Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1361
         (704 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061367-1|AAL28915.1|  598|Drosophila melanogaster LD29161p pro...    31   2.0  
AE014135-129|AAN06512.1|  598|Drosophila melanogaster CG1838-PD,...    31   2.0  
AE014135-128|AAN06511.1|  598|Drosophila melanogaster CG1838-PC,...    31   2.0  
AE014135-127|AAN06510.1|  598|Drosophila melanogaster CG1838-PB,...    31   2.0  
AE014135-126|AAF59319.1|  598|Drosophila melanogaster CG1838-PA,...    31   2.0  
AF132814-1|AAD24472.1|  598|Drosophila melanogaster myoglianin p...    29   4.7  
AY113489-1|AAM29494.1|  427|Drosophila melanogaster RE47112p pro...    29   8.1  
AE014134-1777|AAF52871.2|  413|Drosophila melanogaster CG5731-PA...    29   8.1  

>AY061367-1|AAL28915.1|  598|Drosophila melanogaster LD29161p
           protein.
          Length = 598

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 18/65 (27%), Positives = 31/65 (47%)
 Frame = -3

Query: 588 LISRSVKRLSDIVHSKGLTLNLI*HCYLNYNLTSYRTGWERRDVRALKLHAIGGKYSDLY 409
           L+  ++K+L +I     +  N+I + Y +YN +S  T W R +       +I   Y D  
Sbjct: 215 LMRLNLKKLPNITKPISVPQNIIDNFYRDYNASSKTTVWNRMESIDESHLSINDTYGDHI 274

Query: 408 SYDYF 394
             D+F
Sbjct: 275 MTDFF 279


>AE014135-129|AAN06512.1|  598|Drosophila melanogaster CG1838-PD,
           isoform D protein.
          Length = 598

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 18/65 (27%), Positives = 31/65 (47%)
 Frame = -3

Query: 588 LISRSVKRLSDIVHSKGLTLNLI*HCYLNYNLTSYRTGWERRDVRALKLHAIGGKYSDLY 409
           L+  ++K+L +I     +  N+I + Y +YN +S  T W R +       +I   Y D  
Sbjct: 215 LMRLNLKKLPNITKPISVPQNIIDNFYRDYNASSKTTVWNRMESIDESHLSINDTYGDHI 274

Query: 408 SYDYF 394
             D+F
Sbjct: 275 MTDFF 279


>AE014135-128|AAN06511.1|  598|Drosophila melanogaster CG1838-PC,
           isoform C protein.
          Length = 598

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 18/65 (27%), Positives = 31/65 (47%)
 Frame = -3

Query: 588 LISRSVKRLSDIVHSKGLTLNLI*HCYLNYNLTSYRTGWERRDVRALKLHAIGGKYSDLY 409
           L+  ++K+L +I     +  N+I + Y +YN +S  T W R +       +I   Y D  
Sbjct: 215 LMRLNLKKLPNITKPISVPQNIIDNFYRDYNASSKTTVWNRMESIDESHLSINDTYGDHI 274

Query: 408 SYDYF 394
             D+F
Sbjct: 275 MTDFF 279


>AE014135-127|AAN06510.1|  598|Drosophila melanogaster CG1838-PB,
           isoform B protein.
          Length = 598

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 18/65 (27%), Positives = 31/65 (47%)
 Frame = -3

Query: 588 LISRSVKRLSDIVHSKGLTLNLI*HCYLNYNLTSYRTGWERRDVRALKLHAIGGKYSDLY 409
           L+  ++K+L +I     +  N+I + Y +YN +S  T W R +       +I   Y D  
Sbjct: 215 LMRLNLKKLPNITKPISVPQNIIDNFYRDYNASSKTTVWNRMESIDESHLSINDTYGDHI 274

Query: 408 SYDYF 394
             D+F
Sbjct: 275 MTDFF 279


>AE014135-126|AAF59319.1|  598|Drosophila melanogaster CG1838-PA,
           isoform A protein.
          Length = 598

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 18/65 (27%), Positives = 31/65 (47%)
 Frame = -3

Query: 588 LISRSVKRLSDIVHSKGLTLNLI*HCYLNYNLTSYRTGWERRDVRALKLHAIGGKYSDLY 409
           L+  ++K+L +I     +  N+I + Y +YN +S  T W R +       +I   Y D  
Sbjct: 215 LMRLNLKKLPNITKPISVPQNIIDNFYRDYNASSKTTVWNRMESIDESHLSINDTYGDHI 274

Query: 408 SYDYF 394
             D+F
Sbjct: 275 MTDFF 279


>AF132814-1|AAD24472.1|  598|Drosophila melanogaster myoglianin
           protein.
          Length = 598

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 18/65 (27%), Positives = 31/65 (47%)
 Frame = -3

Query: 588 LISRSVKRLSDIVHSKGLTLNLI*HCYLNYNLTSYRTGWERRDVRALKLHAIGGKYSDLY 409
           L+  ++K+L +I     +  N+I + Y +YN +S  T W R +       +I   Y D  
Sbjct: 215 LMRLNLKKLPNITKPISVPQNIIDNFYRDYNASSKTTVWNRMESIDEFHLSINDTYGDHI 274

Query: 408 SYDYF 394
             D+F
Sbjct: 275 MTDFF 279


>AY113489-1|AAM29494.1|  427|Drosophila melanogaster RE47112p
           protein.
          Length = 427

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = -3

Query: 594 KRLISRSVKRLSDIVHSKGLTLNLI*HCYLNYNLTSYR--TGWERRD 460
           ++     +K LSD +HS+GL   +    Y NY    Y    G+E +D
Sbjct: 96  RKRFPNGIKALSDYIHSRGLKFGIY-EDYGNYTCAGYPGIIGYEEKD 141


>AE014134-1777|AAF52871.2|  413|Drosophila melanogaster CG5731-PA
           protein.
          Length = 413

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = -3

Query: 594 KRLISRSVKRLSDIVHSKGLTLNLI*HCYLNYNLTSYR--TGWERRD 460
           ++     +K LSD +HS+GL   +    Y NY    Y    G+E +D
Sbjct: 96  RKRFPNGIKALSDYIHSRGLKFGIY-EDYGNYTCAGYPGIIGYEEKD 141


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,425,641
Number of Sequences: 53049
Number of extensions: 468604
Number of successful extensions: 724
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 724
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)