities = 19/65 (29%), Positives = 33/65 (50%) Frame = -2 Query: 449 D*QRQTNKSRRETSGRRGEDISSGQGERAGGHRSRQARGRPGHRTRTQPAAEGRQRTNRS 270 D R+ + R+ + RR S +R+ H+ + GR HR+R++ ++ R R NRS Sbjct: 685 DEDRERKRHRKRSRSRR-RSRSCSPRDRSREHKKSRKSGRH-HRSRSRSSSRDRHRRNRS 742 Query: 269 EADKR 255 + R Sbjct: 743 RSRDR 747 >U32305-9|AAM75380.1| 751|Caenorhabditis elegans Splicing factor (suppressor ofwhite apricot) related protein 1, isoform d protein. Length = 751 Score = 32.3 bits (70), Expect = 0.44 Identities = 19/65 (29%), Positives = 33/65 (50%) Frame = -2 Query: 449 D*QRQTNKSRRETSGRRGEDISSGQGERAGGHRSRQARGRPGHRTRTQPAAEGRQRTNRS 270 D R+ + R+ + RR S +R+ H+ + GR HR+R++ ++ R R NRS Sbjct: 687 DEDRERKRHRKRSRSRR-RSRSCSPRDRSREHKKSRKSGRH-HRSRSRSSSRDRHRRNRS 744 Query: 269 EADKR 255 + R Sbjct: 745 RSRDR 749 >U06932-1|AAA64937.1| 749|Caenorhabditis elegans CeSWAP protein. Length = 749 Score = 32.3 bits (70), Expect = 0.44 Identities = 19/65 (29%), Positives = 33/65 (50%) Frame = -2 Query: 449 D*QRQTNKSRRETSGRRGEDISSGQGERAGGHRSRQARGRPGHRTRTQPAAEGRQRTNRS 270 D R+ + R+ + RR S +R+ H+ + GR HR+R++ ++ R R NRS Sbjct: 685 DEDRERKRHRKRSRSRR-RSRSCSPRDRSREHKKSRKSGRH-HRSRSRSSSRDRHRRNRS 742 Query: 269 EADKR 255 + R Sbjct: 743 RSRDR 747 >U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (splicing factor) protein5, isoform d protein. Length = 208 Score = 31.1 bits (67), Expect = 1.0 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 2/60 (3%) Frame = -2 Query: 422 RRETSGRRGEDISSGQGERAGGH-RSRQARGRPGHRTRTQPAAEGRQRT-NRSEADKRDI 249 RR S RR + R+ RSR++R R R+R+ P E R+R+ +RS + KRD+ Sbjct: 89 RRSRSPRRRSRTPPRRRSRSRDRKRSRRSRSRSSSRSRS-PVRESRRRSESRSPSPKRDL 147 >U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (splicing factor) protein5, isoform a protein. Length = 208 Score = 31.1 bits (67), Expect = 1.0 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 2/60 (3%) Frame = -2 Query: 422 RRETSGRRGEDISSGQGERAGGH-RSRQARGRPGHRTRTQPAAEGRQRT-NRSEADKRDI 249 RR S RR + R+ RSR++R R R+R+ P E R+R+ +RS + KRD+ Sbjct: 89 RRSRSPRRRSRTPPRRRSRSRDRKRSRRSRSRSSSRSRS-PVRESRRRSESRSPSPKRDL 147 >AF043704-2|AAX88816.1| 407|Caenorhabditis elegans Prion-like-(q/n-rich)-domain-bearingprotein protein 72 protein. Length = 407 Score = 31.1 bits (67), Expect = 1.0 Identities = 15/30 (50%), Positives = 17/30 (56%) Frame = -2 Query: 386 SSGQGERAGGHRSRQARGRPGHRTRTQPAA 297 SS + R+ HR R R RPGHR R P A Sbjct: 143 SSPEPPRSSTHRQRIHRIRPGHRIRPSPPA 172 >Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical protein F54D5.14 protein. Length = 1130 Score = 30.7 bits (66), Expect = 1.3 Identities = 18/86 (20%), Positives = 43/86 (50%) Frame = -3 Query: 469 MQAEFAATDSDKQISRAAKLAEDAERTLAAVRESAREATEVVKHVADLATGLELSQQPKV 