Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1362
(846 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ062782-1|AAY56655.1| 465|Drosophila melanogaster HMG coenzyme... 118 1e-26
AY051743-1|AAK93167.1| 465|Drosophila melanogaster LD26976p pro... 118 1e-26
AE013599-2260|AAM68518.1| 465|Drosophila melanogaster CG4311-PE... 118 1e-26
AE013599-2259|AAM68517.1| 465|Drosophila melanogaster CG4311-PD... 118 1e-26
AE013599-2258|AAM68516.1| 465|Drosophila melanogaster CG4311-PC... 118 1e-26
AE013599-2257|AAF58010.1| 465|Drosophila melanogaster CG4311-PB... 118 1e-26
AE013599-2256|AAF58009.1| 465|Drosophila melanogaster CG4311-PA... 118 1e-26
>DQ062782-1|AAY56655.1| 465|Drosophila melanogaster HMG coenzyme
asynthase protein.
Length = 465
Score = 118 bits (284), Expect = 1e-26
Identities = 54/87 (62%), Positives = 65/87 (74%), Gaps = 4/87 (4%)
Frame = +3
Query: 3 YMTHAYDFYKPDLSSEFPYVDGKLSIQCYLNALDNCYNLFSKK----MRKTDPNFKGLLS 170
+M HAYDFYKPDLSSE+P VDGKLSIQCYL+ALD CY L+ KK + T L +
Sbjct: 189 HMEHAYDFYKPDLSSEYPTVDGKLSIQCYLSALDTCYRLYRKKFDQQQKDTSKQPASLST 248
Query: 171 LDGMLFHSPYCKLVQKSLARVCFNDFL 251
D +LFH+P+CKLVQKS+ R+ FNDFL
Sbjct: 249 FDAILFHTPFCKLVQKSVGRLSFNDFL 275
Score = 111 bits (267), Expect = 1e-24
Identities = 53/101 (52%), Positives = 69/101 (68%)
Frame = +1
Query: 499 EEVSLFSYGSGLASTMYSINVCHDMSTGSKLEKLISSLHETVALLDKRQSVEPSKFSDIM 678
+ + LFSYGSGLA++MYSI+V D + EK +S L LL+ R+ V P +FS +M
Sbjct: 359 KRIGLFSYGSGLAASMYSISVTQDAAA---FEKFVSQLDYVQPLLNSREKVAPEQFSALM 415
Query: 679 DVRTKNYHSAPYEPTGSLDVLFPGTYYL*KIDDQRRRTYDR 801
+VR KN H+APY PTGS+ LFPGTYYL +D RRTY+R
Sbjct: 416 EVREKNNHAAPYTPTGSISALFPGTYYLKDVDALHRRTYER 456
Score = 105 bits (253), Expect = 6e-23
Identities = 51/85 (60%), Positives = 60/85 (70%)
Frame = +2
Query: 263 EEREKQFPGLSEFSNHKLEDTYFDREVEKAFMTYSLSLFEEKTKPSLHIARNVGNMYTPS 442
EER KQFP L F+ LE TYFDR+VEKAFMT S ++F KTK SL +A VGNMYTPS
Sbjct: 280 EERTKQFPDLERFNTATLESTYFDRDVEKAFMTQSANIFASKTKKSLLLANQVGNMYTPS 339
Query: 443 LYGGLVSYLISKSPDQLIGKKFLCF 517
+Y GLVS LIS +L+GK+ F
Sbjct: 340 VYSGLVSLLISGPAQELVGKRIGLF 364
>AY051743-1|AAK93167.1| 465|Drosophila melanogaster LD26976p
protein.
