Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1359
(799 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 27 0.23
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 27 0.23
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 27 0.23
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 26 0.30
DQ855494-1|ABH88181.1| 99|Tribolium castaneum chemosensory pro... 26 0.40
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.92
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.92
DQ855492-1|ABH88179.1| 251|Tribolium castaneum chemosensory pro... 23 2.1
EU008544-1|ABS31131.1| 493|Tribolium castaneum cytochrome P450 ... 22 6.5
AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein. 22 6.5
AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory recept... 22 6.5
AM292355-1|CAL23167.1| 324|Tribolium castaneum gustatory recept... 22 6.5
AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory recept... 22 6.5
AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory recept... 22 6.5
AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory recept... 22 6.5
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 26.6 bits (56), Expect = 0.23
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 137 LTDLSRFLALVSKVL--IDDVTSPISTVFNCATFGRSSSV 250
L L+ FL LV++ L + D + T FNC F +SSV
Sbjct: 250 LLSLTVFLNLVAETLPQVSDAIPLLGTYFNCIMFMVASSV 289
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 26.6 bits (56), Expect = 0.23
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 137 LTDLSRFLALVSKVL--IDDVTSPISTVFNCATFGRSSSV 250
L L+ FL LV++ L + D + T FNC F +SSV
Sbjct: 250 LLSLTVFLNLVAETLPQVSDAIPLLGTYFNCIMFMVASSV 289
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 26.6 bits (56), Expect = 0.23
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 137 LTDLSRFLALVSKVL--IDDVTSPISTVFNCATFGRSSSV 250
L L+ FL LV++ L + D + T FNC F +SSV
Sbjct: 250 LLSLTVFLNLVAETLPQVSDAIPLLGTYFNCIMFMVASSV 289
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 26.2 bits (55), Expect = 0.30
Identities = 10/34 (29%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = -3
Query: 692 DCNCNTGYSVGFMCNATG--QCECLPGVIGEKCD 597
DC ++ G + G +C+C PG +G +C+
Sbjct: 263 DCRPGACHNNGTCLDKVGGFECKCPPGFVGPRCE 296
Score = 25.0 bits (52), Expect = 0.70
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = -3
Query: 689 CNCNTGYSVGFMCNATGQCECLPGVIGEKC 600
C+C+ GYS + +C+ P G C
Sbjct: 170 CHCSDGYSGSYCQTEINECDSAPCQNGGTC 199
Score = 25.0 bits (52), Expect = 0.70
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = -3
Query: 731 KCRTEKNV-KCSFSDCNCNTGYSVGFMCNATGQC--ECLPGVIGEKCDRCPE 585
+C E N C F +C+ G + C A+ +C + G+ E C+ PE
Sbjct: 501 RCDEECNTYACEFDGNDCSLGINPWANCTASTRCWEVFMDGICNEDCNN-PE 551
>DQ855494-1|ABH88181.1| 99|Tribolium castaneum chemosensory
protein 8 protein.
Length = 99
Score = 25.8 bits (54), Expect = 0.40
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = -3
Query: 653 CNATG-QCE-CLPGVIGEKCDRCPER 582
C+A G Q + LP +IG+ C+RC R
Sbjct: 45 CDALGNQIKGALPEIIGKNCERCDSR 70
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 24.6 bits (51), Expect = 0.92
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +2
Query: 137 LTDLSRFLALVSKVL--IDDVTSPISTVFNCATFGRSSSV 250
L L+ FL LV++ + D I T FNC F +SSV
Sbjct: 250 LLSLTVFLNLVAEKIPTTSDAVPLIGTYFNCIMFMVASSV 289
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 24.6 bits (51), Expect = 0.92
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +2
Query: 137 LTDLSRFLALVSKVL--IDDVTSPISTVFNCATFGRSSSV 250
L L+ FL LV++ + D I T FNC F +SSV
Sbjct: 250 LLSLTVFLNLVAEKIPTTSDAVPLIGTYFNCIMFMVASSV 289
>DQ855492-1|ABH88179.1| 251|Tribolium castaneum chemosensory
protein 6 protein.
Length = 251
Score = 23.4 bits (48), Expect = 2.1
Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
Frame = +2
Query: 269 GVAS*RTSPPCPVCYER--ENSLAD 337
GV S TSPP P+ R EN AD
Sbjct: 126 GVISTNTSPPSPILSNRFGENEEAD 150
>EU008544-1|ABS31131.1| 493|Tribolium castaneum cytochrome P450
protein.
Length = 493
Score = 21.8 bits (44), Expect = 6.5
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = +1
Query: 670 YPVLQLQSENEHFTFFSVLHLVYIYNINITLLWRY 774
+ V ++ +EN FT+ ++L + Y+ + L +Y
Sbjct: 326 HEVTEIYNENGEFTYENILGMKYLDMVISETLRKY 360
>AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein.
Length = 199
Score = 21.8 bits (44), Expect = 6.5
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = -3
Query: 638 QCECLPGVIGEKC 600
+C+C PG G+ C
Sbjct: 53 RCQCQPGFTGKYC 65
>AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory receptor
candidate 44 protein.
Length = 313
Score = 21.8 bits (44), Expect = 6.5
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +3
Query: 384 ITLKSIVSLASSALRSSTENIRASVHESHSRHPSCGIKTHL 506
I K + SSAL + ++E+H CGI+ H+
Sbjct: 120 IRTKVYLVYCSSALVLAAMTTFHLIYEAHGFSYKCGIQYHI 160
>AM292355-1|CAL23167.1| 324|Tribolium castaneum gustatory receptor
candidate 34 protein.
Length = 324
Score = 21.8 bits (44), Expect = 6.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 545 PKSYRLYSFFFITFL 589
PKS ++YSF +T L
Sbjct: 20 PKSNKIYSFLLLTTL 34
>AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory receptor
candidate 9 protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.5
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 706 FTFFSVLHLVYIYNINITLLWRYN 777
+ F L L I N+ IT +W YN
Sbjct: 206 YDIFKALVLQTI-NLQITFIWTYN 228
>AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory receptor
candidate 4 protein.
Length = 309
Score = 21.8 bits (44), Expect = 6.5
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +3
Query: 384 ITLKSIVSLASSALRSSTENIRASVHESHSRHPSCGIKTHL 506
I K + SSAL + ++E+H CGI+ H+
Sbjct: 116 IRTKVYLVYCSSALVLAAMTTFHLIYEAHGFSYKCGIQYHI 156
>AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory receptor
candidate 2 protein.
Length = 587
Score = 21.8 bits (44), Expect = 6.5
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 706 FTFFSVLHLVYIYNINITLLWRYN 777
+ F L L I N+ IT +W YN
Sbjct: 206 YDIFKALVLQTI-NLQITFIWTYN 228
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,980
Number of Sequences: 336
Number of extensions: 3982
Number of successful extensions: 20
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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