290 ++AE A T ++ Q+ + E+ ++ + + + E +++K+VAD+ + Q + Sbjct: 729 LRAELAQTANEDQVENLNESIEEMQKKIPLIED---EVKDILKNVADITADMAPVIQERK 785 Query: 289 DSALTEARQIRETSPVSSDDATLKRK 212 ++ T A +ET +S L+ + Sbjct: 786 EAEHTLAEIQKETRDFASKSQKLQNE 811 >Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical protein F54D5.14 protein. Length = 1130 Score = 30.7 bits (66), Expect = 1.3 Identities = 18/86 (20%), Positives = 43/86 (50%) Frame = -3 Query: 469 MQAEFAATDSDKQISRAAKLAEDAERTLAAVRESAREATEVVKHVADLATGLELSQQPKV 290 ++AE A T ++ Q+ + E+ ++ + + + E +++K+VAD+ + Q + Sbjct: 729 LRAELAQTANEDQVENLNESIEEMQKKIPLIED---EVKDILKNVADITADMAPVIQERK 785 Query: 289 DSALTEARQIRETSPVSSDDATLKRK 212 ++ T A +ET +S L+ + Sbjct: 786 EAEHTLAEIQKETRDFASKSQKLQNE 811 >U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical protein F01F1.7 protein. Length = 730 Score = 30.7 bits (66), Expect = 1.3 Identities = 20/65 (30%), Positives = 27/65 (41%) Frame = -2 Query: 440 RQTNKSRRETSGRRGEDISSGQGERAGGHRSRQARGRPGHRTRTQPAAEGRQRTNRSEAD 261 R + RRE SG R S +R GG R ++R R R R R + +E D Sbjct: 93 RDRRRDRRERSGSRDRRRRSRSRDRDGGRRRDRSRSR-DRRDRNDDRKRDRNEDSDNEED 151 Query: 260 KRDIA 246 +A Sbjct: 152 VSKMA 156 >U58761-7|AAB00717.1| 481|Caenorhabditis elegans Hypothetical protein C01F1.1 protein. Length = 481 Score = 30.3 bits (65), Expect = 1.8 Identities = 17/49 (34%), Positives = 24/49 (48%) Frame = -2 Query: 392 DISSGQGERAGGHRSRQARGRPGHRTRTQPAAEGRQRTNRSEADKRDIA 246 D S G E GG ++A+ + + +PA E RQR DK D+A Sbjct: 218 DDSDGDDEGEGGDDGKKAKNKKKKKKNAKPAKEKRQRVE----DKDDVA 262 >U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (splicing factor) protein5, isoform b protein. Length = 166 Score = 30.3 bits (65), Expect = 1.8 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 2/59 (3%) Frame = -2 Query: 422 RRETSGRRGEDISSGQGERAGGH-RSRQARGRPGHRTRTQPAAEGRQRT-NRSEADKRD 252 RR S RR + R+ RSR++R R R+R+ P E R+R+ +RS + KRD Sbjct: 89 RRSRSPRRRSRTPPRRRSRSRDRKRSRRSRSRSSSRSRS-PVRESRRRSESRSPSPKRD 146 >Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical protein F33A8.1 protein. Length = 897 Score = 29.5 bits (63), Expect = 3.1 Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 4/71 (5%) Frame = -2 Query: 452 GD*QRQTNKSRR----ETSGRRGEDISSGQGERAGGHRSRQARGRPGHRTRTQPAAEGRQ 285 GD ++ +K RR + R+G + GER G R R+ R + R + Sbjct: 796 GDDRKDRSKDRRRQDSDDEDRKGRERREDSGERRRGDRDRRDRNKDQEDHREDRRDRSKD 855 Query: 284 RTNRSEADKRD 252 R +R + + D Sbjct: 856 REDRRDRRRHD 866 >U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin protein. Length = 897 Score = 29.5 bits (63), Expect = 3.1 Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 4/71 (5%) Frame = -2 Query: 452 