Length = 465
Score = 118 bits (284), Expect = 1e-26
Identities = 54/87 (62%), Positives = 65/87 (74%), Gaps = 4/87 (4%)
Frame = +3
Query: 3 YMTHAYDFYKPDLSSEFPYVDGKLSIQCYLNALDNCYNLFSKK----MRKTDPNFKGLLS 170
+M HAYDFYKPDLSSE+P VDGKLSIQCYL+ALD CY L+ KK + T L +
Sbjct: 189 HMEHAYDFYKPDLSSEYPTVDGKLSIQCYLSALDTCYRLYRKKFDQQQKDTSKQPASLST 248
Query: 171 LDGMLFHSPYCKLVQKSLARVCFNDFL 251
D +LFH+P+CKLVQKS+ R+ FNDFL
Sbjct: 249 FDAILFHTPFCKLVQKSVGRLSFNDFL 275
Score = 111 bits (267), Expect = 1e-24
Identities = 53/101 (52%), Positives = 69/101 (68%)
Frame = +1
Query: 499 EEVSLFSYGSGLASTMYSINVCHDMSTGSKLEKLISSLHETVALLDKRQSVEPSKFSDIM 678
+ + LFSYGSGLA++MYSI+V D + EK +S L LL+ R+ V P +FS +M
Sbjct: 359 KRIGLFSYGSGLAASMYSISVTQDAAA---FEKFVSQLDYVQPLLNSREKVAPEQFSALM 415
Query: 679 DVRTKNYHSAPYEPTGSLDVLFPGTYYL*KIDDQRRRTYDR 801
+VR KN H+APY PTGS+ LFPGTYYL +D RRTY+R
Sbjct: 416 EVREKNNHAAPYTPTGSISALFPGTYYLKDVDALHRRTYER 456
Score = 105 bits (253), Expect = 6e-23
Identities = 51/85 (60%), Positives = 60/85 (70%)
Frame = +2
Query: 263 EEREKQFPGLSEFSNHKLEDTYFDREVEKAFMTYSLSLFEEKTKPSLHIARNVGNMYTPS 442
EER KQFP L F+ LE TYFDR+VEKAFMT S ++F KTK SL +A VGNMYTPS
Sbjct: 280 EERTKQFPDLERFNTATLESTYFDRDVEKAFMTQSANIFASKTKKSLLLANQVGNMYTPS 339
Query: 443 LYGGLVSYLISKSPDQLIGKKFLCF 517
+Y GLVS LIS +L+GK+ F
Sbjct: 340 VYSGLVSLLISGPAQELVGKRIGLF 364
>AE013599-2260|AAM68518.1| 465|Drosophila melanogaster CG4311-PE,
isoform E protein.
Length = 465
Score = 118 bits (284), Expect = 1e-26
Identities = 54/87 (62%), Positives = 65/87 (74%), Gaps = 4/87 (4%)
Frame = +3
Query: 3 YMTHAYDFYKPDLSSEFPYVDGKLSIQCYLNALDNCYNLFSKK----MRKTDPNFKGLLS 170
+M HAYDFYKPDLSSE+P VDGKLSIQCYL+ALD CY L+ KK + T L +
Sbjct: 189 HMEHAYDFYKPDLSSEYPTVDGKLSIQCYLSALDTCYRLYRKKFDQQQKDTSKQPASLST 248
Query: 171 LDGMLFHSPYCKLVQKSLARVCFNDFL 251
D +LFH+P+CKLVQKS+ R+ FNDFL
Sbjct: 249 FDAILFHTPFCKLVQKSVGRLSFNDFL 275
Score = 111 bits (267), Expect = 1e-24
Identities = 53/101 (52%), Positives = 69/101 (68%)
Frame = +1
Query: 499 EEVSLFSYGSGLASTMYSINVCHDMSTGSKLEKLISSLHETVALLDKRQSVEPSKFSDIM 678
+ + LFSYGSGLA++MYSI+V D + EK +S L LL+ R+ V P +FS +M
Sbjct: 359 KRIGLFSYGSGLAASMYSISVTQDAAA---FEKFVSQLDYVQPLLNSREKVAPEQFSALM 415
Query: 679 DVRTKNYHSAPYEPTGSLDVLFPGTYYL*KIDDQRRRTYDR 801
+VR KN H+APY PTGS+ LFPGTYYL +D RRTY+R
Sbjct: 416 EVREKNNHAAPYTPTGSISALFPGTYYLKDVDALHRRTYER 456
Score = 105 bits (253), Expect = 6e-23
Identities = 51/85 (60%), Positives = 60/85 (70%)
Frame = +2
Query: 263 EEREKQFPGLSEFSNHKLEDTYFDREVEKAFMTYSLSLFEEKTKPSLHIARNVGNMYTPS 442
EER KQFP L F+ LE TYFDR+VEKAFMT S ++F KTK SL +A VGNMYTPS
Sbjct: 280 EERTKQFPDLERFNTATLESTYFDRDVEKAFMTQSANIFASKTKKSLLLANQVGNMYTPS 339
Query: 443 LYGGLVSYLISKSPDQLIGKKFLCF 517
+Y GLVS LIS +L+GK+ F
Sbjct: 340 VYSGLVSLLISGPAQELVGKRIGLF 364
>AE013599-2259|AAM68517.1| 465|Drosophila melanogaster CG4311-PD,
isoform D protein.
