Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1360
         (798 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.92 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.92 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.6  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.6 bits (51), Expect = 0.92
 Identities = 15/58 (25%), Positives = 26/58 (44%)
 Frame = -1

Query: 555 IFSTAEYSFSYCNIFVHKMQNSIYP*SQSGQVFFFCANNLHFYCVPANILCV*SHKFV 382
           +F T    F YC +   +  N+    +   +VFF   N +H Y     +L +  ++FV
Sbjct: 497 VFVTTYLMFDYCTVLRVQRFNNYQSLAHYLRVFFTVFNVVHCYLASELVLML-KNRFV 553


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.92
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = -3

Query: 586 FSAFFIFPHNYIFDC*ILVLIL*YF 512
           +SAF IF  + +F C +++L+  Y+
Sbjct: 216 YSAFIIFTIHLLFYCVLIILLCIYY 240


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = -1

Query: 579 PFLYFHIIIFSTAEYSFSYCNIFVHKMQNSIY 484
           P +   +I F+T  +SF YC       ++ +Y
Sbjct: 256 PIIIGCLIQFNTIVFSFCYCYYNSKMTKDGVY 287


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,860
Number of Sequences: 336
Number of extensions: 4178
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)