GD*QRQTNKSRR----ETSGRRGEDISSGQGERAGGHRSRQARGRPGHRTRTQPAAEGRQ 285 GD ++ +K RR + R+G + GER G R R+ R + R + Sbjct: 796 GDDRKDRSKDRRRQDSDDEDRKGRERREDSGERRRGDRDRRDRNKDQEDHREDRRDRSKD 855 Query: 284 RTNRSEADKRD 252 R +R + + D Sbjct: 856 REDRRDRRRHD 866 >U13072-6|AAK31399.1| 327|Caenorhabditis elegans Hypothetical protein C07D10.1 protein. Length = 327 Score = 29.5 bits (63), Expect = 3.1 Identities = 19/61 (31%), Positives = 32/61 (52%) Frame = -3 Query: 721 EFSRS*QTGQGGLVLHDATPQLHIQSNRTASSKSRAIETVDIGEVTSSIKTLETSAKNLL 542 +F S ++GQ ++ D + + N+T S K + IE +I +VT S T+ S + L Sbjct: 186 DFVGSSESGQSSGLVFDDNAVIQLMKNQTGSRKIQKIELFNI-KVTVSRHTMIESLRKLA 244 Query: 541 R 539 R Sbjct: 245 R 245 >AF016672-6|AAM34394.2| 165|Caenorhabditis elegans Vig (drosophila vasa intronic gene)ortholog protein 1, isoform b protein. Length = 165 Score = 29.5 bits (63), Expect = 3.1 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = -2 Query: 401 RGEDISSGQGERAGGHRSRQARGRPGHRTRTQPAAEG 291 RGE +S+ G+R G R R G R +PA G Sbjct: 27 RGERVSNENGDRPQGENRRGGPRRGGERGAARPAGRG 63 >U88180-1|AAB42294.1| 203|Caenorhabditis elegans Hypothetical protein T27A3.4 protein. Length = 203 Score = 29.1 bits (62), Expect = 4.1 Identities = 15/55 (27%), Positives = 24/55 (43%) Frame = -2 Query: 419 RETSGRRGEDISSGQGERAGGHRSRQARGRPGHRTRTQPAAEGRQRTNRSEADKR 255 R + GRR S G S+++R R RTR+ + R R+ + +R Sbjct: 106 RGSKGRRSSSRGSVYGRTGRSRSSKRSRSRSRPRTRSGSRSSSRSRSGSRRSSRR 160 >AF016672-7|AAB66119.1| 378|Caenorhabditis elegans Vig (drosophila vasa intronic gene)ortholog protein 1, isoform a protein. Length = 378 Score = 29.1 bits (62), Expect = 4.1 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 5/58 (8%) Frame = -2 Query: 404 RRGEDISSGQGERAGGHRSRQARGRPGHRTRTQPAAEGRQ----RTNR-SEADKRDIA 246 R GE +S+ G+R G R R G R +PA G + R NR E K++++ Sbjct: 86 RDGERVSNENGDRPQGENRRGGPRRGGERGAARPAGRGGRGGFTRENREGEEPKQEVS 143 >AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical protein Y116A8C.32 protein. Length = 699 Score = 28.7 bits (61), Expect = 5.4 Identities = 16/65 (24%), Positives = 29/65 (44%) Frame = -2 Query: 449 D*QRQTNKSRRETSGRRGEDISSGQGERAGGHRSRQARGRPGHRTRTQPAAEGRQRTNRS 270 D R ++ R++ ++ + R+ RSR R R R R + + +R +RS Sbjct: 67 DRSRSRDRDRKKDRKKKDRSRERDRERRSSRSRSRSPRDRDRERRRRRSRSPPPRRRSRS 126 Query: 269 EADKR 255 D+R Sbjct: 127 GGDRR 131 >AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein protein. Length = 699 Score = 28.7 bits (61), Expect = 5.4 Identities = 16/65 (24%), Positives = 29/65 (44%) Frame = -2 Query: 449 D*QRQTNKSRRETSGRRGEDISSGQGERAGGHRSRQARGRPGHRTRTQPAAEGRQRTNRS 270 D R ++ R++ ++ + R+ RSR R R R R + + +R +RS Sbjct: 67 DRSRSRDRDRKKDRKKKDRSRERDRERRSSRSRSRSPRDRDRERRRRRSRSPPPRRRSRS 