Length = 465
Score = 118 bits (284), Expect = 1e-26
Identities = 54/87 (62%), Positives = 65/87 (74%), Gaps = 4/87 (4%)
Frame = +3
Query: 3 YMTHAYDFYKPDLSSEFPYVDGKLSIQCYLNALDNCYNLFSKK----MRKTDPNFKGLLS 170
+M HAYDFYKPDLSSE+P VDGKLSIQCYL+ALD CY L+ KK + T L +
Sbjct: 189 HMEHAYDFYKPDLSSEYPTVDGKLSIQCYLSALDTCYRLYRKKFDQQQKDTSKQPASLST 248
Query: 171 LDGMLFHSPYCKLVQKSLARVCFNDFL 251
D +LFH+P+CKLVQKS+ R+ FNDFL
Sbjct: 249 FDAILFHTPFCKLVQKSVGRLSFNDFL 275
Score = 111 bits (267), Expect = 1e-24
Identities = 53/101 (52%), Positives = 69/101 (68%)
Frame = +1
Query: 499 EEVSLFSYGSGLASTMYSINVCHDMSTGSKLEKLISSLHETVALLDKRQSVEPSKFSDIM 678
+ + LFSYGSGLA++MYSI+V D + EK +S L LL+ R+ V P +FS +M
Sbjct: 359 KRIGLFSYGSGLAASMYSISVTQDAAA---FEKFVSQLDYVQPLLNSREKVAPEQFSALM 415
Query: 679 DVRTKNYHSAPYEPTGSLDVLFPGTYYL*KIDDQRRRTYDR 801
+VR KN H+APY PTGS+ LFPGTYYL +D RRTY+R
Sbjct: 416 EVREKNNHAAPYTPTGSISALFPGTYYLKDVDALHRRTYER 456
Score = 105 bits (253), Expect = 6e-23
Identities = 51/85 (60%), Positives = 60/85 (70%)
Frame = +2
Query: 263 EEREKQFPGLSEFSNHKLEDTYFDREVEKAFMTYSLSLFEEKTKPSLHIARNVGNMYTPS 442
EER KQFP L F+ LE TYFDR+VEKAFMT S ++F KTK SL +A VGNMYTPS
Sbjct: 280 EERTKQFPDLERFNTATLESTYFDRDVEKAFMTQSANIFASKTKKSLLLANQVGNMYTPS 339
Query: 443 LYGGLVSYLISKSPDQLIGKKFLCF 517
+Y GLVS LIS +L+GK+ F
Sbjct: 340 VYSGLVSLLISGPAQELVGKRIGLF 364
>AE013599-2258|AAM68516.1| 465|Drosophila melanogaster CG4311-PC,
isoform C protein.