126 Query: 269 EADKR 255 D+R Sbjct: 127 GGDRR 131 >AF038606-4|AAB92026.1| 331|Caenorhabditis elegans Hypothetical protein C04C3.5a protein. Length = 331 Score = 28.7 bits (61), Expect = 5.4 Identities = 18/69 (26%), Positives = 33/69 (47%) Frame = -3 Query: 460 EFAATDSDKQISRAAKLAEDAERTLAAVRESAREATEVVKHVADLATGLELSQQPKVDSA 281 EF + ++ SRA LAE AE+ L A ++ + TE + + + E K++ Sbjct: 87 EFISQQHERAASRAVPLAE-AEKVLQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK 145 Query: 280 LTEARQIRE 254 E Q+++ Sbjct: 146 KREYEQLQK 154 >AF038606-3|AAX55701.1| 393|Caenorhabditis elegans Hypothetical protein C04C3.5c protein. Length = 393 Score = 28.7 bits (61), Expect = 5.4 Identities = 18/69 (26%), Positives = 33/69 (47%) Frame = -3 Query: 460 EFAATDSDKQISRAAKLAEDAERTLAAVRESAREATEVVKHVADLATGLELSQQPKVDSA 281 EF + ++ SRA LAE AE+ L A ++ + TE + + + E K++ Sbjct: 149 EFISQQHERAASRAVPLAE-AEKVLQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK 207 Query: 280 LTEARQIRE 254 E Q+++ Sbjct: 208 KREYEQLQK 216 >AF038606-2|AAX55700.1| 404|Caenorhabditis elegans Hypothetical protein C04C3.5b protein. Length = 404 Score = 28.7 bits (61), Expect = 5.4 Identities = 18/69 (26%), Positives = 33/69 (47%) Frame = -3 Query: 460 EFAATDSDKQISRAAKLAEDAERTLAAVRESAREATEVVKHVADLATGLELSQQPKVDSA 281 EF + ++ SRA LAE AE+ L A ++ + TE + + + E K++ Sbjct: 160 EFISQQHERAASRAVPLAE-AEKVLQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK 218 Query: 280 LTEARQIRE 254 E Q+++ Sbjct: 219 KREYEQLQK 227 >AC090999-6|AAK26143.2| 214|Caenorhabditis elegans Hypothetical protein Y82E9BR.11 protein. Length = 214 Score = 28.7 bits (61), Expect = 5.4 Identities = 18/65 (27%), Positives = 35/65 (53%) Frame = -3 Query: 682 VLHDATPQLHIQSNRTASSKSRAIETVDIGEVTSSIKTLETSAKNLLRSVSLLNIYTYFF 503 V+HDA Q H++ + +++ + V + E+ +T+E+SAK LL + + Y Sbjct: 69 VVHDAD-QKHVREYGNLAKETKILLEVALNELYE--ETMESSAKMLLEELKCARLVFYSL 125 Query: 502 FKLCI 488 ++ CI Sbjct: 126 YR-CI 129 >AC006670-5|AAF39912.2| 356|Caenorhabditis elegans Hypothetical protein K07A3.3a protein. Length = 356 Score = 28.7 bits (61), Expect = 5.4 Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 2/67 (2%) Frame = -2 Query: 341 ARGRPGHRTRTQPAAEGRQRTNRSEADKRDI-AGKF**-CDSKAKVVSSNFL*PPRLIQN 168 A P +TR A Q+ R +D+R I A KF DS A V F+ +QN Sbjct: 14 ASANPSIQTRCISIARIDQKIKRGNSDRRVIHAKKFTKQTDSPASVAGDGFILSKTFLQN 73 Query: 167 KIYCNPP 147 I PP Sbjct: 74 AIAHQPP 80 >AC006670-4|AAU20843.1| 518|Caenorhabditis elegans Hypothetical protein K07A3.3b protein. Length = 518 Score = 28.7 bits (61), Expect = 5.4 Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 2/67 (2%) Frame = -2 Query: 341 ARGRPGHRTRTQPAAEGRQRTNRSEADKRDI-AGKF**-CDSKAKVVSSNFL*PPRLIQN 168 A P +TR A Q+ R +D+R I A KF DS A V F+ +QN Sbjct: 14 ASANPSIQTRCISIARIDQKIKRGNSDRRVIHAKKFTKQTDSPASVAGDGFILSKTFLQN 73 Query: 167 KIYCNPP 147 I PP Sbjct: 74 AIAHQPP 80 >AB182367-3|BAD23998.1| 331|Caenorhabditis elegans hypothetical protein protein. Length = 331 Score = 28.7 bits (61), Expect = 5.4 Identities = 18/69 (26%), Positives = 33/69 (47%) Frame = -3 Query: 460 EFAATDSDKQISRAAKLAEDAERTLAAVRESAREATEVVKHVADLATGLELSQQPKVDSA 281 EF + ++ SRA LAE AE+ L A ++ + TE + + + E K++ Sbjct: 87 EFISQQHERAASRAVPLAE-AEKVLQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK 145 Query: 280 LTEARQIRE 254 E Q+++ Sbjct: 146 KREYEQLQK 154 >AB182367-2|BAD23997.1| 393|Caenorhabditis elegans hypothetical protein protein. Length = 393 Score = 28.7 bits (61), Expect = 5.4 Identities = 18/69 (26%), Positives = 33/69 (47%) Frame = -3 Query: 460 EFAATDSDKQISRAAKLAEDAERTLAAVRESAREATEVVKHVADLATGLELSQQPKVDSA 281 EF + ++ SRA LAE AE+ L A ++ + TE + + + E K++ Sbjct: 149 EFISQQHERAASRAVPLAE-AEKVLQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK 207 Query: 280 LTEARQIRE 254 E Q+++ Sbjct: 208 KREYEQLQK 216 >AB182367-1|BAD23996.1| 404|Caenorhabditis elegans hypothetical protein protein. Length = 404 Score = 28.7 bits (61), Expect = 5.4 Identities = 18/69 (26%), Positives = 33/69 (47%) Frame = -3 Query: 460 EFAATDSDKQISRAAKLAEDAERTLAAVRESAREATEVVKHVADLATGLELSQQPKVDSA 281 EF + ++ SRA LAE AE+ L A ++ + TE + + + E K++ Sbjct: 160 EFISQQHERAASRAVPLAE-AEKVLQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK 218 Query: 280 LTEARQIRE 254 E Q+++ Sbjct: 219 KREYEQLQK 227 >U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated protein 44, isoform f protein. Length = 6994 Score = 27.9 bits (59), Expect = 9.5 Identities = 17/49 (34%), Positives = 28/49 (57%) Frame = -3 Query: 376 RESAREATEVVKHVADLATGLELSQQPKVDSALTEARQIRETSPVSSDD 230 RES E+ + VKH + T +++Q D EA +IR SPV++++ Sbjct: 3601 RESPVESEKSVKHTTETTTTTTVTRQLYDD----EASEIRGESPVATEE 3645 >U40948-1|AAA81727.1| 730|Caenorhabditis elegans Gliotactin (drosophila neuroligin-like) homolog protein 1 protein. Length = 730 Score = 27.9 bits (59), Expect = 9.5 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = -3 Query: 760 FYHGSNFLLGSANEFSRS*QTGQGGLVL 677 F+HG NF GSANE+ +G +V+ Sbjct: 195 FFHGGNFQTGSANEWPAHGLASRGMVVV 222 >U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin protein. Length = 6994 Score = 27.9 bits (59), Expect = 9.5 Identities = 17/49 (34%), Positives = 28/49 (57%) Frame = -3 Query: 376 RESAREATEVVKHVADLATGLELSQQPKVDSALTEARQIRETSPVSSDD 230 RES E+ + VKH + T +++Q D EA +IR SPV++++ Sbjct: 3601 RESPVESEKSVKHTTETTTTTTVTRQLYDD----EASEIRGESPVATEE 3645 >U29082-4|AAT92084.1| 