Length = 465
Score = 118 bits (284), Expect = 1e-26
Identities = 54/87 (62%), Positives = 65/87 (74%), Gaps = 4/87 (4%)
Frame = +3
Query: 3 YMTHAYDFYKPDLSSEFPYVDGKLSIQCYLNALDNCYNLFSKK----MRKTDPNFKGLLS 170
+M HAYDFYKPDLSSE+P VDGKLSIQCYL+ALD CY L+ KK + T L +
Sbjct: 189 HMEHAYDFYKPDLSSEYPTVDGKLSIQCYLSALDTCYRLYRKKFDQQQKDTSKQPASLST 248
Query: 171 LDGMLFHSPYCKLVQKSLARVCFNDFL 251
D +LFH+P+CKLVQKS+ R+ FNDFL
Sbjct: 249 FDAILFHTPFCKLVQKSVGRLSFNDFL 275
Score = 111 bits (267), Expect = 1e-24
Identities = 53/101 (52%), Positives = 69/101 (68%)
Frame = +1
Query: 499 EEVSLFSYGSGLASTMYSINVCHDMSTGSKLEKLISSLHETVALLDKRQSVEPSKFSDIM 678
+ + LFSYGSGLA++MYSI+V D + EK +S L LL+ R+ V P +FS +M
Sbjct: 359 KRIGLFSYGSGLAASMYSISVTQDAAA---FEKFVSQLDYVQPLLNSREKVAPEQFSALM 415
Query: 679 DVRTKNYHSAPYEPTGSLDVLFPGTYYL*KIDDQRRRTYDR 801
+VR KN H+APY PTGS+ LFPGTYYL +D RRTY+R
Sbjct: 416 EVREKNNHAAPYTPTGSISALFPGTYYLKDVDALHRRTYER 456
Score = 105 bits (253), Expect = 6e-23
Identities = 51/85 (60%), Positives = 60/85 (70%)
Frame = +2
Query: 263 EEREKQFPGLSEFSNHKLEDTYFDREVEKAFMTYSLSLFEEKTKPSLHIARNVGNMYTPS 442
EER KQFP L F+ LE TYFDR+VEKAFMT S ++F KTK SL +A VGNMYTPS
Sbjct: 280 EERTKQFPDLERFNTATLESTYFDRDVEKAFMTQSANIFASKTKKSLLLANQVGNMYTPS 339
Query: 443 LYGGLVSYLISKSPDQLIGKKFLCF 517
+Y GLVS LIS +L+GK+ F
Sbjct: 340 VYSGLVSLLISGPAQELVGKRIGLF 364
>AE013599-2257|AAF58010.1| 465|Drosophila melanogaster CG4311-PB,
isoform B protein.
Length = 465
Score = 118 bits (284), Expect = 1e-26
Identities = 54/87 (62%), Positives = 65/87 (74%), Gaps = 4/87 (4%)
Frame = +3
Query: 3 YMTHAYDFYKPDLSSEFPYVDGKLSIQCYLNALDNCYNLFSKK----MRKTDPNFKGLLS 170
+M HAYDFYKPDLSSE+P VDGKLSIQCYL+ALD CY L+ KK + T L +
Sbjct: 189 HMEHAYDFYKPDLSSEYPTVDGKLSIQCYLSALDTCYRLYRKKFDQQQKDTSKQPASLST 248
Query: 171 LDGMLFHSPYCKLVQKSLARVCFNDFL 251
D +LFH+P+CKLVQKS+ R+ FNDFL
Sbjct: 249 FDAILFHTPFCKLVQKSVGRLSFNDFL 275
Score = 111 bits (267), Expect = 1e-24
Identities = 53/101 (52%), Positives = 69/101 (68%)
Frame = +1
Query: 499 EEVSLFSYGSGLASTMYSINVCHDMSTGSKLEKLISSLHETVALLDKRQSVEPSKFSDIM 678
+ + LFSYGSGLA++MYSI+V D + EK +S L LL+ R+ V P +FS +M
Sbjct: 359 KRIGLFSYGSGLAASMYSISVTQDAAA---FEKFVSQLDYVQPLLNSREKVAPEQFSALM 415
Query: 679 DVRTKNYHSAPYEPTGSLDVLFPGTYYL*KIDDQRRRTYDR 801
+VR KN H+APY PTGS+ LFPGTYYL +D RRTY+R