279|Caenorhabditis elegans Troponin t protein 3, isoform c protein. Length = 279 Score = 27.9 bits (59), Expect = 9.5 Identities = 20/62 (32%), Positives = 26/62 (41%) Frame = -2 Query: 455 CGD*QRQTNKSRRETSGRRGEDISSGQGERAGGHRSRQARGRPGHRTRTQPAAEGRQRTN 276 CG+ QR T + R T G+D G R R+ R R RT + E QR + Sbjct: 210 CGNSQRNTKRIRSSTKRAEGQD--KGASSENMQTRDREVRSRETSRT-ARVRHERAQRAS 266 Query: 275 RS 270 S Sbjct: 267 TS 268 >U21317-6|AAA62527.1| 313|Caenorhabditis elegans Hypothetical protein B0495.8a protein. Length = 313 Score = 27.9 bits (59), Expect = 9.5 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Frame = -2 Query: 443 QRQTNKSRRETSGRRGEDISSGQGERAGGHRSRQARGRPGHRTRTQPAAE-GRQRTNRSE 267 QR+ + RR+ G RGE +G+R R R+ R R R R+ + G +R +R Sbjct: 251 QRRESYGRRDRGGDRGE----YRGDR---DRDRRNRDRSRSRDRSYRRDDRGDRRYDRDN 303 Query: 266 ADKRD 252 D+RD Sbjct: 304 RDRRD 308 >AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical protein W03G1.5 protein. Length = 471 Score = 27.9 bits (59), Expect = 9.5 Identities = 18/59 (30%), Positives = 22/59 (37%) Frame = -2 Query: 464 GGICGD*QRQTNKSRRETSGRRGEDISSGQGERAGGHRSRQARGRPGHRTRTQPAAEGR 288 GG G R ++S GR G G G R+G R G GH + GR Sbjct: 233 GGRRGHGGRHGSRSG-SPGGRHGHGGHGGHGSRSGSPGGRHGHGGSGHHRGGRHGGHGR 290 >AF067608-15|AAO38679.1| 470|Caenorhabditis elegans Hypothetical protein B0511.14b protein. Length = 470 Score = 27.9 bits (59), Expect = 9.5 Identities = 20/79 (25%), Positives = 34/79 (43%) Frame = -3 Query: 442 SDKQISRAAKLAEDAERTLAAVRESAREATEVVKHVADLATGLELSQQPKVDSALTEARQ 263 SD I + K E + +RE R ++ + V + E P SAL + + Sbjct: 321 SDPTIRKKGKTDEQLDHYHEKIREKYRNIQKIQEGVEEEDEDEEDDDMPSTSSALPSSSR 380 Query: 262 IRETSPVSSDDATLKRKSY 206 R++ SS AT +++ Y Sbjct: 381 -RQSRRRSSTGATNRKRKY 398 >AF067608-14|AAK95864.1| 551|Caenorhabditis elegans Hypothetical protein B0511.14a protein. Length = 551 Score = 27.9 bits (59), Expect = 9.5 Identities = 20/79 (25%), Positives = 34/79 (43%) Frame = -3 Query: 442 SDKQISRAAKLAEDAERTLAAVRESAREATEVVKHVADLATGLELSQQPKVDSALTEARQ 263 SD I + K E + +RE R ++ + V + E P SAL + + Sbjct: 321 SDPTIRKKGKTDEQLDHYHEKIREKYRNIQKIQEGVEEEDEDEEDDDMPSTSSALPSSSR 380 Query: 262 IRETSPVSSDDATLKRKSY 206 R++ SS AT +++ Y Sbjct: 381 -RQSRRRSSTGATNRKRKY 398 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,948,704 Number of Sequences: 27780 Number of extensions: 304679 Number of successful extensions: 1076 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 999 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1075 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 2072006206 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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