Sbjct: 416 EVREKNNHAAPYTPTGSISALFPGTYYLKDVDALHRRTYER 456
Score = 105 bits (253), Expect = 6e-23
Identities = 51/85 (60%), Positives = 60/85 (70%)
Frame = +2
Query: 263 EEREKQFPGLSEFSNHKLEDTYFDREVEKAFMTYSLSLFEEKTKPSLHIARNVGNMYTPS 442
EER KQFP L F+ LE TYFDR+VEKAFMT S ++F KTK SL +A VGNMYTPS
Sbjct: 280 EERTKQFPDLERFNTATLESTYFDRDVEKAFMTQSANIFASKTKKSLLLANQVGNMYTPS 339
Query: 443 LYGGLVSYLISKSPDQLIGKKFLCF 517
+Y GLVS LIS +L+GK+ F
Sbjct: 340 VYSGLVSLLISGPAQELVGKRIGLF 364
>AE013599-2256|AAF58009.1| 465|Drosophila melanogaster CG4311-PA,
isoform A protein.
Length = 465
Score = 118 bits (284), Expect = 1e-26
Identities = 54/87 (62%), Positives = 65/87 (74%), Gaps = 4/87 (4%)
Frame = +3
Query: 3 YMTHAYDFYKPDLSSEFPYVDGKLSIQCYLNALDNCYNLFSKK----MRKTDPNFKGLLS 170
+M HAYDFYKPDLSSE+P VDGKLSIQCYL+ALD CY L+ KK + T L +
Sbjct: 189 HMEHAYDFYKPDLSSEYPTVDGKLSIQCYLSALDTCYRLYRKKFDQQQKDTSKQPASLST 248
Query: 171 LDGMLFHSPYCKLVQKSLARVCFNDFL 251
D +LFH+P+CKLVQKS+ R+ FNDFL
Sbjct: 249 FDAILFHTPFCKLVQKSVGRLSFNDFL 275
Score = 111 bits (267), Expect = 1e-24
Identities = 53/101 (52%), Positives = 69/101 (68%)
Frame = +1
Query: 499 EEVSLFSYGSGLASTMYSINVCHDMSTGSKLEKLISSLHETVALLDKRQSVEPSKFSDIM 678
+ + LFSYGSGLA++MYSI+V D + EK +S L LL+ R+ V P +FS +M
Sbjct: 359 KRIGLFSYGSGLAASMYSISVTQDAAA---FEKFVSQLDYVQPLLNSREKVAPEQFSALM 415
Query: 679 DVRTKNYHSAPYEPTGSLDVLFPGTYYL*KIDDQRRRTYDR 801
+VR KN H+APY PTGS+ LFPGTYYL +D RRTY+R
Sbjct: 416 EVREKNNHAAPYTPTGSISALFPGTYYLKDVDALHRRTYER 456
Score = 105 bits (253), Expect = 6e-23
Identities = 51/85 (60%), Positives = 60/85 (70%)
Frame = +2
Query: 263 EEREKQFPGLSEFSNHKLEDTYFDREVEKAFMTYSLSLFEEKTKPSLHIARNVGNMYTPS 442
EER KQFP L F+ LE TYFDR+VEKAFMT S ++F KTK SL +A VGNMYTPS
Sbjct: 280 EERTKQFPDLERFNTATLESTYFDRDVEKAFMTQSANIFASKTKKSLLLANQVGNMYTPS 339
Query: 443 LYGGLVSYLISKSPDQLIGKKFLCF 517
+Y GLVS LIS +L+GK+ F
Sbjct: 340 VYSGLVSLLISGPAQELVGKRIGLF 364
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,898,476
Number of Sequences: 53049
Number of extensions: 721830
Number of successful extensions: 1495
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1481
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4044853644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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